RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 KPNA6O60684 536 aa12.76□□□□□ -0.37
GMDS-210ENST00000533279 FARP2O94887 1054 aaPredicted RBP12.76□□□□□ -0.37
GMDS-210ENST00000533279 C6orf222P0C671 652 aaPredicted RBP12.76□□□□□ -0.37
GMDS-210ENST00000533279 SMPD1P17405 629 aa12.76□□□□□ -0.37
GMDS-210ENST00000533279 CCT6AP40227 531 aaKnown RBP12.76□□□□□ -0.37
GMDS-210ENST00000533279 ACTR2P61160 394 aa12.76□□□□□ -0.37
GMDS-210ENST00000533279 UBE2HP62256 183 aa12.76□□□□□ -0.37
GMDS-210ENST00000533279 SEMA3FQ13275 785 aa12.76□□□□□ -0.37
GMDS-210ENST00000533279 ITGB3BPQ13352 177 aaPredicted RBP12.76□□□□□ -0.37
GMDS-210ENST00000533279 ZRSR1Q15695 479 aaKnown RBP12.76□□□□□ -0.37
GMDS-210ENST00000533279 DGKDQ16760 1214 aa12.76□□□□□ -0.37
GMDS-210ENST00000533279 TPRNQ4KMQ1 711 aa12.76□□□□□ -0.37
GMDS-210ENST00000533279 ADALQ6DHV7 355 aa12.76□□□□□ -0.37
GMDS-210ENST00000533279 RNF180Q86T96 592 aa12.76□□□□□ -0.37
GMDS-210ENST00000533279 CABP7Q86V35 215 aa12.76□□□□□ -0.37
GMDS-210ENST00000533279 C4orf32Q8N8J7 132 aa12.76□□□□□ -0.37
GMDS-210ENST00000533279 TMEM87AQ8NBN3 555 aa12.76□□□□□ -0.37
GMDS-210ENST00000533279 PPTC7Q8NI37 304 aa12.76□□□□□ -0.37
GMDS-210ENST00000533279 SH3TC2Q8TF17 1288 aa12.76□□□□□ -0.37
GMDS-210ENST00000533279 MRPS27Q92552 414 aaKnown RBP12.76□□□□□ -0.37
GMDS-210ENST00000533279 HAS1Q92839 578 aa12.76□□□□□ -0.37
GMDS-210ENST00000533279 EMID1Q96A84 441 aaPredicted RBP12.76□□□□□ -0.37
GMDS-210ENST00000533279 UIMC1Q96RL1 719 aa12.76□□□□□ -0.37
GMDS-210ENST00000533279 KATNBL1Q9H079 304 aa12.76□□□□□ -0.37
GMDS-210ENST00000533279 UNC45AQ9H3U1 944 aa12.76□□□□□ -0.37
GMDS-210ENST00000533279 XPNPEP3Q9NQH7 507 aa12.76□□□□□ -0.37
GMDS-210ENST00000533279 DISC1Q9NRI5 854 aa12.76□□□□□ -0.37
GMDS-210ENST00000533279 DDX20Q9UHI6 824 aaKnown RBP12.76□□□□□ -0.37
GMDS-210ENST00000533279 FBXO2Q9UK22 296 aaPredicted RBP12.76□□□□□ -0.37
GMDS-210ENST00000533279 PCDHA7Q9UN72 937 aa12.76□□□□□ -0.37
GMDS-210ENST00000533279 A0A1W2PQ27 194 aa12.75□□□□□ -0.37
GMDS-210ENST00000533279 A0A1W2PQ64 194 aa12.75□□□□□ -0.37
GMDS-210ENST00000533279 A0A1W2PQD8 194 aa12.75□□□□□ -0.37
GMDS-210ENST00000533279 POTEMA6NI47 508 aa12.75□□□□□ -0.37
GMDS-210ENST00000533279 SORBS3O60504 671 aa12.75□□□□□ -0.37
GMDS-210ENST00000533279 ATP9AO75110 1047 aa12.75□□□□□ -0.37
GMDS-210ENST00000533279 ARIH2O95376 493 aa12.75□□□□□ -0.37
GMDS-210ENST00000533279 P4HBP07237 508 aaKnown RBP12.75□□□□□ -0.37
GMDS-210ENST00000533279 CAPN2P17655 700 aa12.75□□□□□ -0.37
GMDS-210ENST00000533279 MUTP22033 750 aa12.75□□□□□ -0.37
GMDS-210ENST00000533279 EPHA7Q15375 998 aa12.75□□□□□ -0.37
GMDS-210ENST00000533279 MAP3K21Q5TCX8 1036 aa12.75□□□□□ -0.37
GMDS-210ENST00000533279 CKAP2LQ8IYA6 745 aa12.75□□□□□ -0.37
GMDS-210ENST00000533279 KCTD17Q8N5Z5 321 aa12.75□□□□□ -0.37
GMDS-210ENST00000533279 IGSF22Q8N9C0 903 aa12.75□□□□□ -0.37
GMDS-210ENST00000533279 PCSK9Q8NBP7 692 aaKnown RBP12.75□□□□□ -0.37
GMDS-210ENST00000533279 GLG1Q92896 1179 aa12.75□□□□□ -0.37
GMDS-210ENST00000533279 FAM167AQ96KS9 214 aa12.75□□□□□ -0.37
GMDS-210ENST00000533279 TMEM106CQ9BVX2 250 aa12.75□□□□□ -0.37
GMDS-210ENST00000533279 KATNAL1Q9BW62 490 aa12.75□□□□□ -0.37
GMDS-210ENST00000533279 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.75□□□□□ -0.37
GMDS-210ENST00000533279 CSRNP2Q9H175 543 aa12.75□□□□□ -0.37
GMDS-210ENST00000533279 TUFT1Q9NNX1 390 aa12.75□□□□□ -0.37
GMDS-210ENST00000533279 HOOK1Q9UJC3 728 aaKnown RBP12.75□□□□□ -0.37
GMDS-210ENST00000533279 VAV3Q9UKW4 847 aa12.75□□□□□ -0.37
GMDS-210ENST00000533279 KBTBD13C9JR72 458 aa12.74□□□□□ -0.37
GMDS-210ENST00000533279 EDIL3O43854 480 aa12.74□□□□□ -0.37
GMDS-210ENST00000533279 PRPF40AO75400 957 aaKnown RBP12.74□□□□□ -0.37
GMDS-210ENST00000533279 MBD3O95983 291 aa12.74□□□□□ -0.37
GMDS-210ENST00000533279 SUPT20HL2P0C7V6 817 aa12.74□□□□□ -0.37
GMDS-210ENST00000533279 CCND3P30281 292 aaPredicted RBP12.74□□□□□ -0.37
GMDS-210ENST00000533279 TCF7P36402 384 aaPredicted RBP12.74□□□□□ -0.37
GMDS-210ENST00000533279 QARSP47897 775 aaKnown RBP12.74□□□□□ -0.37
GMDS-210ENST00000533279 SLC26A2P50443 739 aa12.74□□□□□ -0.37
GMDS-210ENST00000533279 PSMC5P62195 406 aa12.74□□□□□ -0.37
GMDS-210ENST00000533279 CAP1Q01518 475 aa12.74□□□□□ -0.37
GMDS-210ENST00000533279 ARHGAP1Q07960 439 aa12.74□□□□□ -0.37
GMDS-210ENST00000533279 FSCN1Q16658 493 aaKnown RBP12.74□□□□□ -0.37
GMDS-210ENST00000533279 CEP57L1Q8IYX8 460 aa12.74□□□□□ -0.37
GMDS-210ENST00000533279 FSIP1Q8NA03 581 aa12.74□□□□□ -0.37
GMDS-210ENST00000533279 ARRDC4Q8NCT1 418 aa12.74□□□□□ -0.37
GMDS-210ENST00000533279 SYMPKQ92797 1274 aaKnown RBP12.74□□□□□ -0.37
GMDS-210ENST00000533279 RNF208Q9H0X6 261 aa12.74□□□□□ -0.37
GMDS-210ENST00000533279 SMARCAD1Q9H4L7 1026 aa12.74□□□□□ -0.37
GMDS-210ENST00000533279 ZSWIM4Q9H7M6 989 aa12.74□□□□□ -0.37
GMDS-210ENST00000533279 ZNF302Q9NR11 478 aa12.74□□□□□ -0.37
GMDS-210ENST00000533279 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.73□□□□□ -0.37
GMDS-210ENST00000533279 DHX15O43143 795 aaKnown RBP12.73□□□□□ -0.37
GMDS-210ENST00000533279 PPFIA4O75335 1185 aa12.73□□□□□ -0.37
GMDS-210ENST00000533279 IGHA2P01877 340 aa12.73□□□□□ -0.37
GMDS-210ENST00000533279 CCL5P13501 91 aa12.73□□□□□ -0.37
GMDS-210ENST00000533279 CMA1P23946 247 aa12.73□□□□□ -0.37
GMDS-210ENST00000533279 STAT6P42226 847 aa12.73□□□□□ -0.37
GMDS-210ENST00000533279 SP2Q02086 613 aa12.73□□□□□ -0.37
GMDS-210ENST00000533279 TRIM32Q13049 653 aa12.73□□□□□ -0.37
GMDS-210ENST00000533279 GNASQ5JWF2 1037 aa12.73□□□□□ -0.37
GMDS-210ENST00000533279 UTP14CQ5TAP6 766 aaKnown RBP12.73□□□□□ -0.37
GMDS-210ENST00000533279 RRAGBQ5VZM2 374 aa12.73□□□□□ -0.37
GMDS-210ENST00000533279 PDXDC2PQ6P474 469 aa12.73□□□□□ -0.37
GMDS-210ENST00000533279 OTUD6AQ7L8S5 288 aa12.73□□□□□ -0.37
GMDS-210ENST00000533279 IQUBQ8NA54 791 aa12.73□□□□□ -0.37
GMDS-210ENST00000533279 AFG1LQ8WV93 481 aa12.73□□□□□ -0.37
GMDS-210ENST00000533279 COPS5Q92905 334 aa12.73□□□□□ -0.37
GMDS-210ENST00000533279 GJA10Q969M2 543 aa12.73□□□□□ -0.37
GMDS-210ENST00000533279 CLIC6Q96NY7 704 aa12.73□□□□□ -0.37
GMDS-210ENST00000533279 GPR20Q99678 358 aa12.73□□□□□ -0.37
GMDS-210ENST00000533279 EIF2AK1Q9BQI3 630 aaKnown RBP12.73□□□□□ -0.37
GMDS-210ENST00000533279 POLR3CQ9BUI4 534 aaPredicted RBP12.73□□□□□ -0.37
GMDS-210ENST00000533279 LRRC27Q9C0I9 530 aa12.73□□□□□ -0.37
GMDS-210ENST00000533279 USP25Q9UHP3 1055 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms