RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 DDX39AO00148 427 aaKnown RBP12.41□□□□□ -0.42
NXF1-211ENST00000531709 EIF3HO15372 352 aaKnown RBP eCLIP12.41□□□□□ -0.429e-8■■■□□ 18.9
NXF1-211ENST00000531709 CFBP00751 764 aa12.41□□□□□ -0.42
NXF1-211ENST00000531709 MAP2K1Q02750 393 aaPredicted RBP12.41□□□□□ -0.42
NXF1-211ENST00000531709 ADGRF4Q8IZF3 695 aa12.41□□□□□ -0.42
NXF1-211ENST00000531709 RNF10Q8N5U6 811 aaKnown RBP12.41□□□□□ -0.42
NXF1-211ENST00000531709 TSEN2Q8NCE0 465 aaKnown RBP12.41□□□□□ -0.42
NXF1-211ENST00000531709 NARFQ9UHQ1 456 aa12.41□□□□□ -0.42
NXF1-211ENST00000531709 NOVA2Q9UNW9 492 aaKnown RBP12.41□□□□□ -0.42
NXF1-211ENST00000531709 KCPQ6ZWJ8 1503 aa12.41□□□□□ -0.42
NXF1-211ENST00000531709 A0A1W2PQJ5 194 aa12.4□□□□□ -0.42
NXF1-211ENST00000531709 SLC9A1P19634 815 aa12.4□□□□□ -0.42
NXF1-211ENST00000531709 UBXN2AP68543 259 aa12.4□□□□□ -0.42
NXF1-211ENST00000531709 DHX9Q08211 1270 aaKnown RBP12.4□□□□□ -0.42
NXF1-211ENST00000531709 CETN1Q12798 172 aa12.4□□□□□ -0.42
NXF1-211ENST00000531709 CTTNBP2NLQ9P2B4 639 aa12.4□□□□□ -0.42
NXF1-211ENST00000531709 PNMA6FA0A0J9YX94 578 aa12.4□□□□□ -0.42
NXF1-211ENST00000531709 LRRN2O75325 713 aa12.4□□□□□ -0.42
NXF1-211ENST00000531709 AFPP02771 609 aaKnown RBP12.4□□□□□ -0.42
NXF1-211ENST00000531709 VIMP08670 466 aaKnown RBP12.4□□□□□ -0.42
NXF1-211ENST00000531709 GRAPQ13588 217 aa12.4□□□□□ -0.42
NXF1-211ENST00000531709 KCNK18Q7Z418 384 aa12.4□□□□□ -0.42
NXF1-211ENST00000531709 SPICE1Q8N0Z3 855 aa12.4□□□□□ -0.42
NXF1-211ENST00000531709 GRAPLQ8TC17 118 aaPredicted RBP12.4□□□□□ -0.42
NXF1-211ENST00000531709 ARHGEF1Q92888 912 aaKnown RBP12.4□□□□□ -0.42
NXF1-211ENST00000531709 BHMT2Q9H2M3 363 aa12.4□□□□□ -0.42
NXF1-211ENST00000531709 EFCC1Q9HA90 598 aa12.4□□□□□ -0.42
NXF1-211ENST00000531709 GCNT4Q9P109 453 aa12.4□□□□□ -0.42
NXF1-211ENST00000531709 RNF14Q9UBS8 474 aa12.4□□□□□ -0.42
NXF1-211ENST00000531709 FRMD4BQ9Y2L6 1034 aa12.4□□□□□ -0.42
NXF1-211ENST00000531709 TNS2Q63HR2 1409 aa12.4□□□□□ -0.42
NXF1-211ENST00000531709 PGRMC1O00264 195 aaKnown RBP12.4□□□□□ -0.42
NXF1-211ENST00000531709 FAM153BP0C7A2 387 aa12.4□□□□□ -0.42
NXF1-211ENST00000531709 ZYXQ15942 572 aaKnown RBP12.4□□□□□ -0.42
NXF1-211ENST00000531709 FAM153CQ494X1 144 aa12.4□□□□□ -0.42
NXF1-211ENST00000531709 FAM196AQ6ZSG2 479 aa12.4□□□□□ -0.42
NXF1-211ENST00000531709 TLR10Q9BXR5 811 aa12.4□□□□□ -0.42
NXF1-211ENST00000531709 AMACRQ9UHK6 382 aa12.4□□□□□ -0.42
NXF1-211ENST00000531709 FAM153AQ9UHL3 310 aa12.4□□□□□ -0.42
NXF1-211ENST00000531709 GSTTP1A0A1W2PQM5 241 aa12.39□□□□□ -0.43
NXF1-211ENST00000531709 PDHBP11177 359 aa12.39□□□□□ -0.43
NXF1-211ENST00000531709 TBC1D10BQ4KMP7 808 aaPredicted RBP12.39□□□□□ -0.43
NXF1-211ENST00000531709 PACS2Q86VP3 889 aa12.39□□□□□ -0.43
NXF1-211ENST00000531709 PIGOQ8TEQ8 1089 aa12.39□□□□□ -0.43
NXF1-211ENST00000531709 RBM17Q96I25 401 aaKnown RBP12.39□□□□□ -0.43
NXF1-211ENST00000531709 BCS1LQ9Y276 419 aa12.39□□□□□ -0.43
NXF1-211ENST00000531709 RAD51CO43502 376 aa12.39□□□□□ -0.43
NXF1-211ENST00000531709 EXOC3O60645 756 aa12.39□□□□□ -0.43
NXF1-211ENST00000531709 HOXA13P31271 388 aaPredicted RBP12.39□□□□□ -0.43
NXF1-211ENST00000531709 SLC18A3Q16572 532 aa12.39□□□□□ -0.43
NXF1-211ENST00000531709 GLE1Q53GS7 698 aaKnown RBP12.39□□□□□ -0.43
NXF1-211ENST00000531709 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.39□□□□□ -0.43
NXF1-211ENST00000531709 SFR1Q86XK3 245 aa12.39□□□□□ -0.43
NXF1-211ENST00000531709 KIAA0825Q8IV33 1275 aa12.39□□□□□ -0.43
NXF1-211ENST00000531709 FLT1P17948 1338 aa12.39□□□□□ -0.43
NXF1-211ENST00000531709 RNPC3Q96LT9 517 aaKnown RBP12.39□□□□□ -0.43
NXF1-211ENST00000531709 BLOC1S4Q9NUP1 217 aa12.39□□□□□ -0.43
NXF1-211ENST00000531709 CCDC172P0C7W6 258 aa12.39□□□□□ -0.43
NXF1-211ENST00000531709 AARSP49588 968 aaKnown RBP eCLIP12.39□□□□□ -0.43
NXF1-211ENST00000531709 PLTPP55058 493 aa12.39□□□□□ -0.43
NXF1-211ENST00000531709 KLHDC7AQ5VTJ3 777 aa12.39□□□□□ -0.43
NXF1-211ENST00000531709 SLFN13Q68D06 897 aa12.39□□□□□ -0.43
NXF1-211ENST00000531709 PROM2Q8N271 834 aa12.39□□□□□ -0.43
NXF1-211ENST00000531709 DAGLBQ8NCG7 672 aa12.39□□□□□ -0.43
NXF1-211ENST00000531709 WHAMMQ8TF30 809 aa12.39□□□□□ -0.43
NXF1-211ENST00000531709 TBC1D22AQ8WUA7 517 aa12.39□□□□□ -0.43
NXF1-211ENST00000531709 MARF1Q9Y4F3 1742 aaKnown RBP12.38□□□□□ -0.43
NXF1-211ENST00000531709 SPEF2Q9C093 1822 aa12.38□□□□□ -0.43
NXF1-211ENST00000531709 KIF1AQ12756 1690 aa12.38□□□□□ -0.43
NXF1-211ENST00000531709 FGGP02679 453 aa12.38□□□□□ -0.43
NXF1-211ENST00000531709 GPSM2P81274 684 aa12.38□□□□□ -0.43
NXF1-211ENST00000531709 SLC51AQ86UW1 340 aa12.38□□□□□ -0.43
NXF1-211ENST00000531709 PNMA5Q96PV4 448 aa12.38□□□□□ -0.43
NXF1-211ENST00000531709 SSU72P8A0A1W2PR75 194 aa12.38□□□□□ -0.43
NXF1-211ENST00000531709 DAPK3O43293 454 aa12.38□□□□□ -0.43
NXF1-211ENST00000531709 PTK2Q05397 1052 aa12.38□□□□□ -0.43
NXF1-211ENST00000531709 FIGNQ5HY92 759 aa12.38□□□□□ -0.43
NXF1-211ENST00000531709 STXBP4Q6ZWJ1 553 aa12.38□□□□□ -0.43
NXF1-211ENST00000531709 SYCE1Q8N0S2 351 aa12.38□□□□□ -0.43
NXF1-211ENST00000531709 AENQ8WTP8 325 aaKnown RBP12.38□□□□□ -0.43
NXF1-211ENST00000531709 TAOK3Q9H2K8 898 aa12.38□□□□□ -0.43
NXF1-211ENST00000531709 MTMR4Q9NYA4 1195 aa12.38□□□□□ -0.43
NXF1-211ENST00000531709 MYH2Q9UKX2 1941 aa12.38□□□□□ -0.43
NXF1-211ENST00000531709 SART1O43290 800 aaKnown RBP12.38□□□□□ -0.43
NXF1-211ENST00000531709 RPS6KA4O75676 772 aa12.38□□□□□ -0.43
NXF1-211ENST00000531709 ATP2B4P23634 1241 aa12.38□□□□□ -0.43
NXF1-211ENST00000531709 IFNAR2P48551 515 aa12.38□□□□□ -0.43
NXF1-211ENST00000531709 SF3B2Q13435 895 aaKnown RBP12.38□□□□□ -0.43
NXF1-211ENST00000531709 MSL1Q68DK7 614 aa12.38□□□□□ -0.43
NXF1-211ENST00000531709 MGARPQ8TDB4 240 aa12.38□□□□□ -0.43
NXF1-211ENST00000531709 JPH2Q9BR39 696 aaPredicted RBP12.38□□□□□ -0.43
NXF1-211ENST00000531709 RASAL2Q9UJF2 1139 aa12.38□□□□□ -0.43
NXF1-211ENST00000531709 NID2Q14112 1375 aa12.38□□□□□ -0.43
NXF1-211ENST00000531709 SPOPO43791 374 aa12.37□□□□□ -0.43
NXF1-211ENST00000531709 BUB1BO60566 1050 aaPredicted RBP12.37□□□□□ -0.43
NXF1-211ENST00000531709 SLCO1A2P46721 670 aa12.37□□□□□ -0.43
NXF1-211ENST00000531709 ZNF211Q13398 564 aaPredicted RBP12.37□□□□□ -0.43
NXF1-211ENST00000531709 PDIA5Q14554 519 aa12.37□□□□□ -0.43
NXF1-211ENST00000531709 TRADDQ15628 312 aa12.37□□□□□ -0.43
NXF1-211ENST00000531709 MMS22LQ6ZRQ5 1243 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms