RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 EP400NLQ6ZTU2 488 aa8.25□□□□□ -1.09
CAPRIN1-208ENST00000530008 FRMD7Q6ZUT3 714 aa8.25□□□□□ -1.09
CAPRIN1-208ENST00000530008 PIP4K2CQ8TBX8 421 aa8.25□□□□□ -1.09
CAPRIN1-208ENST00000530008 SH3RF2Q8TEC5 729 aa8.25□□□□□ -1.09
CAPRIN1-208ENST00000530008 ZNF526Q8TF50 670 aaPredicted RBP8.25□□□□□ -1.09
CAPRIN1-208ENST00000530008 LRGUKQ96M69 825 aa8.25□□□□□ -1.09
CAPRIN1-208ENST00000530008 OSBPL1AQ9BXW6 950 aa8.25□□□□□ -1.09
CAPRIN1-208ENST00000530008 SP110Q9HB58 689 aa8.25□□□□□ -1.09
CAPRIN1-208ENST00000530008 ACSS2Q9NR19 701 aa8.25□□□□□ -1.09
CAPRIN1-208ENST00000530008 ATG3Q9NT62 314 aa8.25□□□□□ -1.09
CAPRIN1-208ENST00000530008 SRPK3Q9UPE1 567 aa8.25□□□□□ -1.09
CAPRIN1-208ENST00000530008 INVSQ9Y283 1065 aa8.25□□□□□ -1.09
CAPRIN1-208ENST00000530008 COA3Q9Y2R0 106 aaPredicted RBP8.25□□□□□ -1.09
CAPRIN1-208ENST00000530008 SNX11Q9Y5W9 270 aa8.25□□□□□ -1.09
CAPRIN1-208ENST00000530008 SCDO00767 359 aa8.24□□□□□ -1.09
CAPRIN1-208ENST00000530008 ERC2O15083 957 aa8.24□□□□□ -1.09
CAPRIN1-208ENST00000530008 FUCA1P04066 466 aa8.24□□□□□ -1.09
CAPRIN1-208ENST00000530008 PTX3P26022 381 aaPredicted RBP8.24□□□□□ -1.09
CAPRIN1-208ENST00000530008 NFIAQ12857 509 aa8.24□□□□□ -1.09
CAPRIN1-208ENST00000530008 GRM3Q14832 879 aa8.24□□□□□ -1.09
CAPRIN1-208ENST00000530008 ACAP2Q15057 778 aa8.24□□□□□ -1.09
CAPRIN1-208ENST00000530008 VPS72Q15906 364 aa8.24□□□□□ -1.09
CAPRIN1-208ENST00000530008 IFI16Q16666 785 aaKnown RBP8.24□□□□□ -1.09
CAPRIN1-208ENST00000530008 CPZQ66K79 652 aa8.24□□□□□ -1.09
CAPRIN1-208ENST00000530008 PLD6Q8N2A8 252 aaKnown RBP8.24□□□□□ -1.09
CAPRIN1-208ENST00000530008 PLEKHO2Q8TD55 490 aa8.24□□□□□ -1.09
CAPRIN1-208ENST00000530008 DLG3Q92796 817 aa8.24□□□□□ -1.09
CAPRIN1-208ENST00000530008 TEKT5Q96M29 485 aa8.24□□□□□ -1.09
CAPRIN1-208ENST00000530008 DBNDD2Q9BQY9 259 aa8.24□□□□□ -1.09
CAPRIN1-208ENST00000530008 SARGQ9BW04 601 aa8.24□□□□□ -1.09
CAPRIN1-208ENST00000530008 CCM2LQ9NUG4 571 aaPredicted RBP8.24□□□□□ -1.09
CAPRIN1-208ENST00000530008 B3GALT1Q9Y5Z6 326 aa8.24□□□□□ -1.09
CAPRIN1-208ENST00000530008 TMEM265A0A087WTH1 108 aa8.23□□□□□ -1.09
CAPRIN1-208ENST00000530008 LCHNA4D1U4 455 aa8.23□□□□□ -1.09
CAPRIN1-208ENST00000530008 CLASP2O75122 1294 aaKnown RBP8.23□□□□□ -1.09
CAPRIN1-208ENST00000530008 ZRANB2O95218 330 aaKnown RBP eCLIP8.23□□□□□ -1.093e-12■■■□□ 16.4
CAPRIN1-208ENST00000530008 CYP17A1P05093 508 aa8.23□□□□□ -1.09
CAPRIN1-208ENST00000530008 ASGR2P07307 311 aa8.23□□□□□ -1.09
CAPRIN1-208ENST00000530008 CD40P25942 277 aa8.23□□□□□ -1.09
CAPRIN1-208ENST00000530008 ARHGAP29Q52LW3 1261 aa8.23□□□□□ -1.09
CAPRIN1-208ENST00000530008 ESRP1Q6NXG1 681 aaKnown RBP8.23□□□□□ -1.09
CAPRIN1-208ENST00000530008 CC2D1AQ6P1N0 951 aaPredicted RBP8.23□□□□□ -1.09
CAPRIN1-208ENST00000530008 TSHZ1Q6ZSZ6 1077 aa8.23□□□□□ -1.09
CAPRIN1-208ENST00000530008 CD163Q86VB7 1156 aa8.23□□□□□ -1.09
CAPRIN1-208ENST00000530008 NETO1Q8TDF5 533 aa8.23□□□□□ -1.09
CAPRIN1-208ENST00000530008 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.23□□□□□ -1.092e-7■□□□□ 9.7
CAPRIN1-208ENST00000530008 TNFRSF10DQ9UBN6 386 aa8.23□□□□□ -1.09
CAPRIN1-208ENST00000530008 DSEQ9UL01 958 aa8.23□□□□□ -1.09
CAPRIN1-208ENST00000530008 FADS2P1A8MWK0 482 aa8.22□□□□□ -1.09
CAPRIN1-208ENST00000530008 HSPA6P17066 643 aa8.22□□□□□ -1.09
CAPRIN1-208ENST00000530008 SAFB2Q14151 953 aaKnown RBP eCLIP8.22□□□□□ -1.09
CAPRIN1-208ENST00000530008 RRP12Q5JTH9 1297 aaKnown RBP8.22□□□□□ -1.09
CAPRIN1-208ENST00000530008 TTLL7Q6ZT98 887 aa8.22□□□□□ -1.09
CAPRIN1-208ENST00000530008 RIOX2Q8IUF8 465 aa8.22□□□□□ -1.09
CAPRIN1-208ENST00000530008 ZZZ3Q8IYH5 903 aa8.22□□□□□ -1.09
CAPRIN1-208ENST00000530008 NLGN4XQ8N0W4 816 aa8.22□□□□□ -1.09
CAPRIN1-208ENST00000530008 PJA1Q8NG27 643 aa8.22□□□□□ -1.09
CAPRIN1-208ENST00000530008 UHMK1Q8TAS1 419 aaKnown RBP8.22□□□□□ -1.09
CAPRIN1-208ENST00000530008 SHKBP1Q8TBC3 707 aa8.22□□□□□ -1.09
CAPRIN1-208ENST00000530008 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.22□□□□□ -1.09
CAPRIN1-208ENST00000530008 MAP6Q96JE9 813 aa8.22□□□□□ -1.09
CAPRIN1-208ENST00000530008 ACAP3Q96P50 834 aa8.22□□□□□ -1.09
CAPRIN1-208ENST00000530008 JMJD8Q96S16 334 aa8.22□□□□□ -1.09
CAPRIN1-208ENST00000530008 ORAI2Q96SN7 254 aa8.22□□□□□ -1.09
CAPRIN1-208ENST00000530008 MTA3Q9BTC8 594 aa8.22□□□□□ -1.09
CAPRIN1-208ENST00000530008 CD244Q9BZW8 370 aa8.22□□□□□ -1.09
CAPRIN1-208ENST00000530008 SLC6A20Q9NP91 592 aa8.22□□□□□ -1.09
CAPRIN1-208ENST00000530008 USP25Q9UHP3 1055 aa8.22□□□□□ -1.09
CAPRIN1-208ENST00000530008 RWDD3Q9Y3V2 267 aa8.22□□□□□ -1.09
CAPRIN1-208ENST00000530008 ATP23Q9Y6H3 246 aa8.22□□□□□ -1.09
CAPRIN1-208ENST00000530008 FRMPD2Q68DX3 1309 aaPredicted RBP8.22□□□□□ -1.09
CAPRIN1-208ENST00000530008 C1QTNF9BB2RNN3 333 aa8.21□□□□□ -1.1
CAPRIN1-208ENST00000530008 CREB3O43889 395 aa8.21□□□□□ -1.1
CAPRIN1-208ENST00000530008 NBPF7P0C2Y1 421 aaPredicted RBP8.21□□□□□ -1.1
CAPRIN1-208ENST00000530008 SEC23AQ15436 765 aa8.21□□□□□ -1.1
CAPRIN1-208ENST00000530008 CPSF6Q16630 551 aaKnown RBP eCLIP8.21□□□□□ -1.1
CAPRIN1-208ENST00000530008 MROH9Q5TGP6 573 aa8.21□□□□□ -1.1
CAPRIN1-208ENST00000530008 SLCO6A1Q86UG4 719 aa8.21□□□□□ -1.1
CAPRIN1-208ENST00000530008 NLGN2Q8NFZ4 835 aa8.21□□□□□ -1.1
CAPRIN1-208ENST00000530008 TGFBRAP1Q8WUH2 860 aa8.21□□□□□ -1.1
CAPRIN1-208ENST00000530008 JADE3Q92613 823 aa8.21□□□□□ -1.1
CAPRIN1-208ENST00000530008 RUNDC1Q96C34 613 aa8.21□□□□□ -1.1
CAPRIN1-208ENST00000530008 HHIPL1Q96JK4 782 aa8.21□□□□□ -1.1
CAPRIN1-208ENST00000530008 G6PC3Q9BUM1 346 aa8.21□□□□□ -1.1
CAPRIN1-208ENST00000530008 NMRK2Q9NPI5 230 aa8.21□□□□□ -1.1
CAPRIN1-208ENST00000530008 KCNH7Q9NS40 1196 aa8.21□□□□□ -1.1
CAPRIN1-208ENST00000530008 DDX20Q9UHI6 824 aaKnown RBP8.21□□□□□ -1.1
CAPRIN1-208ENST00000530008 A0A1W2PQ45 241 aaPredicted RBP8.2□□□□□ -1.1
CAPRIN1-208ENST00000530008 A0A1W2PQY0 241 aa8.2□□□□□ -1.1
CAPRIN1-208ENST00000530008 KRIT1O00522 736 aa8.2□□□□□ -1.1
CAPRIN1-208ENST00000530008 TMEM132BQ14DG7 1078 aa8.2□□□□□ -1.1
CAPRIN1-208ENST00000530008 LONRF3Q496Y0 759 aa8.2□□□□□ -1.1
CAPRIN1-208ENST00000530008 IFIT1BQ5T764 474 aaKnown RBP8.2□□□□□ -1.1
CAPRIN1-208ENST00000530008 IL31Q6EBC2 164 aa8.2□□□□□ -1.1
CAPRIN1-208ENST00000530008 DNAJC28Q9NX36 388 aa8.2□□□□□ -1.1
CAPRIN1-208ENST00000530008 SAP30BPQ9UHR5 308 aaKnown RBP8.2□□□□□ -1.1
CAPRIN1-208ENST00000530008 IFIT2P09913 472 aaKnown RBP8.19□□□□□ -1.1
CAPRIN1-208ENST00000530008 AKAP5P24588 427 aa8.19□□□□□ -1.1
CAPRIN1-208ENST00000530008 NEK3P51956 506 aa8.19□□□□□ -1.1
CAPRIN1-208ENST00000530008 CORO7P57737 925 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms