RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 FOXR2Q6PJQ5 311 aa19.83■□□□□ 0.76
UBXN1-213ENST00000532904 PPM1EQ8WY54 764 aa19.83■□□□□ 0.76
UBXN1-213ENST00000532904 CAVIN3Q969G5 261 aa19.83■□□□□ 0.76
UBXN1-213ENST00000532904 STIM2Q9P246 746 aa19.83■□□□□ 0.76
UBXN1-213ENST00000532904 HERC5Q9UII4 1024 aaKnown RBP19.83■□□□□ 0.76
UBXN1-213ENST00000532904 SSU72P8A0A1W2PR75 194 aa19.82■□□□□ 0.76
UBXN1-213ENST00000532904 ZBTB5O15062 677 aa19.82■□□□□ 0.76
UBXN1-213ENST00000532904 PAFAH1B1P43034 410 aa19.82■□□□□ 0.76
UBXN1-213ENST00000532904 NOP2P46087 812 aaKnown RBP19.82■□□□□ 0.76
UBXN1-213ENST00000532904 FXR2P51116 673 aaKnown RBP eCLIP19.82■□□□□ 0.76
UBXN1-213ENST00000532904 ALS2CLQ60I27 953 aa19.82■□□□□ 0.76
UBXN1-213ENST00000532904 LRRC55Q6ZSA7 311 aa19.82■□□□□ 0.76
UBXN1-213ENST00000532904 ARHGAP27Q6ZUM4 889 aa19.82■□□□□ 0.76
UBXN1-213ENST00000532904 HINFPQ9BQA5 517 aa19.82■□□□□ 0.76
UBXN1-213ENST00000532904 RIC8AQ9NPQ8 531 aa19.82■□□□□ 0.76
UBXN1-213ENST00000532904 COL4A5P29400 1685 aa19.82■□□□□ 0.76
UBXN1-213ENST00000532904 TXKP42681 527 aa19.82■□□□□ 0.76
UBXN1-213ENST00000532904 ABCB5Q2M3G0 1257 aa19.82■□□□□ 0.76
UBXN1-213ENST00000532904 GLE1Q53GS7 698 aaKnown RBP19.82■□□□□ 0.76
UBXN1-213ENST00000532904 FKBP1CQ5VVH2 108 aa19.82■□□□□ 0.76
UBXN1-213ENST00000532904 EFCAB13Q8IY85 973 aa19.82■□□□□ 0.76
UBXN1-213ENST00000532904 RNF10Q8N5U6 811 aaKnown RBP19.82■□□□□ 0.76
UBXN1-213ENST00000532904 MTMR14Q8NCE2 650 aa19.82■□□□□ 0.76
UBXN1-213ENST00000532904 GMCL1P1Q8NEA9 526 aa19.82■□□□□ 0.76
UBXN1-213ENST00000532904 AGBL3Q8NEM8 1001 aa19.82■□□□□ 0.76
UBXN1-213ENST00000532904 LARP4BQ92615 738 aaKnown RBP19.82■□□□□ 0.76
UBXN1-213ENST00000532904 TLR10Q9BXR5 811 aa19.82■□□□□ 0.76
UBXN1-213ENST00000532904 SALL4Q9UJQ4 1053 aa19.82■□□□□ 0.76
UBXN1-213ENST00000532904 SLC7A5Q01650 507 aa19.81■□□□□ 0.76
UBXN1-213ENST00000532904 ATP2B2Q01814 1243 aa19.81■□□□□ 0.76
UBXN1-213ENST00000532904 NNTQ13423 1086 aa19.81■□□□□ 0.76
UBXN1-213ENST00000532904 TTC31Q49AM3 519 aaPredicted RBP19.81■□□□□ 0.76
UBXN1-213ENST00000532904 CCDC125Q86Z20 511 aa19.81■□□□□ 0.76
UBXN1-213ENST00000532904 OGFOD1Q8N543 542 aa19.81■□□□□ 0.76
UBXN1-213ENST00000532904 FAM107BQ9H098 131 aa19.81■□□□□ 0.76
UBXN1-213ENST00000532904 GLT8D2Q9H1C3 349 aa19.81■□□□□ 0.76
UBXN1-213ENST00000532904 ZNF277Q9NRM2 450 aaPredicted RBP19.81■□□□□ 0.76
UBXN1-213ENST00000532904 TSKSQ9UJT2 592 aa19.81■□□□□ 0.76
UBXN1-213ENST00000532904 ZNRF3Q9ULT6 936 aa19.81■□□□□ 0.76
UBXN1-213ENST00000532904 RBAK-RBAKDNI3L0D1 243 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 NCK2O43639 380 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 CXCR5P32302 372 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 MATR3P43243 847 aaKnown RBP eCLIP19.8■□□□□ 0.76
UBXN1-213ENST00000532904 ICA1Q05084 483 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 PSMD2Q13200 908 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 SEPT2Q15019 361 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 CALCRLQ16602 461 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 KLHDC7AQ5VTJ3 777 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 TTBK2Q6IQ55 1244 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 SIAH1Q8IUQ4 282 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 TSEN2Q8NCE0 465 aaKnown RBP19.8■□□□□ 0.76
UBXN1-213ENST00000532904 NOX5Q96PH1 765 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 CAPS2Q9BXY5 557 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 SMARCAL1Q9NZC9 954 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 PIM2Q9P1W9 311 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 RNF14Q9UBS8 474 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 BIN2Q9UBW5 565 aaPredicted RBP19.8■□□□□ 0.76
UBXN1-213ENST00000532904 BRCA1P38398 1863 aaKnown RBP19.8■□□□□ 0.76
UBXN1-213ENST00000532904 FER1L6Q2WGJ9 1857 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 FAM196BA6NMK8 535 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 CPP00450 1065 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 SLURP2P0DP57 97 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 EHHADHQ08426 723 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 DLGAP5Q15398 846 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 HGSNATQ68CP4 663 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 DYMQ7RTS9 669 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 FAM151AQ8WW52 585 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 RAD54LQ92698 747 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 COA7Q96BR5 231 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 CDK5RAP3Q96JB5 506 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 EHD2Q9NZN4 543 aa19.8■□□□□ 0.76
UBXN1-213ENST00000532904 RAD17O75943 681 aa19.79■□□□□ 0.76
UBXN1-213ENST00000532904 SLC1A4P43007 532 aa19.79■□□□□ 0.76
UBXN1-213ENST00000532904 GFPT1Q06210 699 aaPredicted RBP19.79■□□□□ 0.76
UBXN1-213ENST00000532904 TMEM266Q2M3C6 531 aa19.79■□□□□ 0.76
UBXN1-213ENST00000532904 SLFN13Q68D06 897 aa19.79■□□□□ 0.76
UBXN1-213ENST00000532904 C8orf74Q6P047 294 aa19.79■□□□□ 0.76
UBXN1-213ENST00000532904 PACS2Q86VP3 889 aa19.79■□□□□ 0.76
UBXN1-213ENST00000532904 NIM1KQ8IY84 436 aa19.79■□□□□ 0.76
UBXN1-213ENST00000532904 GMCL1Q96IK5 515 aa19.79■□□□□ 0.76
UBXN1-213ENST00000532904 CSRNP1Q96S65 589 aa19.79■□□□□ 0.76
UBXN1-213ENST00000532904 PSMB7Q99436 277 aa19.79■□□□□ 0.76
UBXN1-213ENST00000532904 TSG101Q99816 390 aa19.79■□□□□ 0.76
UBXN1-213ENST00000532904 LRRC27Q9C0I9 530 aa19.79■□□□□ 0.76
UBXN1-213ENST00000532904 TMEM260Q9NX78 707 aa19.79■□□□□ 0.76
UBXN1-213ENST00000532904 ZNF70Q9UC06 446 aaPredicted RBP19.79■□□□□ 0.76
UBXN1-213ENST00000532904 GRIN2DO15399 1336 aa19.79■□□□□ 0.76
UBXN1-213ENST00000532904 ANKRD65E5RJM6 399 aa19.79■□□□□ 0.76
UBXN1-213ENST00000532904 EIF3HO15372 352 aaKnown RBP eCLIP19.79■□□□□ 0.76
UBXN1-213ENST00000532904 HSF2BPO75031 334 aa19.79■□□□□ 0.76
UBXN1-213ENST00000532904 CLK2P49760 499 aaKnown RBP19.79■□□□□ 0.76
UBXN1-213ENST00000532904 MRPS25P82663 173 aaKnown RBP19.79■□□□□ 0.76
UBXN1-213ENST00000532904 SKOR1P84550 965 aa19.79■□□□□ 0.76
UBXN1-213ENST00000532904 RASSF7Q02833 373 aa19.79■□□□□ 0.76
UBXN1-213ENST00000532904 KCNMA1Q12791 1236 aa19.79■□□□□ 0.76
UBXN1-213ENST00000532904 PDIA5Q14554 519 aa19.79■□□□□ 0.76
UBXN1-213ENST00000532904 SPDYE2Q495Y8 402 aa19.79■□□□□ 0.76
UBXN1-213ENST00000532904 RBM26Q5T8P6 1007 aaKnown RBP19.79■□□□□ 0.76
UBXN1-213ENST00000532904 KCTD1Q719H9 257 aa19.79■□□□□ 0.76
UBXN1-213ENST00000532904 CACNA2D4Q7Z3S7 1137 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms