RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 NKX1-2Q9UD57 310 aaPredicted RBP8.88□□□□□ -0.99
CSDE1-214ENST00000530886 PRKAG3Q9UGI9 489 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 PLAGL2Q9UPG8 496 aa8.88□□□□□ -0.99
CSDE1-214ENST00000530886 MYH3P11055 1940 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 WNK3Q9BYP7 1800 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 PNPLA7Q6ZV29 1317 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 F8VZ95 297 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 RBAK-RBAKDNI3L0D1 243 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 SMAPO00193 183 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 RAD51CO43502 376 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 FGAP02671 866 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 ZBTB48P10074 688 aaPredicted RBP8.87□□□□□ -0.99
CSDE1-214ENST00000530886 CHN1P15882 459 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 OCRLQ01968 901 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 MPP3Q13368 585 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 ENOX2Q16206 610 aaKnown RBP8.87□□□□□ -0.99
CSDE1-214ENST00000530886 TMC3Q7Z5M5 1100 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 SMC1BQ8NDV3 1235 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 GATA6Q92908 595 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 NEUROD6Q96NK8 337 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 LRMDAQ9H2I8 198 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 MLXIPQ9HAP2 919 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 PCDH18Q9HCL0 1135 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 TRPV5Q9NQA5 729 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 RMND1Q9NWS8 449 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 DDX25Q9UHL0 483 aaKnown RBP8.87□□□□□ -0.99
CSDE1-214ENST00000530886 BZW2Q9Y6E2 419 aaKnown RBP8.87□□□□□ -0.99
CSDE1-214ENST00000530886 XDHP47989 1333 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 SPATA31A3Q5VYP0 1347 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 MAGEA13PA6NCF6 341 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 DCDC2CA8MYV0 355 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 BACH1O14867 736 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 MMP1P03956 469 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 FAM200BP0CF97 657 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 FOXO4P98177 505 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 USH1GQ495M9 461 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 TNFAIP8L3Q5GJ75 292 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 DAB2IPQ5VWQ8 1189 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 ZBTB8BQ8NAP8 495 aaPredicted RBP8.87□□□□□ -0.99
CSDE1-214ENST00000530886 USP38Q8NB14 1042 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 PIGOQ8TEQ8 1089 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 NELFBQ8WX92 580 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 WASF1Q92558 559 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 CSRNP2Q9H175 543 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 SMARCAL1Q9NZC9 954 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 EHD2Q9NZN4 543 aa8.87□□□□□ -0.99
CSDE1-214ENST00000530886 WNT7AO00755 349 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 VIL1P09327 827 aaKnown RBP8.86□□□□□ -0.99
CSDE1-214ENST00000530886 GJA8P48165 433 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 ACVR2BQ13705 512 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 SGMS1Q86VZ5 419 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 RNF168Q8IYW5 571 aaPredicted RBP8.86□□□□□ -0.99
CSDE1-214ENST00000530886 AGGF1Q8N302 714 aaeCLIP8.86□□□□□ -0.99
CSDE1-214ENST00000530886 OR2W6PQ8NHA6 318 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 NCOA7Q8NI08 942 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 CCDC42Q96M95 316 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 NOX5Q96PH1 765 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 ERGIC2Q96RQ1 377 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 KRT12Q99456 494 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 TMEM109Q9BVC6 243 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 PHACTR1Q9C0D0 580 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 MIS12Q9H081 205 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 TMEM165Q9HC07 324 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 DDX21Q9NR30 783 aaKnown RBP eCLIP8.86□□□□□ -0.99
CSDE1-214ENST00000530886 TUBGCP4Q9UGJ1 667 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 FBXL5Q9UKA1 691 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 RNF113AO15541 343 aaKnown RBP8.86□□□□□ -0.99
CSDE1-214ENST00000530886 SUN1O94901 812 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 UPP2O95045 317 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 UNC5CO95185 931 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 GUCY1A2P33402 732 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 SPDYAQ5MJ70 313 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 RNF43Q68DV7 783 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 ARHGAP27Q6ZUM4 889 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 ZSCAN29Q8IWY8 852 aaPredicted RBP8.86□□□□□ -0.99
CSDE1-214ENST00000530886 SCFD2Q8WU76 684 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 INPP5DQ92835 1189 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 UTP4Q969X6 686 aaKnown RBP8.86□□□□□ -0.99
CSDE1-214ENST00000530886 SMC6Q96SB8 1091 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 ELAC2Q9BQ52 826 aaKnown RBP8.86□□□□□ -0.99
CSDE1-214ENST00000530886 AGPAT5Q9NUQ2 364 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 EXOC1Q9NV70 894 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 PCDHB6Q9Y5E3 794 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.86□□□□□ -0.99
CSDE1-214ENST00000530886 BTBD19C9JJ37 291 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 CASP1P29466 404 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 RAD23BP54727 409 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 CYP27A1Q02318 531 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 ASTE1Q2TB18 679 aaPredicted RBP8.86□□□□□ -0.99
CSDE1-214ENST00000530886 CHADLQ6NUI6 762 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 APOA5Q6Q788 366 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 RSPH1Q8WYR4 309 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 FERMT2Q96AC1 680 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 RMDN2Q96LZ7 410 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 NR1H4Q96RI1 486 aaPredicted RBP8.86□□□□□ -0.99
CSDE1-214ENST00000530886 SPATA16Q9BXB7 569 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 UBA5Q9GZZ9 404 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 ZMYND8Q9ULU4 1186 aaPredicted RBP8.86□□□□□ -0.99
CSDE1-214ENST00000530886 ARL2BPQ9Y2Y0 163 aa8.86□□□□□ -0.99
CSDE1-214ENST00000530886 LRP5O75197 1615 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms