RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 HSP90AA2PQ14568 343 aaPredicted RBP4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 RTP5Q14D33 572 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 SAFBQ15424 915 aaKnown RBP eCLIP4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 GNPTABQ3T906 1256 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 TMEM192Q8IY95 271 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 CBARPQ8N350 705 aaPredicted RBP4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 PDILTQ8N807 584 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 ANKS4BQ8N8V4 417 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 SLC16A11Q8NCK7 471 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 GJA10Q969M2 543 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 SLC6A18Q96N87 628 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 SORCS2Q96PQ0 1159 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 HERPUD2Q9BSE4 406 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 SLC52A2Q9HAB3 445 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 TCF7L1Q9HCS4 588 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 PLCB1Q9NQ66 1216 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 FAM86C1Q9NVL1 165 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 DDX20Q9UHI6 824 aaKnown RBP4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 ZNF214Q9UL59 606 aaPredicted RBP4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 GTF2A1LQ9UNN4 478 aa4.75□□□□□ -1.65
CLNS1A-208ENST00000527265 PRODHO43272 600 aa4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 TIMM44O43615 452 aa4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 ASLP04424 464 aa4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 JMJD7P0C870 316 aa4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 PYGMP11217 842 aa4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 FGFR1P11362 822 aa4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 ETV3P41162 512 aa4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 IARSP41252 1262 aaKnown RBP4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 ZNF143P52747 638 aaPredicted RBP4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 ZNF280AP59817 542 aaPredicted RBP4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 UBXN11Q5T124 520 aa4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 L1TD1Q5T7N2 865 aaKnown RBP4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 CCDC174Q6PII3 467 aa4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 EPM2AIP1Q7L775 607 aaPredicted RBP4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 IFNL2Q8IZJ0 200 aa4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 GSTCDQ8NEC7 633 aa4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 DNAJB8Q8NHS0 232 aa4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 CLIP3Q96DZ5 547 aa4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 DHRS1Q96LJ7 313 aa4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 NEUROD6Q96NK8 337 aa4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 CDC5LQ99459 802 aaKnown RBP4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 ANLNQ9NQW6 1124 aa4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 PNMA8BQ9ULN7 279 aaPredicted RBP4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 PHTF1Q9UMS5 762 aa4.74□□□□□ -1.65
CLNS1A-208ENST00000527265 FRMPD2Q68DX3 1309 aaPredicted RBP4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 M0R2C6 588 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 FZD9O00144 591 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 PMM2O15305 246 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 ZEB2O60315 1214 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 CLEC3AO75596 197 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 SNUPNO95149 360 aaKnown RBP4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 MT-CO1P00395 513 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 TP53P04637 393 aaPredicted RBP4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 MYBL2P10244 700 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 PABPC1P11940 636 aaKnown RBP4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 LPOP22079 712 aaPredicted RBP4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 IGFALSP35858 605 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 GRIA2P42262 883 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 SARSP49591 514 aaKnown RBP4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 PMS1P54277 932 aaKnown RBP4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 EPHB3P54753 998 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 CHAF1AQ13111 956 aaPredicted RBP4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 STK3Q13188 491 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 KCTD2Q14681 263 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 GAB4Q2WGN9 574 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 SLC4A8Q2Y0W8 1093 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 TDRD10Q5VZ19 366 aaKnown RBP4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 XRRA1Q6P2D8 792 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 NSMFQ6X4W1 530 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 CDH24Q86UP0 819 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 PPFIBP1Q86W92 1011 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 ZNF227Q86WZ6 799 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 C1orf131Q8NDD1 294 aaKnown RBP4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 OR2W6PQ8NHA6 318 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 PARD3BQ8TEW8 1205 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 ATXN2LQ8WWM7 1075 aaKnown RBP4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 OSBP2Q969R2 916 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 TRMT2BQ96GJ1 504 aaKnown RBP4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 FUBP3Q96I24 572 aaKnown RBP eCLIP4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 MENTQ9BUN1 341 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 LRP2BPQ9P2M1 347 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 SUSD2Q9UGT4 822 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 RCAN3Q9UKA8 241 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 CEP131Q9UPN4 1083 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 ANKRD6Q9Y2G4 727 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 IPPQ9Y573 584 aa4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 MORC2Q9Y6X9 1032 aaPredicted RBP4.73□□□□□ -1.65
CLNS1A-208ENST00000527265 C9IYK1 514 aa4.72□□□□□ -1.65
CLNS1A-208ENST00000527265 K7ESF4 209 aa4.72□□□□□ -1.65
CLNS1A-208ENST00000527265 ABLIM1O14639 778 aa4.72□□□□□ -1.65
CLNS1A-208ENST00000527265 ERC2O15083 957 aa4.72□□□□□ -1.65
CLNS1A-208ENST00000527265 ITGAVP06756 1048 aa4.72□□□□□ -1.65
CLNS1A-208ENST00000527265 ASGR2P07307 311 aa4.72□□□□□ -1.65
CLNS1A-208ENST00000527265 NAT2P11245 290 aa4.72□□□□□ -1.65
CLNS1A-208ENST00000527265 CYP2C19P33261 490 aa4.72□□□□□ -1.65
CLNS1A-208ENST00000527265 MAGEA10P43363 369 aaPredicted RBP4.72□□□□□ -1.65
CLNS1A-208ENST00000527265 KCNC1P48547 511 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms