RNA–Protein interactions for RNA: ENST00000531131.1

NXF1-208, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2 BASIC

Gene NXF1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-208ENST00000531131 ZNF286BP0CG31 522 aa12.93□□□□□ -0.34
NXF1-208ENST00000531131 RAG1P15918 1043 aa12.93□□□□□ -0.34
NXF1-208ENST00000531131 SYN1P17600 705 aa12.93□□□□□ -0.34
NXF1-208ENST00000531131 BMP8BP34820 402 aa12.93□□□□□ -0.34
NXF1-208ENST00000531131 ACTR2P61160 394 aa12.93□□□□□ -0.34
NXF1-208ENST00000531131 KRT76Q01546 638 aa12.93□□□□□ -0.34
NXF1-208ENST00000531131 SP4Q02446 784 aa12.93□□□□□ -0.34
NXF1-208ENST00000531131 ITGB3BPQ13352 177 aaPredicted RBP12.93□□□□□ -0.34
NXF1-208ENST00000531131 FAM47CQ5HY64 1035 aa12.93□□□□□ -0.34
NXF1-208ENST00000531131 ZNF746Q6NUN9 644 aaPredicted RBP12.93□□□□□ -0.34
NXF1-208ENST00000531131 TNPO1Q92973 898 aaKnown RBP12.93□□□□□ -0.34
NXF1-208ENST00000531131 TRIM43Q96BQ3 446 aaPredicted RBP12.93□□□□□ -0.34
NXF1-208ENST00000531131 FOXP1Q9H334 677 aaPredicted RBP12.93□□□□□ -0.34
NXF1-208ENST00000531131 SMARCAD1Q9H4L7 1026 aa12.93□□□□□ -0.34
NXF1-208ENST00000531131 AZI2Q9H6S1 392 aa12.93□□□□□ -0.34
NXF1-208ENST00000531131 GTF2IRD1Q9UHL9 959 aa12.93□□□□□ -0.34
NXF1-208ENST00000531131 TBX21Q9UL17 535 aa12.93□□□□□ -0.34
NXF1-208ENST00000531131 EMSYQ7Z589 1322 aa12.92□□□□□ -0.34
NXF1-208ENST00000531131 TBX3O15119 743 aa12.92□□□□□ -0.34
NXF1-208ENST00000531131 MSH4O15457 936 aa12.92□□□□□ -0.34
NXF1-208ENST00000531131 LGR5O75473 907 aa12.92□□□□□ -0.34
NXF1-208ENST00000531131 TIMP1P01033 207 aa12.92□□□□□ -0.34
NXF1-208ENST00000531131 GNAT1P11488 350 aa12.92□□□□□ -0.34
NXF1-208ENST00000531131 SLC26A2P50443 739 aa12.92□□□□□ -0.34
NXF1-208ENST00000531131 NR5A1Q13285 461 aa12.92□□□□□ -0.34
NXF1-208ENST00000531131 CUL4AQ13619 759 aa12.92□□□□□ -0.34
NXF1-208ENST00000531131 LETM2Q2VYF4 491 aa12.92□□□□□ -0.34
NXF1-208ENST00000531131 PLPPR4Q7Z2D5 763 aa12.92□□□□□ -0.34
NXF1-208ENST00000531131 SH3RF1Q7Z6J0 888 aa12.92□□□□□ -0.34
NXF1-208ENST00000531131 SMAP1Q8IYB5 467 aaPredicted RBP12.92□□□□□ -0.34
NXF1-208ENST00000531131 SLC5A5Q92911 643 aa12.92□□□□□ -0.34
NXF1-208ENST00000531131 FAM20AQ96MK3 541 aa12.92□□□□□ -0.34
NXF1-208ENST00000531131 GDF15Q99988 308 aa12.92□□□□□ -0.34
NXF1-208ENST00000531131 TRPV6Q9H1D0 765 aa12.92□□□□□ -0.34
NXF1-208ENST00000531131 ERAP1Q9NZ08 941 aa12.92□□□□□ -0.34
NXF1-208ENST00000531131 DDX25Q9UHL0 483 aaKnown RBP12.92□□□□□ -0.34
NXF1-208ENST00000531131 SMC3Q9UQE7 1217 aa12.92□□□□□ -0.34
NXF1-208ENST00000531131 MYH9P35579 1960 aaKnown RBP12.91□□□□□ -0.34
NXF1-208ENST00000531131 IGKV6D-21A0A0A0MT36 114 aa12.91□□□□□ -0.34
NXF1-208ENST00000531131 A0A1W2PPC1 479 aa12.91□□□□□ -0.34
NXF1-208ENST00000531131 TDP2O95551 362 aa12.91□□□□□ -0.34
NXF1-208ENST00000531131 CHMP4BP1P59074 171 aa12.91□□□□□ -0.34
NXF1-208ENST00000531131 PTGISQ16647 500 aa12.91□□□□□ -0.34
NXF1-208ENST00000531131 UTP14CQ5TAP6 766 aaKnown RBP12.91□□□□□ -0.34
NXF1-208ENST00000531131 MIS18BP1Q6P0N0 1132 aa12.91□□□□□ -0.34
NXF1-208ENST00000531131 GLG1Q92896 1179 aa12.91□□□□□ -0.34
NXF1-208ENST00000531131 SNX21Q969T3 373 aa12.91□□□□□ -0.34
NXF1-208ENST00000531131 TRMT13Q9NUP7 481 aaKnown RBP12.91□□□□□ -0.34
NXF1-208ENST00000531131 HDAC6Q9UBN7 1215 aa12.91□□□□□ -0.34
NXF1-208ENST00000531131 NOD1Q9Y239 953 aa12.91□□□□□ -0.34
NXF1-208ENST00000531131 NRCAMQ92823 1304 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 LTBP2Q14767 1821 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 K7ELQ4 463 aaPredicted RBP12.9□□□□□ -0.34
NXF1-208ENST00000531131 PITPNM1O00562 1244 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 CCNT1O60563 726 aaKnown RBP12.9□□□□□ -0.34
NXF1-208ENST00000531131 GAS7O60861 476 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 PSMD10O75832 226 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 CCNE2O96020 404 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 U2AF2P26368 475 aaKnown RBP eCLIP12.9□□□□□ -0.349e-10■■■□□ 17.4
NXF1-208ENST00000531131 GJB2P29033 226 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 HOXC8P31273 242 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 SFNP31947 248 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 MAGEA10P43363 369 aaPredicted RBP12.9□□□□□ -0.34
NXF1-208ENST00000531131 STAT5BP51692 787 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 JAK3P52333 1124 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 FOSBP53539 338 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 GUCY1B3Q02153 619 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 ORC2Q13416 577 aaPredicted RBP12.9□□□□□ -0.34
NXF1-208ENST00000531131 GNL2Q13823 731 aaKnown RBP12.9□□□□□ -0.34
NXF1-208ENST00000531131 LRCH2Q5VUJ6 765 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 FAM160B1Q5W0V3 765 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 GDF6Q6KF10 455 aaPredicted RBP12.9□□□□□ -0.34
NXF1-208ENST00000531131 MFSD5Q6N075 450 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 ABHD15Q6UXT9 468 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 SLFN12Q8IYM2 578 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 TMEM199Q8N511 208 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 CCDC155Q8N6L0 562 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 RDM1Q8NG50 284 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 ETNPPLQ8TBG4 499 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 AFAP1L1Q8TED9 768 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 INTS4Q96HW7 963 aaKnown RBP12.9□□□□□ -0.34
NXF1-208ENST00000531131 TEKT3Q9BXF9 490 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 PRO3102Q9H379 93 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 HIPK3Q9H422 1215 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 TELO2Q9Y4R8 837 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 PCDHA10Q9Y5I2 948 aa12.9□□□□□ -0.34
NXF1-208ENST00000531131 TRIP12Q14669 1992 aaPredicted RBP12.89□□□□□ -0.35
NXF1-208ENST00000531131 C17orf102A2RUQ5 167 aa12.89□□□□□ -0.35
NXF1-208ENST00000531131 WDR64B1ANS9 1081 aa12.89□□□□□ -0.35
NXF1-208ENST00000531131 DDX39AO00148 427 aaKnown RBP12.89□□□□□ -0.35
NXF1-208ENST00000531131 BAG4O95429 457 aaKnown RBP12.89□□□□□ -0.35
NXF1-208ENST00000531131 PSAPP07602 524 aa12.89□□□□□ -0.35
NXF1-208ENST00000531131 SMIM10L2AP0DMW4 78 aa12.89□□□□□ -0.35
NXF1-208ENST00000531131 SMIM10L2BP0DMW5 78 aa12.89□□□□□ -0.35
NXF1-208ENST00000531131 PDCP20941 246 aa12.89□□□□□ -0.35
NXF1-208ENST00000531131 TRAPPC10P48553 1259 aa12.89□□□□□ -0.35
NXF1-208ENST00000531131 FXR1P51114 621 aaKnown RBP eCLIP12.89□□□□□ -0.35
NXF1-208ENST00000531131 RBL2Q08999 1139 aa12.89□□□□□ -0.35
NXF1-208ENST00000531131 PTK7Q13308 1070 aa12.89□□□□□ -0.35
NXF1-208ENST00000531131 BFSP2Q13515 415 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms