RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 PKD2L1Q9P0L9 805 aa25.69■■□□□ 1.7
TRAPPC4-208ENST00000527680 LPXNO60711 386 aa25.68■■□□□ 1.7
TRAPPC4-208ENST00000527680 ATP9AO75110 1047 aa25.68■■□□□ 1.7
TRAPPC4-208ENST00000527680 UPP2O95045 317 aa25.68■■□□□ 1.7
TRAPPC4-208ENST00000527680 TCF7P36402 384 aaPredicted RBP25.68■■□□□ 1.7
TRAPPC4-208ENST00000527680 ERVK-21P61565 698 aa25.68■■□□□ 1.7
TRAPPC4-208ENST00000527680 SEPT1Q8WYJ6 367 aa25.68■■□□□ 1.7
TRAPPC4-208ENST00000527680 LMCD1Q9NZU5 365 aa25.68■■□□□ 1.7
TRAPPC4-208ENST00000527680 PCDHA6Q9UN73 950 aa25.68■■□□□ 1.7
TRAPPC4-208ENST00000527680 PCDHA8Q9Y5H6 950 aa25.68■■□□□ 1.7
TRAPPC4-208ENST00000527680 NRCAMQ92823 1304 aa25.67■■□□□ 1.7
TRAPPC4-208ENST00000527680 MTMR1Q13613 665 aa25.67■■□□□ 1.7
TRAPPC4-208ENST00000527680 TMTC3Q6ZXV5 915 aa25.67■■□□□ 1.7
TRAPPC4-208ENST00000527680 LMBR1Q8WVP7 490 aa25.67■■□□□ 1.7
TRAPPC4-208ENST00000527680 GLG1Q92896 1179 aa25.67■■□□□ 1.7
TRAPPC4-208ENST00000527680 NECAB3Q96P71 396 aaPredicted RBP25.67■■□□□ 1.7
TRAPPC4-208ENST00000527680 NEK1Q96PY6 1258 aa25.67■■□□□ 1.7
TRAPPC4-208ENST00000527680 EHMT1Q9H9B1 1298 aa25.67■■□□□ 1.7
TRAPPC4-208ENST00000527680 ITGB5P18084 799 aa25.66■■□□□ 1.7
TRAPPC4-208ENST00000527680 TRANK1O15050 2925 aa25.65■■□□□ 1.7
TRAPPC4-208ENST00000527680 KCNA2P16389 499 aa25.65■■□□□ 1.7
TRAPPC4-208ENST00000527680 MARK3P27448 753 aa25.65■■□□□ 1.7
TRAPPC4-208ENST00000527680 SGMS1Q86VZ5 419 aa25.65■■□□□ 1.7
TRAPPC4-208ENST00000527680 YME1L1Q96TA2 773 aa25.65■■□□□ 1.7
TRAPPC4-208ENST00000527680 OSBPL7Q9BZF2 842 aa25.65■■□□□ 1.7
TRAPPC4-208ENST00000527680 UBIAD1Q9Y5Z9 338 aa25.65■■□□□ 1.7
TRAPPC4-208ENST00000527680 MAFGO15525 162 aa25.64■■□□□ 1.7
TRAPPC4-208ENST00000527680 PPFIA1Q13136 1202 aa25.64■■□□□ 1.7
TRAPPC4-208ENST00000527680 BMP2KLQ5H9B9 411 aa25.64■■□□□ 1.7
TRAPPC4-208ENST00000527680 RSPH3Q86UC2 560 aa25.64■■□□□ 1.7
TRAPPC4-208ENST00000527680 FBXO22Q8NEZ5 403 aa25.64■■□□□ 1.7
TRAPPC4-208ENST00000527680 JADE2Q9NQC1 790 aa25.64■■□□□ 1.7
TRAPPC4-208ENST00000527680 RBM28Q9NW13 759 aaKnown RBP25.64■■□□□ 1.7
TRAPPC4-208ENST00000527680 ERAP1Q9NZ08 941 aa25.64■■□□□ 1.7
TRAPPC4-208ENST00000527680 MICAL3Q7RTP6 2002 aa25.64■■□□□ 1.69
TRAPPC4-208ENST00000527680 NCOR1O75376 2440 aa25.64■■□□□ 1.69
TRAPPC4-208ENST00000527680 GSTTP1A0A1W2PQM5 241 aa25.63■■□□□ 1.69
TRAPPC4-208ENST00000527680 NAPAP54920 295 aa25.63■■□□□ 1.69
TRAPPC4-208ENST00000527680 ADAM17P78536 824 aa25.63■■□□□ 1.69
TRAPPC4-208ENST00000527680 SKAP1Q86WV1 359 aa25.63■■□□□ 1.69
TRAPPC4-208ENST00000527680 APBB2Q92870 758 aa25.63■■□□□ 1.69
TRAPPC4-208ENST00000527680 TOP1MTQ969P6 601 aa25.63■■□□□ 1.69
TRAPPC4-208ENST00000527680 TCEANC2Q96MN5 208 aa25.63■■□□□ 1.69
TRAPPC4-208ENST00000527680 C17orf80Q9BSJ5 609 aa25.63■■□□□ 1.69
TRAPPC4-208ENST00000527680 IFIH1Q9BYX4 1025 aaKnown RBP25.63■■□□□ 1.69
TRAPPC4-208ENST00000527680 SMARCAD1Q9H4L7 1026 aa25.63■■□□□ 1.69
TRAPPC4-208ENST00000527680 REV3LO60673 3130 aa25.63■■□□□ 1.69
TRAPPC4-208ENST00000527680 HTRA4P83105 476 aaPredicted RBP25.62■■□□□ 1.69
TRAPPC4-208ENST00000527680 TAF2Q6P1X5 1199 aa25.62■■□□□ 1.69
TRAPPC4-208ENST00000527680 APOA5Q6Q788 366 aa25.62■■□□□ 1.69
TRAPPC4-208ENST00000527680 DHX32Q7L7V1 743 aaKnown RBP25.62■■□□□ 1.69
TRAPPC4-208ENST00000527680 NAP1L2Q9ULW6 460 aaPredicted RBP25.62■■□□□ 1.69
TRAPPC4-208ENST00000527680 V9GY48 417 aaPredicted RBP25.62■■□□□ 1.69
TRAPPC4-208ENST00000527680 ZBTB43O43298 467 aa25.61■■□□□ 1.69
TRAPPC4-208ENST00000527680 CHRNA1P02708 482 aa25.61■■□□□ 1.69
TRAPPC4-208ENST00000527680 IGBP1P78318 339 aa25.61■■□□□ 1.69
TRAPPC4-208ENST00000527680 MKRN4PQ13434 485 aaPredicted RBP25.61■■□□□ 1.69
TRAPPC4-208ENST00000527680 GRIK4Q16099 956 aa25.61■■□□□ 1.69
TRAPPC4-208ENST00000527680 RTN1Q16799 776 aa25.61■■□□□ 1.69
TRAPPC4-208ENST00000527680 FAM26DQ5JW98 314 aa25.61■■□□□ 1.69
TRAPPC4-208ENST00000527680 RUFY4Q6ZNE9 571 aa25.61■■□□□ 1.69
TRAPPC4-208ENST00000527680 CENPQQ7L2Z9 268 aaPredicted RBP25.61■■□□□ 1.69
TRAPPC4-208ENST00000527680 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.6■■□□□ 1.69
TRAPPC4-208ENST00000527680 FGD1P98174 961 aa25.6■■□□□ 1.69
TRAPPC4-208ENST00000527680 WWC2Q6AWC2 1192 aa25.6■■□□□ 1.69
TRAPPC4-208ENST00000527680 MXRA8Q9BRK3 442 aa25.6■■□□□ 1.69
TRAPPC4-208ENST00000527680 AZI2Q9H6S1 392 aa25.6■■□□□ 1.69
TRAPPC4-208ENST00000527680 TUBE1Q9UJT0 475 aa25.6■■□□□ 1.69
TRAPPC4-208ENST00000527680 COL4A4P53420 1690 aaPredicted RBP25.59■■□□□ 1.69
TRAPPC4-208ENST00000527680 SIP14410 1827 aa25.59■■□□□ 1.69
TRAPPC4-208ENST00000527680 GHRP10912 638 aa25.59■■□□□ 1.69
TRAPPC4-208ENST00000527680 EXOSC10Q01780 885 aaKnown RBP25.59■■□□□ 1.69
TRAPPC4-208ENST00000527680 DNAJB3Q8WWF6 145 aa25.59■■□□□ 1.69
TRAPPC4-208ENST00000527680 TNPO1Q92973 898 aaKnown RBP25.59■■□□□ 1.69
TRAPPC4-208ENST00000527680 SAMD11Q96NU1 681 aa25.59■■□□□ 1.69
TRAPPC4-208ENST00000527680 SDF4Q9BRK5 362 aa25.59■■□□□ 1.69
TRAPPC4-208ENST00000527680 JPH1Q9HDC5 661 aaPredicted RBP25.59■■□□□ 1.69
TRAPPC4-208ENST00000527680 RIC8AQ9NPQ8 531 aa25.59■■□□□ 1.69
TRAPPC4-208ENST00000527680 KCNH7Q9NS40 1196 aa25.59■■□□□ 1.69
TRAPPC4-208ENST00000527680 SLC9A2Q9UBY0 812 aa25.59■■□□□ 1.69
TRAPPC4-208ENST00000527680 BRPF3Q9ULD4 1205 aa25.59■■□□□ 1.69
TRAPPC4-208ENST00000527680 FOSP01100 380 aaPredicted RBP25.58■■□□□ 1.69
TRAPPC4-208ENST00000527680 ADCY7P51828 1080 aa25.58■■□□□ 1.69
TRAPPC4-208ENST00000527680 KRT32Q14532 448 aa25.58■■□□□ 1.69
TRAPPC4-208ENST00000527680 EPC2Q52LR7 807 aa25.58■■□□□ 1.69
TRAPPC4-208ENST00000527680 SP7Q8TDD2 431 aaPredicted RBP25.58■■□□□ 1.69
TRAPPC4-208ENST00000527680 PGBD1Q96JS3 809 aa25.58■■□□□ 1.69
TRAPPC4-208ENST00000527680 KLF18A0A0U1RQI7 1052 aa25.57■■□□□ 1.68
TRAPPC4-208ENST00000527680 SMCO2A6NFE2 343 aa25.57■■□□□ 1.68
TRAPPC4-208ENST00000527680 RRN3P2A6NIE6 340 aa25.57■■□□□ 1.68
TRAPPC4-208ENST00000527680 GOLGA8AA7E2F4 631 aa25.57■■□□□ 1.68
TRAPPC4-208ENST00000527680 GOLGA8BA8MQT2 603 aa25.57■■□□□ 1.68
TRAPPC4-208ENST00000527680 COL9A1P20849 921 aa25.57■■□□□ 1.68
TRAPPC4-208ENST00000527680 ZNF76P36508 570 aa25.57■■□□□ 1.68
TRAPPC4-208ENST00000527680 PTPROQ16827 1216 aa25.57■■□□□ 1.68
TRAPPC4-208ENST00000527680 ADCK5Q3MIX3 580 aa25.57■■□□□ 1.68
TRAPPC4-208ENST00000527680 RPAINQ86UA6 219 aa25.57■■□□□ 1.68
TRAPPC4-208ENST00000527680 RASEFQ8IZ41 740 aa25.57■■□□□ 1.68
TRAPPC4-208ENST00000527680 CYP2W1Q8TAV3 490 aa25.57■■□□□ 1.68
TRAPPC4-208ENST00000527680 IL17RAQ96F46 866 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms