RNA–Protein interactions for RNA: ENST00000529073.5

CCDC90B-211, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5 BASIC

Gene CCDC90B, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-211ENST00000529073 TSPYL2Q9H2G4 693 aaPredicted RBP13□□□□□ -0.33
CCDC90B-211ENST00000529073 SH3GLB2Q9NR46 395 aa13□□□□□ -0.33
CCDC90B-211ENST00000529073 BTBD18B2RXH4 712 aa12.99□□□□□ -0.33
CCDC90B-211ENST00000529073 MSH4O15457 936 aa12.99□□□□□ -0.33
CCDC90B-211ENST00000529073 ZEB2O60315 1214 aa12.99□□□□□ -0.33
CCDC90B-211ENST00000529073 CSF2RAP15509 400 aa12.99□□□□□ -0.33
CCDC90B-211ENST00000529073 ZNF76P36508 570 aa12.99□□□□□ -0.33
CCDC90B-211ENST00000529073 ACTR2P61160 394 aa12.99□□□□□ -0.33
CCDC90B-211ENST00000529073 NBR1Q14596 966 aa12.99□□□□□ -0.33
CCDC90B-211ENST00000529073 SHHQ15465 462 aa12.99□□□□□ -0.33
CCDC90B-211ENST00000529073 FAM109BQ6ICB4 259 aaPredicted RBP12.99□□□□□ -0.33
CCDC90B-211ENST00000529073 CPLX2Q6PUV4 134 aaKnown RBP12.99□□□□□ -0.33
CCDC90B-211ENST00000529073 PIK3AP1Q6ZUJ8 805 aa12.99□□□□□ -0.33
CCDC90B-211ENST00000529073 LRCH3Q96II8 777 aa12.99□□□□□ -0.33
CCDC90B-211ENST00000529073 RNPEPQ9H4A4 650 aa12.99□□□□□ -0.33
CCDC90B-211ENST00000529073 LAMA2P24043 3122 aaKnown RBP12.99□□□□□ -0.33
CCDC90B-211ENST00000529073 SZT2Q5T011 3432 aa12.98□□□□□ -0.33
CCDC90B-211ENST00000529073 DCDC2CA8MYV0 355 aa12.98□□□□□ -0.33
CCDC90B-211ENST00000529073 NOP56O00567 594 aaKnown RBP12.98□□□□□ -0.33
CCDC90B-211ENST00000529073 STAM2O75886 525 aa12.98□□□□□ -0.33
CCDC90B-211ENST00000529073 CABYRO75952 493 aa12.98□□□□□ -0.33
CCDC90B-211ENST00000529073 CDKL5O76039 1030 aa12.98□□□□□ -0.33
CCDC90B-211ENST00000529073 FOSP01100 380 aaPredicted RBP12.98□□□□□ -0.33
CCDC90B-211ENST00000529073 CYP3A4P08684 503 aa12.98□□□□□ -0.33
CCDC90B-211ENST00000529073 SMIM10L2AP0DMW4 78 aa12.98□□□□□ -0.33
CCDC90B-211ENST00000529073 SMIM10L2BP0DMW5 78 aa12.98□□□□□ -0.33
CCDC90B-211ENST00000529073 RAG1P15918 1043 aa12.98□□□□□ -0.33
CCDC90B-211ENST00000529073 GNA11P29992 359 aa12.98□□□□□ -0.33
CCDC90B-211ENST00000529073 GPNMBQ14956 572 aa12.98□□□□□ -0.33
CCDC90B-211ENST00000529073 UGCGQ16739 394 aa12.98□□□□□ -0.33
CCDC90B-211ENST00000529073 XRRA1Q6P2D8 792 aa12.98□□□□□ -0.33
CCDC90B-211ENST00000529073 RUFY4Q6ZNE9 571 aa12.98□□□□□ -0.33
CCDC90B-211ENST00000529073 CCDC60Q8IWA6 550 aaPredicted RBP12.98□□□□□ -0.33
CCDC90B-211ENST00000529073 CCDC12Q8WUD4 166 aaPredicted RBP12.98□□□□□ -0.33
CCDC90B-211ENST00000529073 UBE2OQ9C0C9 1292 aaKnown RBP12.98□□□□□ -0.33
CCDC90B-211ENST00000529073 SETD4Q9NVD3 440 aa12.98□□□□□ -0.33
CCDC90B-211ENST00000529073 TRIOBPQ9H2D6 2365 aa12.98□□□□□ -0.33
CCDC90B-211ENST00000529073 TMEM150BA6NC51 233 aa12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 TREHO43280 583 aa12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 CHMP2AO43633 222 aa12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 MMP1P03956 469 aa12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 TGFB3P10600 412 aa12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 ATP4AP20648 1035 aa12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 CIITAP33076 1130 aa12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 NEDD9Q14511 834 aa12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 MBTPS1Q14703 1052 aa12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 TRIM71Q2Q1W2 868 aaKnown RBP12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 LETM2Q2VYF4 491 aa12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 KCNV1Q6PIU1 500 aa12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 TRAF7Q6Q0C0 670 aa12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 TRMT1LQ7Z2T5 733 aaKnown RBP12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 DIS3L2Q8IYB7 885 aaKnown RBP12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 SENP7Q9BQF6 1050 aa12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 ZNF577Q9BSK1 485 aa12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 UNC45AQ9H3U1 944 aa12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 HIPK3Q9H422 1215 aa12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 EHMT1Q9H9B1 1298 aa12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 JPH1Q9HDC5 661 aaPredicted RBP12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 SLC9A2Q9UBY0 812 aa12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 GTF2IRD1Q9UHL9 959 aa12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 PTPRSQ13332 1948 aa12.97□□□□□ -0.33
CCDC90B-211ENST00000529073 H3BRB1 525 aa12.96□□□□□ -0.33
CCDC90B-211ENST00000529073 IPO5O00410 1097 aaKnown RBP12.96□□□□□ -0.33
CCDC90B-211ENST00000529073 TIMP1P01033 207 aa12.96□□□□□ -0.33
CCDC90B-211ENST00000529073 KRT2P35908 639 aa12.96□□□□□ -0.33
CCDC90B-211ENST00000529073 FXR1P51114 621 aaKnown RBP eCLIP12.96□□□□□ -0.33
CCDC90B-211ENST00000529073 IGBP1P78318 339 aa12.96□□□□□ -0.33
CCDC90B-211ENST00000529073 NONOQ15233 471 aaKnown RBP eCLIP12.96□□□□□ -0.33
CCDC90B-211ENST00000529073 PTGISQ16647 500 aa12.96□□□□□ -0.33
CCDC90B-211ENST00000529073 NFRKBQ6P4R8 1299 aa12.96□□□□□ -0.33
CCDC90B-211ENST00000529073 LMBR1Q8WVP7 490 aa12.96□□□□□ -0.33
CCDC90B-211ENST00000529073 TOX2Q96NM4 488 aa12.96□□□□□ -0.33
CCDC90B-211ENST00000529073 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.96□□□□□ -0.33
CCDC90B-211ENST00000529073 TUT1Q9H6E5 874 aaKnown RBP12.96□□□□□ -0.33
CCDC90B-211ENST00000529073 WDR81Q562E7 1941 aa12.96□□□□□ -0.34
CCDC90B-211ENST00000529073 NFASCO94856 1347 aa12.95□□□□□ -0.34
CCDC90B-211ENST00000529073 GRXCR1A8MXD5 290 aa12.95□□□□□ -0.34
CCDC90B-211ENST00000529073 TLR3O15455 904 aaKnown RBP12.95□□□□□ -0.34
CCDC90B-211ENST00000529073 PPFIA4O75335 1185 aa12.95□□□□□ -0.34
CCDC90B-211ENST00000529073 LGR5O75473 907 aa12.95□□□□□ -0.34
CCDC90B-211ENST00000529073 ATP2B1P20020 1258 aa12.95□□□□□ -0.34
CCDC90B-211ENST00000529073 HOXC8P31273 242 aa12.95□□□□□ -0.34
CCDC90B-211ENST00000529073 BRDTQ58F21 947 aaPredicted RBP12.95□□□□□ -0.34
CCDC90B-211ENST00000529073 MARCH8Q5T0T0 291 aa12.95□□□□□ -0.34
CCDC90B-211ENST00000529073 NIPA1Q7RTP0 329 aa12.95□□□□□ -0.34
CCDC90B-211ENST00000529073 KRT25Q7Z3Z0 450 aa12.95□□□□□ -0.34
CCDC90B-211ENST00000529073 TMCO2Q7Z6W1 182 aaPredicted RBP12.95□□□□□ -0.34
CCDC90B-211ENST00000529073 DEFB128Q7Z7B8 93 aa12.95□□□□□ -0.34
CCDC90B-211ENST00000529073 C7orf31Q8N865 590 aa12.95□□□□□ -0.34
CCDC90B-211ENST00000529073 ETNPPLQ8TBG4 499 aa12.95□□□□□ -0.34
CCDC90B-211ENST00000529073 BICD2Q8TD16 824 aa12.95□□□□□ -0.34
CCDC90B-211ENST00000529073 SLC5A5Q92911 643 aa12.95□□□□□ -0.34
CCDC90B-211ENST00000529073 MBOAT7Q96N66 472 aa12.95□□□□□ -0.34
CCDC90B-211ENST00000529073 UPF2Q9HAU5 1272 aaKnown RBP12.95□□□□□ -0.34
CCDC90B-211ENST00000529073 CXXC1Q9P0U4 656 aaPredicted RBP12.95□□□□□ -0.34
CCDC90B-211ENST00000529073 PRKAG2Q9UGJ0 569 aa12.95□□□□□ -0.34
CCDC90B-211ENST00000529073 MROH7Q68CQ1 1323 aa12.94□□□□□ -0.34
CCDC90B-211ENST00000529073 TET1Q8NFU7 2136 aa12.94□□□□□ -0.34
CCDC90B-211ENST00000529073 GBF1Q92538 1859 aa12.94□□□□□ -0.34
CCDC90B-211ENST00000529073 EML1O00423 815 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms