RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 TREHO43280 583 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 PQBP1O60828 265 aaKnown RBP2.15□□□□□ -2.07
KNL1-211ENST00000533001 STAT3P40763 770 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 ALDH5A1P51649 535 aaPredicted RBP2.15□□□□□ -2.07
KNL1-211ENST00000533001 ZXDBP98169 803 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 TSHZ3Q63HK5 1081 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 FBXO11Q86XK2 927 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 TEX11Q8IYF3 940 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 RNPC3Q96LT9 517 aaKnown RBP2.15□□□□□ -2.07
KNL1-211ENST00000533001 TRAIPQ9BWF2 469 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 HIPK3Q9H422 1215 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 HDAC6Q9UBN7 1215 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 MTF2Q9Y483 593 aaPredicted RBP2.15□□□□□ -2.07
KNL1-211ENST00000533001 RAD50Q92878 1312 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 SPTBP11277 2137 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 SRGAP3O43295 1099 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 PLIN1O60240 522 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 UBXN2AP68543 259 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 ZXDAP98168 799 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 ITGB3BPQ13352 177 aaPredicted RBP2.15□□□□□ -2.07
KNL1-211ENST00000533001 LPIN1Q14693 890 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 ZMYM1Q5SVZ6 1142 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 USP17L2Q6R6M4 530 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 LRRC15Q8TF66 581 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 MYH16Q9H6N6 1097 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 DCTPP1Q9H773 170 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 FAM86C1Q9NVL1 165 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 WRAP73Q9P2S5 460 aaPredicted RBP2.15□□□□□ -2.07
KNL1-211ENST00000533001 EXOC6BQ9Y2D4 811 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 WDR19Q8NEZ3 1342 aa2.15□□□□□ -2.07
KNL1-211ENST00000533001 DOCK4Q8N1I0 1966 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 MMP1P03956 469 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 NF2P35240 595 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 AMHR2Q16671 573 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 FAM83BQ5T0W9 1011 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 RUFY4Q6ZNE9 571 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 GADL1Q6ZQY3 521 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 TLK2Q86UE8 772 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 RHPN1Q8TCX5 695 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 P2RX5Q93086 422 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 RSPRY1Q96DX4 576 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 ATP8A2Q9NTI2 1148 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 MRPL42Q9Y6G3 142 aaKnown RBP2.14□□□□□ -2.07
KNL1-211ENST00000533001 IGSF9BQ9UPX0 1349 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 TDRD6O60522 2096 aaKnown RBP2.14□□□□□ -2.07
KNL1-211ENST00000533001 A0A0D9SFI3 127 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 OTOL1A6NHN0 477 aaPredicted RBP2.14□□□□□ -2.07
KNL1-211ENST00000533001 K7ESF4 209 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 CD44P16070 742 aaKnown RBP2.14□□□□□ -2.07
KNL1-211ENST00000533001 AVPR2P30518 371 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 HOXA11P31270 313 aaPredicted RBP2.14□□□□□ -2.07
KNL1-211ENST00000533001 ST3GAL1Q11201 340 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 CCDC96Q2M329 555 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 PLA2G2CQ5R387 149 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 TRIM67Q6ZTA4 783 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 CLDN23Q96B33 292 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 AGXT2Q9BYV1 514 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 OSBPL3Q9H4L5 887 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 POMKQ9H5K3 350 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.14□□□□□ -2.07
KNL1-211ENST00000533001 COG5Q9UP83 839 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 ATP11BQ9Y2G3 1177 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 DCXO43602 365 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 ORC4O43929 436 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 FAM189A1O60320 539 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 MMP3P08254 477 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 TRIM50Q86XT4 487 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 MB21D1Q8N884 522 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 GATA6Q92908 595 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 COA7Q96BR5 231 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 IL17RAQ96F46 866 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 CNTNAP3BQ96NU0 1288 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 CNTNAP3Q9BZ76 1288 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 TCP11L1Q9NUJ3 509 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 TOR4AQ9NXH8 423 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 PRKAG3Q9UGI9 489 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 SALL2Q9Y467 1007 aaPredicted RBP2.14□□□□□ -2.07
KNL1-211ENST00000533001 DOCK10Q96BY6 2186 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 ENPP3O14638 875 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 GATMP50440 423 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 DSC1Q08554 894 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 PICALMQ13492 652 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 CAMK2BQ13554 666 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 PRPF38AQ8NAV1 312 aaKnown RBP2.14□□□□□ -2.07
KNL1-211ENST00000533001 MBOAT7Q96N66 472 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 PDCD2LQ9BRP1 358 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 CCDC8Q9H0W5 538 aaPredicted RBP2.14□□□□□ -2.07
KNL1-211ENST00000533001 GZF1Q9H116 711 aaPredicted RBP2.14□□□□□ -2.07
KNL1-211ENST00000533001 ERVK-5Q9HDB9 667 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 CACNA1CQ13936 2221 aa2.14□□□□□ -2.07
KNL1-211ENST00000533001 SACSQ9NZJ4 4579 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 GJB3O75712 270 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 TOP3BO95985 862 aaKnown RBP2.13□□□□□ -2.07
KNL1-211ENST00000533001 ICAM1P05362 532 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 UBA1P22314 1058 aaKnown RBP2.13□□□□□ -2.07
KNL1-211ENST00000533001 KCNA4P22459 653 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 ZNF543Q08ER8 600 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 CCDC85BQ15834 202 aaPredicted RBP2.13□□□□□ -2.07
KNL1-211ENST00000533001 FSCN1Q16658 493 aaKnown RBP2.13□□□□□ -2.07
KNL1-211ENST00000533001 ABCB5Q2M3G0 1257 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms