RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 JAG2Q9Y219 1238 aa4.38□□□□□ -1.71
BRCA2-203ENST00000528762 TRBV23OR9-2A0A075B6M9 112 aa4.37□□□□□ -1.71
BRCA2-203ENST00000528762 F8W031 263 aaPredicted RBP4.37□□□□□ -1.71
BRCA2-203ENST00000528762 FGF10O15520 208 aaPredicted RBP4.37□□□□□ -1.71
BRCA2-203ENST00000528762 GPR39O43194 453 aa4.37□□□□□ -1.71
BRCA2-203ENST00000528762 PRICKLE3O43900 615 aaPredicted RBP4.37□□□□□ -1.71
BRCA2-203ENST00000528762 KATNA1O75449 491 aa4.37□□□□□ -1.71
BRCA2-203ENST00000528762 MAP4K4O95819 1239 aaPredicted RBP4.37□□□□□ -1.71
BRCA2-203ENST00000528762 SRGAP2CP0DJJ0 459 aa4.37□□□□□ -1.71
BRCA2-203ENST00000528762 PYGMP11217 842 aa4.37□□□□□ -1.71
BRCA2-203ENST00000528762 ATF2P15336 505 aa4.37□□□□□ -1.71
BRCA2-203ENST00000528762 PAMP19021 973 aa4.37□□□□□ -1.71
BRCA2-203ENST00000528762 LTBRP36941 435 aa4.37□□□□□ -1.71
BRCA2-203ENST00000528762 EPHB1P54762 984 aa4.37□□□□□ -1.71
BRCA2-203ENST00000528762 PRR5P85299 388 aa4.37□□□□□ -1.71
BRCA2-203ENST00000528762 STAT4Q14765 748 aa4.37□□□□□ -1.71
BRCA2-203ENST00000528762 TESK1Q15569 626 aa4.37□□□□□ -1.71
BRCA2-203ENST00000528762 EEF1DP3Q658K8 133 aa4.37□□□□□ -1.71
BRCA2-203ENST00000528762 RCSD1Q6JBY9 416 aa4.37□□□□□ -1.71
BRCA2-203ENST00000528762 LBX2Q6XYB7 198 aa4.37□□□□□ -1.71
BRCA2-203ENST00000528762 NECAB2Q7Z6G3 386 aa4.37□□□□□ -1.71
BRCA2-203ENST00000528762 SP8Q8IXZ3 490 aa4.37□□□□□ -1.71
BRCA2-203ENST00000528762 NXPE1Q8N323 547 aa4.37□□□□□ -1.71
BRCA2-203ENST00000528762 LINC01356Q8N9X3 169 aa4.37□□□□□ -1.71
BRCA2-203ENST00000528762 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.37□□□□□ -1.71
BRCA2-203ENST00000528762 MMP19Q99542 508 aa4.37□□□□□ -1.71
BRCA2-203ENST00000528762 ALG1Q9BT22 464 aa4.37□□□□□ -1.71
BRCA2-203ENST00000528762 BDH2Q9BUT1 245 aa4.37□□□□□ -1.71
BRCA2-203ENST00000528762 PUS7LQ9H0K6 701 aaKnown RBP4.37□□□□□ -1.71
BRCA2-203ENST00000528762 GEMIN8Q9NWZ8 242 aaKnown RBP4.37□□□□□ -1.71
BRCA2-203ENST00000528762 FBLN5Q9UBX5 448 aa4.37□□□□□ -1.71
BRCA2-203ENST00000528762 DBR1Q9UK59 544 aaKnown RBP4.37□□□□□ -1.71
BRCA2-203ENST00000528762 NPHP3-ACAD11A0A0J9YXS1 232 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 ARVCFO00192 962 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 GSTA4O15217 222 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 TSPAN6O43657 245 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 MSCO60682 206 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 TBC1D8O95759 1140 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 F2P00734 622 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 CELA3BP08861 270 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 LCP1P13796 627 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 BPIP17213 487 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 ENDOUP21128 410 aaKnown RBP4.36□□□□□ -1.71
BRCA2-203ENST00000528762 IGFBP6P24592 240 aaPredicted RBP4.36□□□□□ -1.71
BRCA2-203ENST00000528762 MAPKAPK2P49137 400 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 SLURP1P55000 103 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 TMEM62Q0P6H9 643 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 PAK1Q13153 545 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 KCNAB2Q13303 367 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 HLA-DQA1Q5Y7H0 255 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 ABHD17CQ6PCB6 329 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 SPATS2Q86XZ4 545 aaKnown RBP4.36□□□□□ -1.71
BRCA2-203ENST00000528762 CCDC103Q8IW40 242 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 IGSF22Q8N9C0 903 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 PCDH19Q8TAB3 1148 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 CXorf38Q8TB03 319 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 TSR2Q969E8 191 aaKnown RBP4.36□□□□□ -1.71
BRCA2-203ENST00000528762 CCDC136Q96JN2 1154 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 PTCHD1Q96NR3 888 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 SPATA25Q9BR10 227 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 TRIM8Q9BZR9 551 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 CABP5Q9NP86 173 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 GABBR1Q9UBS5 961 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 ZKSCAN5Q9Y2L8 839 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 RWDD3Q9Y3V2 267 aa4.36□□□□□ -1.71
BRCA2-203ENST00000528762 M0R2C6 588 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 CBX4O00257 560 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 TRAF5O00463 557 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 NEMP1O14524 444 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 GAS7O60861 476 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 CYBBP04839 570 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 CKMP06732 381 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 PFKLP17858 780 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 ID4P47928 161 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 IL2P60568 153 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 ST5P78524 1137 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 TMPRSS15P98073 1019 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 FOXO4P98177 505 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 FAPQ12884 760 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 MTMR1Q13613 665 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 RTP5Q14D33 572 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 PAQR3Q6TCH7 311 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 C16orf59Q7L2K0 433 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 GGNQ86UU5 652 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 RCBTB1Q8NDN9 531 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 ZNF526Q8TF50 670 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-203ENST00000528762 FBXW5Q969U6 566 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 CHAMP1Q96JM3 812 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 SYT3Q9BQG1 590 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 CCDC8Q9H0W5 538 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-203ENST00000528762 LUC7LQ9NQ29 371 aaKnown RBP4.35□□□□□ -1.71
BRCA2-203ENST00000528762 PDLIM7Q9NR12 457 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 COQ6Q9Y2Z9 468 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 SPEF1Q9Y4P9 236 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 PCDHA2Q9Y5H9 948 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 TIMM13Q9Y5L4 95 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-203ENST00000528762 PMF1-BGLAPU3KQ54 211 aa4.35□□□□□ -1.71
BRCA2-203ENST00000528762 ARID4BQ4LE39 1312 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-203ENST00000528762 FAM47E-STBD1D6RA91 191 aa4.34□□□□□ -1.71
BRCA2-203ENST00000528762 MYO1BO43795 1136 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms