RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 CYP2C19P33261 490 aa15.83■□□□□ 0.12
HIF3A-215ENST00000533145 LY6KQ17RY6 165 aa15.83■□□□□ 0.12
HIF3A-215ENST00000533145 DUSP28Q4G0W2 176 aa15.83■□□□□ 0.12
HIF3A-215ENST00000533145 HAUS3Q68CZ6 603 aa15.83■□□□□ 0.12
HIF3A-215ENST00000533145 NCAPH2Q6IBW4 605 aa15.83■□□□□ 0.12
HIF3A-215ENST00000533145 CYFIP1Q7L576 1253 aa15.83■□□□□ 0.12
HIF3A-215ENST00000533145 MIER3Q7Z3K6 550 aa15.83■□□□□ 0.12
HIF3A-215ENST00000533145 SNX29Q8TEQ0 813 aa15.83■□□□□ 0.12
HIF3A-215ENST00000533145 TRIB2Q92519 343 aa15.83■□□□□ 0.12
HIF3A-215ENST00000533145 EMID1Q96A84 441 aaPredicted RBP15.83■□□□□ 0.12
HIF3A-215ENST00000533145 CALML4Q96GE6 196 aa15.83■□□□□ 0.12
HIF3A-215ENST00000533145 EIF2AK1Q9BQI3 630 aaKnown RBP15.83■□□□□ 0.12
HIF3A-215ENST00000533145 NT5C3AQ9H0P0 336 aa15.83■□□□□ 0.12
HIF3A-215ENST00000533145 BCAS3Q9H6U6 928 aa15.83■□□□□ 0.12
HIF3A-215ENST00000533145 JPH1Q9HDC5 661 aaPredicted RBP15.83■□□□□ 0.12
HIF3A-215ENST00000533145 TUFT1Q9NNX1 390 aa15.83■□□□□ 0.12
HIF3A-215ENST00000533145 DISC1Q9NRI5 854 aa15.83■□□□□ 0.12
HIF3A-215ENST00000533145 DDX19AQ9NUU7 478 aaKnown RBP15.83■□□□□ 0.12
HIF3A-215ENST00000533145 PKD2L1Q9P0L9 805 aa15.83■□□□□ 0.12
HIF3A-215ENST00000533145 TCEAL9Q9UHQ7 104 aa15.83■□□□□ 0.12
HIF3A-215ENST00000533145 LOXHD1Q8IVV2 1947 aa15.83■□□□□ 0.12
HIF3A-215ENST00000533145 KDM3AQ9Y4C1 1321 aa15.83■□□□□ 0.12
HIF3A-215ENST00000533145 A0A087X0B3 334 aa15.82■□□□□ 0.12
HIF3A-215ENST00000533145 WDR64B1ANS9 1081 aa15.82■□□□□ 0.12
HIF3A-215ENST00000533145 POLR2DO15514 142 aaKnown RBP15.82■□□□□ 0.12
HIF3A-215ENST00000533145 SLITRK3O94933 977 aa15.82■□□□□ 0.12
HIF3A-215ENST00000533145 GGPS1O95749 300 aa15.82■□□□□ 0.12
HIF3A-215ENST00000533145 P4HBP07237 508 aaKnown RBP15.82■□□□□ 0.12
HIF3A-215ENST00000533145 SPATA31C1P0DKV0 1188 aa15.82■□□□□ 0.12
HIF3A-215ENST00000533145 GRB10Q13322 594 aa15.82■□□□□ 0.12
HIF3A-215ENST00000533145 KARSQ15046 597 aaKnown RBP15.82■□□□□ 0.12
HIF3A-215ENST00000533145 E2F4Q16254 413 aa15.82■□□□□ 0.12
HIF3A-215ENST00000533145 CCDC144BQ3MJ40 725 aa15.82■□□□□ 0.12
HIF3A-215ENST00000533145 TMEM119Q4V9L6 283 aa15.82■□□□□ 0.12
HIF3A-215ENST00000533145 ABHD15Q6UXT9 468 aa15.82■□□□□ 0.12
HIF3A-215ENST00000533145 CATSPER3Q86XQ3 398 aa15.82■□□□□ 0.12
HIF3A-215ENST00000533145 IQUBQ8NA54 791 aa15.82■□□□□ 0.12
HIF3A-215ENST00000533145 PNMA5Q96PV4 448 aa15.82■□□□□ 0.12
HIF3A-215ENST00000533145 CUEDC2Q9H467 287 aa15.82■□□□□ 0.12
HIF3A-215ENST00000533145 DACT1Q9NYF0 836 aa15.82■□□□□ 0.12
HIF3A-215ENST00000533145 Q9Y3F1 56 aa15.82■□□□□ 0.12
HIF3A-215ENST00000533145 PCDHA10Q9Y5I2 948 aa15.82■□□□□ 0.12
HIF3A-215ENST00000533145 IGKV6D-21A0A0A0MT36 114 aa15.81■□□□□ 0.12
HIF3A-215ENST00000533145 DDX39AO00148 427 aaKnown RBP15.81■□□□□ 0.12
HIF3A-215ENST00000533145 ADCY3O60266 1144 aa15.81■□□□□ 0.12
HIF3A-215ENST00000533145 MED24O75448 989 aa15.81■□□□□ 0.12
HIF3A-215ENST00000533145 GH1P01241 217 aa15.81■□□□□ 0.12
HIF3A-215ENST00000533145 CYBAP13498 195 aa15.81■□□□□ 0.12
HIF3A-215ENST00000533145 CCT6AP40227 531 aaKnown RBP15.81■□□□□ 0.12
HIF3A-215ENST00000533145 ADCYAP1R1P41586 468 aa15.81■□□□□ 0.12
HIF3A-215ENST00000533145 LBX1P52954 281 aa15.81■□□□□ 0.12
HIF3A-215ENST00000533145 ACTR2P61160 394 aa15.81■□□□□ 0.12
HIF3A-215ENST00000533145 LAMC2Q13753 1193 aa15.81■□□□□ 0.12
HIF3A-215ENST00000533145 LONRF3Q496Y0 759 aa15.81■□□□□ 0.12
HIF3A-215ENST00000533145 TPRNQ4KMQ1 711 aa15.81■□□□□ 0.12
HIF3A-215ENST00000533145 PRAMEF19Q5SWL8 479 aa15.81■□□□□ 0.12
HIF3A-215ENST00000533145 RRAGBQ5VZM2 374 aa15.81■□□□□ 0.12
HIF3A-215ENST00000533145 DHX37Q8IY37 1157 aaKnown RBP15.81■□□□□ 0.12
HIF3A-215ENST00000533145 SEPT1Q8WYJ6 367 aa15.81■□□□□ 0.12
HIF3A-215ENST00000533145 MLXIPQ9HAP2 919 aa15.81■□□□□ 0.12
HIF3A-215ENST00000533145 STK17AQ9UEE5 414 aa15.81■□□□□ 0.12
HIF3A-215ENST00000533145 TSKSQ9UJT2 592 aa15.81■□□□□ 0.12
HIF3A-215ENST00000533145 ZHX1Q9UKY1 873 aaPredicted RBP15.81■□□□□ 0.12
HIF3A-215ENST00000533145 FAM184BQ9ULE4 1060 aa15.81■□□□□ 0.12
HIF3A-215ENST00000533145 GNEQ9Y223 722 aaKnown RBP15.81■□□□□ 0.12
HIF3A-215ENST00000533145 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.8■□□□□ 0.12
HIF3A-215ENST00000533145 GSTTP1A0A1W2PQM5 241 aa15.8■□□□□ 0.12
HIF3A-215ENST00000533145 CHMP2AO43633 222 aa15.8■□□□□ 0.12
HIF3A-215ENST00000533145 ACTN4O43707 911 aaKnown RBP15.8■□□□□ 0.12
HIF3A-215ENST00000533145 LYPLA2O95372 231 aa15.8■□□□□ 0.12
HIF3A-215ENST00000533145 HMGCRP04035 888 aa15.8■□□□□ 0.12
HIF3A-215ENST00000533145 PSAPP07602 524 aa15.8■□□□□ 0.12
HIF3A-215ENST00000533145 SLFN14P0C7P3 912 aa15.8■□□□□ 0.12
HIF3A-215ENST00000533145 SMPD1P17405 629 aa15.8■□□□□ 0.12
HIF3A-215ENST00000533145 TNFAIP2Q03169 654 aa15.8■□□□□ 0.12
HIF3A-215ENST00000533145 ARHGAP1Q07960 439 aa15.8■□□□□ 0.12
HIF3A-215ENST00000533145 ECM1Q16610 540 aa15.8■□□□□ 0.12
HIF3A-215ENST00000533145 NAALADL2Q58DX5 795 aa15.8■□□□□ 0.12
HIF3A-215ENST00000533145 MAP3K21Q5TCX8 1036 aa15.8■□□□□ 0.12
HIF3A-215ENST00000533145 KANK3Q6NY19 840 aa15.8■□□□□ 0.12
HIF3A-215ENST00000533145 MIS18BP1Q6P0N0 1132 aa15.8■□□□□ 0.12
HIF3A-215ENST00000533145 KRBA2Q6ZNG9 492 aa15.8■□□□□ 0.12
HIF3A-215ENST00000533145 PDILTQ8N807 584 aa15.8■□□□□ 0.12
HIF3A-215ENST00000533145 SLAIN1Q8ND83 568 aa15.8■□□□□ 0.12
HIF3A-215ENST00000533145 RAET1EQ8TD07 263 aa15.8■□□□□ 0.12
HIF3A-215ENST00000533145 DYDC2Q96IM9 177 aa15.8■□□□□ 0.12
HIF3A-215ENST00000533145 PANK2Q9BZ23 570 aa15.8■□□□□ 0.12
HIF3A-215ENST00000533145 MAGEF1Q9HAY2 307 aa15.8■□□□□ 0.12
HIF3A-215ENST00000533145 DKC1O60832 514 aaKnown RBP eCLIP15.79■□□□□ 0.12
HIF3A-215ENST00000533145 KINO60870 393 aaKnown RBP15.79■□□□□ 0.12
HIF3A-215ENST00000533145 SUPT20HL2P0C7V6 817 aa15.79■□□□□ 0.12
HIF3A-215ENST00000533145 XRCC6P12956 609 aaKnown RBP eCLIP15.79■□□□□ 0.12
HIF3A-215ENST00000533145 PLCG1P19174 1290 aa15.79■□□□□ 0.12
HIF3A-215ENST00000533145 QARSP47897 775 aaKnown RBP15.79■□□□□ 0.12
HIF3A-215ENST00000533145 CTCFP49711 727 aaPredicted RBP15.79■□□□□ 0.12
HIF3A-215ENST00000533145 CACNB2Q08289 660 aaPredicted RBP15.79■□□□□ 0.12
HIF3A-215ENST00000533145 TMEM63BQ5T3F8 832 aa15.79■□□□□ 0.12
HIF3A-215ENST00000533145 SH3RF1Q7Z6J0 888 aa15.79■□□□□ 0.12
HIF3A-215ENST00000533145 C4orf19Q8IY42 314 aa15.79■□□□□ 0.12
HIF3A-215ENST00000533145 TRPV1Q8NER1 839 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms