RNA–Protein interactions for RNA: ENST00000530120.5

CSRP1-213, Transcript of cysteine and glycine rich protein 1, human

TSL 4

Gene CSRP1, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSRP1-213	ENST00000530120	PHOX2B	Q99453	314 aa		13.82	□□□□□ -0.2
CSRP1-213	ENST00000530120	SEC63	Q9UGP8	760 aa	Known RBP	13.82	□□□□□ -0.2
CSRP1-213	ENST00000530120	PIK3CD	O00329	1044 aa		13.81	□□□□□ -0.2
CSRP1-213	ENST00000530120	FIBP	O43427	364 aa		13.81	□□□□□ -0.2
CSRP1-213	ENST00000530120	CYTH3	O43739	400 aa		13.81	□□□□□ -0.2
CSRP1-213	ENST00000530120	UPP2	O95045	317 aa		13.81	□□□□□ -0.2
CSRP1-213	ENST00000530120	HOXC8	P31273	242 aa		13.81	□□□□□ -0.2
CSRP1-213	ENST00000530120	ICAM3	P32942	547 aa		13.81	□□□□□ -0.2
CSRP1-213	ENST00000530120	THPO	P40225	353 aa		13.81	□□□□□ -0.2
CSRP1-213	ENST00000530120	PKN1	Q16512	942 aa		13.81	□□□□□ -0.2
CSRP1-213	ENST00000530120	HSDL1	Q3SXM5	330 aa		13.81	□□□□□ -0.2
CSRP1-213	ENST00000530120	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.81	□□□□□ -0.2
CSRP1-213	ENST00000530120	RNF135	Q8IUD6	432 aa		13.81	□□□□□ -0.2
CSRP1-213	ENST00000530120	TEX2	Q8IWB9	1127 aa		13.81	□□□□□ -0.2
CSRP1-213	ENST00000530120	DBF4B	Q8NFT6	615 aa		13.81	□□□□□ -0.2
CSRP1-213	ENST00000530120	IGDCC4	Q8TDY8	1250 aa		13.81	□□□□□ -0.2
CSRP1-213	ENST00000530120	CUL5	Q93034	780 aa		13.81	□□□□□ -0.2
CSRP1-213	ENST00000530120	RRP36	Q96EU6	259 aa	Known RBP	13.81	□□□□□ -0.2
CSRP1-213	ENST00000530120	TMEM87B	Q96K49	555 aa		13.81	□□□□□ -0.2
CSRP1-213	ENST00000530120	USP26	Q9BXU7	913 aa		13.81	□□□□□ -0.2
CSRP1-213	ENST00000530120	MLXIP	Q9HAP2	919 aa		13.81	□□□□□ -0.2
CSRP1-213	ENST00000530120	ATG2A	Q2TAZ0	1938 aa		13.81	□□□□□ -0.2
CSRP1-213	ENST00000530120	USP34	Q70CQ2	3546 aa		13.81	□□□□□ -0.2
CSRP1-213	ENST00000530120	RSPH10B2	B2RC85	870 aa		13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	NOP56	O00567	594 aa	Known RBP	13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	RSPH10B	P0C881	870 aa		13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	CALM1	P0DP23	149 aa		13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	CALM2	P0DP24	149 aa		13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	CALM3	P0DP25	149 aa		13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	GNAT1	P11488	350 aa		13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	MCM5	P33992	734 aa		13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	MBTPS1	Q14703	1052 aa		13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	SMAD2	Q15796	467 aa	Known RBP	13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	SLC35G1	Q2M3R5	365 aa		13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	TRIM71	Q2Q1W2	868 aa	Known RBP	13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	METTL7B	Q6UX53	244 aa		13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	SERINC5	Q86VE9	423 aa		13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	FCHSD1	Q86WN1	690 aa		13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	ZNF654	Q8IZM8	581 aa		13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	PRSS33	Q8NF86	280 aa		13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	IL31RA	Q8NI17	732 aa		13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	SEPT8	Q92599	483 aa		13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	PBXIP1	Q96AQ6	731 aa		13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	SENP7	Q9BQF6	1050 aa		13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	LY9	Q9HBG7	655 aa		13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	ZNF215	Q9UL58	517 aa	Predicted RBP	13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	RBM8A	Q9Y5S9	174 aa	Known RBP	13.8	□□□□□ -0.2
CSRP1-213	ENST00000530120	CFAP54	Q96N23	3096 aa		13.79	□□□□□ -0.2
CSRP1-213	ENST00000530120	C17orf102	A2RUQ5	167 aa		13.79	□□□□□ -0.2
CSRP1-213	ENST00000530120		H3BRB1	525 aa		13.79	□□□□□ -0.2
CSRP1-213	ENST00000530120	STXBP3	O00186	592 aa		13.79	□□□□□ -0.2
CSRP1-213	ENST00000530120	MBTPS2	O43462	519 aa		13.79	□□□□□ -0.2
CSRP1-213	ENST00000530120	CTNNB1	P35222	781 aa		13.79	□□□□□ -0.2
CSRP1-213	ENST00000530120	LIFR	P42702	1097 aa		13.79	□□□□□ -0.2
CSRP1-213	ENST00000530120	ANTXR2	P58335	489 aa		13.79	□□□□□ -0.2
CSRP1-213	ENST00000530120	SMAD4	Q13485	552 aa	Known RBP	13.79	□□□□□ -0.2
CSRP1-213	ENST00000530120	COL19A1	Q14993	1142 aa		13.79	□□□□□ -0.2
CSRP1-213	ENST00000530120	PCNX4	Q63HM2	1172 aa		13.79	□□□□□ -0.2
CSRP1-213	ENST00000530120	TRAF7	Q6Q0C0	670 aa		13.79	□□□□□ -0.2
CSRP1-213	ENST00000530120	EDA	Q92838	391 aa		13.79	□□□□□ -0.2
CSRP1-213	ENST00000530120	WNT8B	Q93098	351 aa		13.79	□□□□□ -0.2
CSRP1-213	ENST00000530120	CDHR1	Q96JP9	859 aa		13.79	□□□□□ -0.2
CSRP1-213	ENST00000530120	C16orf70	Q9BSU1	422 aa		13.79	□□□□□ -0.2
CSRP1-213	ENST00000530120	TUT1	Q9H6E5	874 aa	Known RBP	13.79	□□□□□ -0.2
CSRP1-213	ENST00000530120	COL4A6	Q14031	1691 aa		13.79	□□□□□ -0.2
CSRP1-213	ENST00000530120	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.78	□□□□□ -0.2
CSRP1-213	ENST00000530120	SPTBN4	Q9H254	2564 aa		13.78	□□□□□ -0.2
CSRP1-213	ENST00000530120	TMEM221	A6NGB7	291 aa		13.78	□□□□□ -0.2
CSRP1-213	ENST00000530120	CCDC69	A6NI79	296 aa		13.78	□□□□□ -0.2
CSRP1-213	ENST00000530120	SPATA31C2	B4DYI2	1134 aa		13.78	□□□□□ -0.2
CSRP1-213	ENST00000530120		M0R296	226 aa		13.78	□□□□□ -0.2
CSRP1-213	ENST00000530120	GFRA3	O60609	400 aa		13.78	□□□□□ -0.2
CSRP1-213	ENST00000530120	LGALS2	P05162	132 aa		13.78	□□□□□ -0.2
CSRP1-213	ENST00000530120	ANP32A	P39687	249 aa	Known RBP	13.78	□□□□□ -0.2
CSRP1-213	ENST00000530120	ZNF200	P98182	395 aa	Predicted RBP	13.78	□□□□□ -0.2
CSRP1-213	ENST00000530120	SP2	Q02086	613 aa		13.78	□□□□□ -0.2
CSRP1-213	ENST00000530120	PLEKHG4	Q58EX7	1191 aa		13.78	□□□□□ -0.2
CSRP1-213	ENST00000530120	BMP8A	Q7Z5Y6	402 aa		13.78	□□□□□ -0.2
CSRP1-213	ENST00000530120	NLRX1	Q86UT6	975 aa		13.78	□□□□□ -0.2
CSRP1-213	ENST00000530120	SMARCC2	Q8TAQ2	1214 aa		13.78	□□□□□ -0.2
CSRP1-213	ENST00000530120	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.78	□□□□□ -0.2
CSRP1-213	ENST00000530120	IFIH1	Q9BYX4	1025 aa	Known RBP	13.78	□□□□□ -0.2
CSRP1-213	ENST00000530120	LMAN2L	Q9H0V9	348 aa		13.78	□□□□□ -0.2
CSRP1-213	ENST00000530120	SENP2	Q9HC62	589 aa		13.78	□□□□□ -0.2
CSRP1-213	ENST00000530120	CACNA1H	O95180	2353 aa		13.78	□□□□□ -0.2
CSRP1-213	ENST00000530120	SH2B2	O14492	632 aa	Predicted RBP	13.77	□□□□□ -0.21
CSRP1-213	ENST00000530120	PRC1	O43663	620 aa		13.77	□□□□□ -0.21
CSRP1-213	ENST00000530120	LTBR	P36941	435 aa		13.77	□□□□□ -0.21
CSRP1-213	ENST00000530120	MRPS9	P82933	396 aa	Known RBP	13.77	□□□□□ -0.21
CSRP1-213	ENST00000530120	FOXK2	Q01167	660 aa		13.77	□□□□□ -0.21
CSRP1-213	ENST00000530120	IER5L	Q5T953	404 aa		13.77	□□□□□ -0.21
CSRP1-213	ENST00000530120	NFXL1	Q6ZNB6	911 aa		13.77	□□□□□ -0.21
CSRP1-213	ENST00000530120	TRIM67	Q6ZTA4	783 aa		13.77	□□□□□ -0.21
CSRP1-213	ENST00000530120	KMT2E	Q8IZD2	1858 aa		13.77	□□□□□ -0.21
CSRP1-213	ENST00000530120	FIBCD1	Q8N539	461 aa		13.77	□□□□□ -0.21
CSRP1-213	ENST00000530120	ATP6V0A1	Q93050	837 aa		13.77	□□□□□ -0.21
CSRP1-213	ENST00000530120	TOP1MT	Q969P6	601 aa		13.77	□□□□□ -0.21
CSRP1-213	ENST00000530120	GPRASP2	Q96D09	838 aa		13.77	□□□□□ -0.21
CSRP1-213	ENST00000530120	IGFLR1	Q9H665	355 aa		13.77	□□□□□ -0.21

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