RNA–Protein interactions for RNA: ENST00000533350.1

PICALM-221, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 3

Gene PICALM, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-221ENST00000533350 WDR66Q8TBY9 1149 aa6.17□□□□□ -1.42
PICALM-221ENST00000533350 NSUN3Q9H649 340 aaKnown RBP6.17□□□□□ -1.42
PICALM-221ENST00000533350 DCP1AQ9NPI6 582 aaPredicted RBP6.17□□□□□ -1.42
PICALM-221ENST00000533350 APOBEC2Q9Y235 224 aaKnown RBP6.17□□□□□ -1.42
PICALM-221ENST00000533350 TRAF5O00463 557 aa6.16□□□□□ -1.42
PICALM-221ENST00000533350 MAN2B1O00754 1011 aa6.16□□□□□ -1.42
PICALM-221ENST00000533350 RAB11FIP3O75154 756 aa6.16□□□□□ -1.42
PICALM-221ENST00000533350 FKBP9O95302 570 aa6.16□□□□□ -1.42
PICALM-221ENST00000533350 CDK11BP21127 795 aaKnown RBP6.16□□□□□ -1.42
PICALM-221ENST00000533350 GJA4P35212 333 aa6.16□□□□□ -1.42
PICALM-221ENST00000533350 KIF11P52732 1056 aa6.16□□□□□ -1.42
PICALM-221ENST00000533350 ATP13A4Q4VNC1 1196 aa6.16□□□□□ -1.42
PICALM-221ENST00000533350 IQSEC1Q6DN90 963 aa6.16□□□□□ -1.42
PICALM-221ENST00000533350 FKBP9P1Q75LS8 142 aa6.16□□□□□ -1.42
PICALM-221ENST00000533350 STRA8Q7Z7C7 330 aa6.16□□□□□ -1.42
PICALM-221ENST00000533350 AFAP1L2Q8N4X5 818 aa6.16□□□□□ -1.42
PICALM-221ENST00000533350 CHTF18Q8WVB6 975 aa6.16□□□□□ -1.42
PICALM-221ENST00000533350 LIN37Q96GY3 246 aaPredicted RBP6.16□□□□□ -1.42
PICALM-221ENST00000533350 CEP89Q96ST8 783 aa6.16□□□□□ -1.42
PICALM-221ENST00000533350 EPB41L4BQ9H329 900 aa6.16□□□□□ -1.42
PICALM-221ENST00000533350 BCAS3Q9H6U6 928 aa6.16□□□□□ -1.42
PICALM-221ENST00000533350 SMURF1Q9HCE7 757 aa6.16□□□□□ -1.42
PICALM-221ENST00000533350 HOMER2Q9NSB8 354 aa6.16□□□□□ -1.42
PICALM-221ENST00000533350 FAM53CQ9NYF3 392 aa6.16□□□□□ -1.42
PICALM-221ENST00000533350 KLHL14Q9P2G3 628 aa6.16□□□□□ -1.42
PICALM-221ENST00000533350 ASH2LQ9UBL3 628 aa6.16□□□□□ -1.42
PICALM-221ENST00000533350 FAN1Q9Y2M0 1017 aa6.16□□□□□ -1.42
PICALM-221ENST00000533350 TCRBV5S2A0A599 114 aa6.15□□□□□ -1.42
PICALM-221ENST00000533350 FAM83GA6ND36 823 aa6.15□□□□□ -1.42
PICALM-221ENST00000533350 ZEB2O60315 1214 aa6.15□□□□□ -1.42
PICALM-221ENST00000533350 CLASP2O75122 1294 aaKnown RBP6.15□□□□□ -1.42
PICALM-221ENST00000533350 TADA3O75528 432 aa6.15□□□□□ -1.42
PICALM-221ENST00000533350 LTFP02788 710 aa6.15□□□□□ -1.42
PICALM-221ENST00000533350 AMY2AP04746 511 aa6.15□□□□□ -1.42
PICALM-221ENST00000533350 PTPN1P18031 435 aaKnown RBP6.15□□□□□ -1.42
PICALM-221ENST00000533350 AMY2BP19961 511 aa6.15□□□□□ -1.42
PICALM-221ENST00000533350 LSSP48449 732 aa6.15□□□□□ -1.42
PICALM-221ENST00000533350 SRSF3P84103 164 aaKnown RBP6.15□□□□□ -1.42
PICALM-221ENST00000533350 ZNF200P98182 395 aaPredicted RBP6.15□□□□□ -1.42
PICALM-221ENST00000533350 STAT4Q14765 748 aa6.15□□□□□ -1.42
PICALM-221ENST00000533350 MLANAQ16655 118 aa6.15□□□□□ -1.42
PICALM-221ENST00000533350 HHIPL2Q6UWX4 724 aa6.15□□□□□ -1.42
PICALM-221ENST00000533350 HDGFL2Q7Z4V5 671 aaPredicted RBP6.15□□□□□ -1.42
PICALM-221ENST00000533350 ZC3H18Q86VM9 953 aaKnown RBP6.15□□□□□ -1.42
PICALM-221ENST00000533350 KIAA1958Q8N8K9 716 aa6.15□□□□□ -1.42
PICALM-221ENST00000533350 TSPAN17Q96FV3 270 aa6.15□□□□□ -1.42
PICALM-221ENST00000533350 SCYL1Q96KG9 808 aa6.15□□□□□ -1.42
PICALM-221ENST00000533350 TOMM22Q9NS69 142 aa6.15□□□□□ -1.42
PICALM-221ENST00000533350 HCFC2Q9Y5Z7 792 aa6.15□□□□□ -1.42
PICALM-221ENST00000533350 TCRBV5S4A2TA0A5A2 114 aa6.14□□□□□ -1.43
PICALM-221ENST00000533350 LRRC10BA6NIK2 292 aa6.14□□□□□ -1.43
PICALM-221ENST00000533350 ALG1L2C9J202 215 aa6.14□□□□□ -1.43
PICALM-221ENST00000533350 NEMP1O14524 444 aa6.14□□□□□ -1.43
PICALM-221ENST00000533350 PAPLNO95428 1278 aa6.14□□□□□ -1.43
PICALM-221ENST00000533350 ATP2A2P16615 1042 aaKnown RBP6.14□□□□□ -1.43
PICALM-221ENST00000533350 SLC9A1P19634 815 aa6.14□□□□□ -1.43
PICALM-221ENST00000533350 ADCYAP1R1P41586 468 aa6.14□□□□□ -1.43
PICALM-221ENST00000533350 MECP2P51608 486 aaKnown RBP6.14□□□□□ -1.43
PICALM-221ENST00000533350 EVA1CP58658 441 aa6.14□□□□□ -1.43
PICALM-221ENST00000533350 DSG1Q02413 1049 aa6.14□□□□□ -1.43
PICALM-221ENST00000533350 FBLN7Q53RD9 439 aa6.14□□□□□ -1.43
PICALM-221ENST00000533350 HABP4Q5JVS0 413 aaKnown RBP6.14□□□□□ -1.43
PICALM-221ENST00000533350 RNF219Q5W0B1 726 aaPredicted RBP6.14□□□□□ -1.43
PICALM-221ENST00000533350 ETV3LQ6ZN32 361 aa6.14□□□□□ -1.43
PICALM-221ENST00000533350 SPATS2Q86XZ4 545 aaKnown RBP6.14□□□□□ -1.43
PICALM-221ENST00000533350 PRPF38AQ8NAV1 312 aaKnown RBP6.14□□□□□ -1.43
PICALM-221ENST00000533350 ARRDC4Q8NCT1 418 aa6.14□□□□□ -1.43
PICALM-221ENST00000533350 SMC1BQ8NDV3 1235 aa6.14□□□□□ -1.43
PICALM-221ENST00000533350 ERCC4Q92889 916 aaPredicted RBP6.14□□□□□ -1.43
PICALM-221ENST00000533350 TOE1Q96GM8 510 aaKnown RBP6.14□□□□□ -1.43
PICALM-221ENST00000533350 ORAI3Q9BRQ5 295 aa6.14□□□□□ -1.43
PICALM-221ENST00000533350 FAM126AQ9BYI3 521 aaPredicted RBP6.14□□□□□ -1.43
PICALM-221ENST00000533350 KCNH7Q9NS40 1196 aa6.14□□□□□ -1.43
PICALM-221ENST00000533350 OXSMQ9NWU1 459 aa6.14□□□□□ -1.43
PICALM-221ENST00000533350 BUB1BO60566 1050 aaPredicted RBP6.13□□□□□ -1.43
PICALM-221ENST00000533350 ULK1O75385 1050 aa6.13□□□□□ -1.43
PICALM-221ENST00000533350 PFKLP17858 780 aa6.13□□□□□ -1.43
PICALM-221ENST00000533350 VIPR1P32241 457 aa6.13□□□□□ -1.43
PICALM-221ENST00000533350 CDKN1CP49918 316 aaPredicted RBP6.13□□□□□ -1.43
PICALM-221ENST00000533350 GUCY2FP51841 1108 aa6.13□□□□□ -1.43
PICALM-221ENST00000533350 NKX3-2P78367 333 aa6.13□□□□□ -1.43
PICALM-221ENST00000533350 PAN2Q504Q3 1202 aaKnown RBP6.13□□□□□ -1.43
PICALM-221ENST00000533350 CD300LDQ6UXZ3 194 aa6.13□□□□□ -1.43
PICALM-221ENST00000533350 OTOP1Q7RTM1 612 aa6.13□□□□□ -1.43
PICALM-221ENST00000533350 FERMT3Q86UX7 667 aa6.13□□□□□ -1.43
PICALM-221ENST00000533350 AMIGO3Q86WK7 504 aa6.13□□□□□ -1.43
PICALM-221ENST00000533350 EFHBQ8N7U6 833 aa6.13□□□□□ -1.43
PICALM-221ENST00000533350 HIPK4Q8NE63 616 aa6.13□□□□□ -1.43
PICALM-221ENST00000533350 WDR48Q8TAF3 677 aa6.13□□□□□ -1.43
PICALM-221ENST00000533350 SH3RF2Q8TEC5 729 aa6.13□□□□□ -1.43
PICALM-221ENST00000533350 NGRNQ9NPE2 291 aaKnown RBP6.13□□□□□ -1.43
PICALM-221ENST00000533350 ACSS2Q9NR19 701 aa6.13□□□□□ -1.43
PICALM-221ENST00000533350 SPTLC3Q9NUV7 552 aa6.13□□□□□ -1.43
PICALM-221ENST00000533350 DTLQ9NZJ0 730 aa6.13□□□□□ -1.43
PICALM-221ENST00000533350 ARHGAP28Q9P2N2 729 aa6.13□□□□□ -1.43
PICALM-221ENST00000533350 FOXP2O15409 715 aa6.12□□□□□ -1.43
PICALM-221ENST00000533350 STAT5AP42229 794 aa6.12□□□□□ -1.43
PICALM-221ENST00000533350 ID4P47928 161 aa6.12□□□□□ -1.43
PICALM-221ENST00000533350 TARBP2Q15633 366 aaKnown RBP6.12□□□□□ -1.43
PICALM-221ENST00000533350 DDB1Q16531 1140 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms