RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	NFASC	O94856	1347 aa		13.4	□□□□□ -0.26
PSMC3-205	ENST00000528362	CDH23	Q9H251	3354 aa		13.4	□□□□□ -0.26
PSMC3-205	ENST00000528362	IGLV3-22	A0A075B6J6	115 aa		13.4	□□□□□ -0.26
PSMC3-205	ENST00000528362	GRXCR1	A8MXD5	290 aa		13.4	□□□□□ -0.26
PSMC3-205	ENST00000528362	RBAK-RBAKDN	I3L0D1	243 aa		13.4	□□□□□ -0.26
PSMC3-205	ENST00000528362	PFKFB2	O60825	505 aa		13.4	□□□□□ -0.26
PSMC3-205	ENST00000528362	EIF5B	O60841	1220 aa	Known RBP	13.4	□□□□□ -0.26
PSMC3-205	ENST00000528362	DEXI	O95424	95 aa		13.4	□□□□□ -0.26
PSMC3-205	ENST00000528362	DNAJB2	P25686	324 aa		13.4	□□□□□ -0.26
PSMC3-205	ENST00000528362	ZNF697	Q5TEC3	545 aa		13.4	□□□□□ -0.26
PSMC3-205	ENST00000528362	CPLX2	Q6PUV4	134 aa	Known RBP	13.4	□□□□□ -0.26
PSMC3-205	ENST00000528362	BICD2	Q8TD16	824 aa		13.4	□□□□□ -0.26
PSMC3-205	ENST00000528362	ATP6V0A1	Q93050	837 aa		13.4	□□□□□ -0.26
PSMC3-205	ENST00000528362	FAM161B	Q96MY7	647 aa		13.4	□□□□□ -0.26
PSMC3-205	ENST00000528362	AIFM3	Q96NN9	605 aa		13.4	□□□□□ -0.26
PSMC3-205	ENST00000528362	GUCD1	Q96NT3	240 aa		13.4	□□□□□ -0.26
PSMC3-205	ENST00000528362	PCYT2	Q99447	389 aa		13.4	□□□□□ -0.26
PSMC3-205	ENST00000528362	SLK	Q9H2G2	1235 aa	Predicted RBP	13.4	□□□□□ -0.26
PSMC3-205	ENST00000528362	MTIF3	Q9H2K0	278 aa	Known RBP	13.4	□□□□□ -0.26
PSMC3-205	ENST00000528362	TTYH1	Q9H313	450 aa	Predicted RBP	13.4	□□□□□ -0.26
PSMC3-205	ENST00000528362	RNPEP	Q9H4A4	650 aa		13.4	□□□□□ -0.26
PSMC3-205	ENST00000528362	SLC9A2	Q9UBY0	812 aa		13.4	□□□□□ -0.26
PSMC3-205	ENST00000528362		A0A0C4DFX4	3053 aa		13.4	□□□□□ -0.26
PSMC3-205	ENST00000528362	TREH	O43280	583 aa		13.39	□□□□□ -0.27
PSMC3-205	ENST00000528362	EDIL3	O43854	480 aa		13.39	□□□□□ -0.27
PSMC3-205	ENST00000528362	DTNB	O60941	627 aa		13.39	□□□□□ -0.27
PSMC3-205	ENST00000528362	LARGE1	O95461	756 aa		13.39	□□□□□ -0.27
PSMC3-205	ENST00000528362	MARK3	P27448	753 aa		13.39	□□□□□ -0.27
PSMC3-205	ENST00000528362	ZNF76	P36508	570 aa		13.39	□□□□□ -0.27
PSMC3-205	ENST00000528362	PBX2	P40425	430 aa		13.39	□□□□□ -0.27
PSMC3-205	ENST00000528362	NLRP5	P59047	1200 aa		13.39	□□□□□ -0.27
PSMC3-205	ENST00000528362	ACTR2	P61160	394 aa		13.39	□□□□□ -0.27
PSMC3-205	ENST00000528362	ADAM17	P78536	824 aa		13.39	□□□□□ -0.27
PSMC3-205	ENST00000528362	MBTPS1	Q14703	1052 aa		13.39	□□□□□ -0.27
PSMC3-205	ENST00000528362	ANKRD1	Q15327	319 aa		13.39	□□□□□ -0.27
PSMC3-205	ENST00000528362	NPY5R	Q15761	445 aa		13.39	□□□□□ -0.27
PSMC3-205	ENST00000528362	C8orf34	Q49A92	452 aa		13.39	□□□□□ -0.27
PSMC3-205	ENST00000528362	ZNF618	Q5T7W0	954 aa		13.39	□□□□□ -0.27
PSMC3-205	ENST00000528362	PLA2G4D	Q86XP0	818 aa		13.39	□□□□□ -0.27
PSMC3-205	ENST00000528362	LMBR1	Q8WVP7	490 aa		13.39	□□□□□ -0.27
PSMC3-205	ENST00000528362	SDF4	Q9BRK5	362 aa		13.39	□□□□□ -0.27
PSMC3-205	ENST00000528362	PBX4	Q9BYU1	374 aa		13.39	□□□□□ -0.27
PSMC3-205	ENST00000528362	SEMA6B	Q9H3T3	888 aa		13.39	□□□□□ -0.27
PSMC3-205	ENST00000528362	SETD4	Q9NVD3	440 aa		13.39	□□□□□ -0.27
PSMC3-205	ENST00000528362	EMSY	Q7Z589	1322 aa		13.39	□□□□□ -0.27
PSMC3-205	ENST00000528362	TMEM265	A0A087WTH1	108 aa		13.38	□□□□□ -0.27
PSMC3-205	ENST00000528362	ZBBX	A8MT70	800 aa		13.38	□□□□□ -0.27
PSMC3-205	ENST00000528362	NBN	O60934	754 aa		13.38	□□□□□ -0.27
PSMC3-205	ENST00000528362	LGR5	O75473	907 aa		13.38	□□□□□ -0.27
PSMC3-205	ENST00000528362	CDKL5	O76039	1030 aa		13.38	□□□□□ -0.27
PSMC3-205	ENST00000528362	CTDNEP1	O95476	244 aa		13.38	□□□□□ -0.27
PSMC3-205	ENST00000528362	CCNE2	O96020	404 aa		13.38	□□□□□ -0.27
PSMC3-205	ENST00000528362	CIITA	P33076	1130 aa		13.38	□□□□□ -0.27
PSMC3-205	ENST00000528362	GLG1	Q92896	1179 aa		13.38	□□□□□ -0.27
PSMC3-205	ENST00000528362	LENG9	Q96B70	501 aa		13.38	□□□□□ -0.27
PSMC3-205	ENST00000528362	TIFA	Q96CG3	184 aa		13.38	□□□□□ -0.27
PSMC3-205	ENST00000528362	UIMC1	Q96RL1	719 aa		13.38	□□□□□ -0.27
PSMC3-205	ENST00000528362	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.38	□□□□□ -0.27
PSMC3-205	ENST00000528362	SMARCAD1	Q9H4L7	1026 aa		13.38	□□□□□ -0.27
PSMC3-205	ENST00000528362	ERAP1	Q9NZ08	941 aa		13.38	□□□□□ -0.27
PSMC3-205	ENST00000528362	PCDHA4	Q9UN74	947 aa		13.38	□□□□□ -0.27
PSMC3-205	ENST00000528362	SLC4A7	Q9Y6M7	1214 aa		13.38	□□□□□ -0.27
PSMC3-205	ENST00000528362	NRCAM	Q92823	1304 aa		13.38	□□□□□ -0.27
PSMC3-205	ENST00000528362	STK36	Q9NRP7	1315 aa		13.38	□□□□□ -0.27
PSMC3-205	ENST00000528362	CHD9	Q3L8U1	2897 aa		13.38	□□□□□ -0.27
PSMC3-205	ENST00000528362		M0R2N6	131 aa		13.37	□□□□□ -0.27
PSMC3-205	ENST00000528362	DDX39A	O00148	427 aa	Known RBP	13.37	□□□□□ -0.27
PSMC3-205	ENST00000528362	IPO5	O00410	1097 aa	Known RBP	13.37	□□□□□ -0.27
PSMC3-205	ENST00000528362	DHX15	O43143	795 aa	Known RBP	13.37	□□□□□ -0.27
PSMC3-205	ENST00000528362	PARN	O95453	639 aa	Known RBP	13.37	□□□□□ -0.27
PSMC3-205	ENST00000528362	CXCL10	P02778	98 aa		13.37	□□□□□ -0.27
PSMC3-205	ENST00000528362	GNAT1	P11488	350 aa		13.37	□□□□□ -0.27
PSMC3-205	ENST00000528362	THPO	P40225	353 aa		13.37	□□□□□ -0.27
PSMC3-205	ENST00000528362	NEK4	P51957	841 aa		13.37	□□□□□ -0.27
PSMC3-205	ENST00000528362	SET	Q01105	290 aa	Predicted RBP	13.37	□□□□□ -0.27
PSMC3-205	ENST00000528362	PPFIA1	Q13136	1202 aa		13.37	□□□□□ -0.27
PSMC3-205	ENST00000528362	ME3	Q16798	604 aa		13.37	□□□□□ -0.27
PSMC3-205	ENST00000528362	TCTN1	Q2MV58	587 aa		13.37	□□□□□ -0.27
PSMC3-205	ENST00000528362	PRR16	Q569H4	304 aa		13.37	□□□□□ -0.27
PSMC3-205	ENST00000528362	FAM177A1	Q8N128	213 aa	Predicted RBP	13.37	□□□□□ -0.27
PSMC3-205	ENST00000528362	NECAB1	Q8N987	351 aa		13.37	□□□□□ -0.27
PSMC3-205	ENST00000528362	DAGLB	Q8NCG7	672 aa		13.37	□□□□□ -0.27
PSMC3-205	ENST00000528362	SLC17A8	Q8NDX2	589 aa		13.37	□□□□□ -0.27
PSMC3-205	ENST00000528362	STXBP5L	Q9Y2K9	1186 aa		13.37	□□□□□ -0.27
PSMC3-205	ENST00000528362	ATG7	O95352	703 aa		13.36	□□□□□ -0.27
PSMC3-205	ENST00000528362	ACTN1	P12814	892 aa		13.36	□□□□□ -0.27
PSMC3-205	ENST00000528362	ATP2A2	P16615	1042 aa	Known RBP	13.36	□□□□□ -0.27
PSMC3-205	ENST00000528362	RABGGTB	P53611	331 aa		13.36	□□□□□ -0.27
PSMC3-205	ENST00000528362	GRIK4	Q16099	956 aa		13.36	□□□□□ -0.27
PSMC3-205	ENST00000528362	GALNT17	Q6IS24	598 aa		13.36	□□□□□ -0.27
PSMC3-205	ENST00000528362	RUFY4	Q6ZNE9	571 aa		13.36	□□□□□ -0.27
PSMC3-205	ENST00000528362	BLID	Q8IZY5	108 aa		13.36	□□□□□ -0.27
PSMC3-205	ENST00000528362	GTF3C6	Q969F1	213 aa		13.36	□□□□□ -0.27
PSMC3-205	ENST00000528362	CDX2	Q99626	313 aa	Predicted RBP	13.36	□□□□□ -0.27
PSMC3-205	ENST00000528362	ZNF577	Q9BSK1	485 aa		13.36	□□□□□ -0.27
PSMC3-205	ENST00000528362	AZI2	Q9H6S1	392 aa		13.36	□□□□□ -0.27
PSMC3-205	ENST00000528362	GJB4	Q9NTQ9	266 aa		13.36	□□□□□ -0.27
PSMC3-205	ENST00000528362	KCNJ14	Q9UNX9	436 aa		13.36	□□□□□ -0.27
PSMC3-205	ENST00000528362	YBX2	Q9Y2T7	364 aa	Known RBP	13.36	□□□□□ -0.27
PSMC3-205	ENST00000528362	EYS	Q5T1H1	3165 aa		13.36	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms