RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 GNL2Q13823 731 aaKnown RBP12.18□□□□□ -0.46
NEDD8-205ENST00000527046 SF3A1Q15459 793 aaKnown RBP12.18□□□□□ -0.46
NEDD8-205ENST00000527046 CXCL17Q6UXB2 119 aa12.18□□□□□ -0.46
NEDD8-205ENST00000527046 ANKLE1Q8NAG6 615 aa12.18□□□□□ -0.46
NEDD8-205ENST00000527046 ARRDC4Q8NCT1 418 aa12.18□□□□□ -0.46
NEDD8-205ENST00000527046 GIMAP8Q8ND71 665 aaPredicted RBP12.18□□□□□ -0.46
NEDD8-205ENST00000527046 PPP1R13LQ8WUF5 828 aa12.18□□□□□ -0.46
NEDD8-205ENST00000527046 SEPT1Q8WYJ6 367 aa12.18□□□□□ -0.46
NEDD8-205ENST00000527046 AP5M1Q9H0R1 490 aa12.18□□□□□ -0.46
NEDD8-205ENST00000527046 JPH1Q9HDC5 661 aaPredicted RBP12.18□□□□□ -0.46
NEDD8-205ENST00000527046 WRAP73Q9P2S5 460 aaPredicted RBP12.18□□□□□ -0.46
NEDD8-205ENST00000527046 NOL7Q9UMY1 257 aaKnown RBP12.18□□□□□ -0.46
NEDD8-205ENST00000527046 LGALS2P05162 132 aa12.17□□□□□ -0.46
NEDD8-205ENST00000527046 TCF7P36402 384 aaPredicted RBP12.17□□□□□ -0.46
NEDD8-205ENST00000527046 TXKP42681 527 aa12.17□□□□□ -0.46
NEDD8-205ENST00000527046 CDK7P50613 346 aa12.17□□□□□ -0.46
NEDD8-205ENST00000527046 PSMC6P62333 389 aa12.17□□□□□ -0.46
NEDD8-205ENST00000527046 SP4Q02446 784 aa12.17□□□□□ -0.46
NEDD8-205ENST00000527046 CALCRLQ16602 461 aa12.17□□□□□ -0.46
NEDD8-205ENST00000527046 LRCH2Q5VUJ6 765 aa12.17□□□□□ -0.46
NEDD8-205ENST00000527046 ZNF746Q6NUN9 644 aaPredicted RBP12.17□□□□□ -0.46
NEDD8-205ENST00000527046 TRIM50Q86XT4 487 aa12.17□□□□□ -0.46
NEDD8-205ENST00000527046 CCDC60Q8IWA6 550 aaPredicted RBP12.17□□□□□ -0.46
NEDD8-205ENST00000527046 SLC43A3Q8NBI5 491 aa12.17□□□□□ -0.46
NEDD8-205ENST00000527046 PAWRQ96IZ0 340 aaKnown RBP12.17□□□□□ -0.46
NEDD8-205ENST00000527046 CTAGE1Q96RT6 745 aa12.17□□□□□ -0.46
NEDD8-205ENST00000527046 RNPEPQ9H4A4 650 aa12.17□□□□□ -0.46
NEDD8-205ENST00000527046 TTC12Q9H892 705 aaPredicted RBP12.17□□□□□ -0.46
NEDD8-205ENST00000527046 MORC2Q9Y6X9 1032 aaPredicted RBP12.17□□□□□ -0.46
NEDD8-205ENST00000527046 ELP1O95163 1332 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 A0A1W2PQ45 241 aaPredicted RBP12.16□□□□□ -0.46
NEDD8-205ENST00000527046 A0A1W2PQY0 241 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 MOXD2PA6NHM9 499 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 ZNF862O60290 1169 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 GAS7O60861 476 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 F2P00734 622 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 OR52Z1P0C646 297 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 SPATA31C1P0DKV0 1188 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 CAPN2P17655 700 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 PRPHP41219 470 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 TECP42680 631 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 DNM1Q05193 864 aaKnown RBP12.16□□□□□ -0.46
NEDD8-205ENST00000527046 SLC39A14Q15043 492 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 ECM1Q16610 540 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 UGCGQ16739 394 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 RNF180Q86T96 592 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 SLFN12Q8IYM2 578 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 IGSF22Q8N9C0 903 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 PCSK9Q8NBP7 692 aaKnown RBP12.16□□□□□ -0.46
NEDD8-205ENST00000527046 LINC00301Q8NCQ3 95 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 FERMT2Q96AC1 680 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 HSD17B14Q9BPX1 270 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 SDF4Q9BRK5 362 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 MMTAG2Q9BU76 263 aaKnown RBP12.16□□□□□ -0.46
NEDD8-205ENST00000527046 TEKT3Q9BXF9 490 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 DISC1Q9NRI5 854 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 POLR3EQ9NVU0 708 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 DAXXQ9UER7 740 aaPredicted RBP12.16□□□□□ -0.46
NEDD8-205ENST00000527046 RCOR1Q9UKL0 485 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 PCDHA12Q9UN75 941 aa12.16□□□□□ -0.46
NEDD8-205ENST00000527046 MAFBQ9Y5Q3 323 aaPredicted RBP12.16□□□□□ -0.46
NEDD8-205ENST00000527046 ALPK3Q96L96 1907 aa12.15□□□□□ -0.46
NEDD8-205ENST00000527046 POTEMA6NI47 508 aa12.15□□□□□ -0.46
NEDD8-205ENST00000527046 RBAK-RBAKDNI3L0D1 243 aa12.15□□□□□ -0.46
NEDD8-205ENST00000527046 SLITRK3O94933 977 aa12.15□□□□□ -0.46
NEDD8-205ENST00000527046 MYL3P08590 195 aa12.15□□□□□ -0.46
NEDD8-205ENST00000527046 SUPT20HL2P0C7V6 817 aa12.15□□□□□ -0.46
NEDD8-205ENST00000527046 ZNF286BP0CG31 522 aa12.15□□□□□ -0.46
NEDD8-205ENST00000527046 CPT1AP50416 773 aa12.15□□□□□ -0.46
NEDD8-205ENST00000527046 FXR2P51116 673 aaKnown RBP eCLIP12.15□□□□□ -0.46
NEDD8-205ENST00000527046 ADAM17P78536 824 aa12.15□□□□□ -0.46
NEDD8-205ENST00000527046 KRT76Q01546 638 aa12.15□□□□□ -0.46
NEDD8-205ENST00000527046 CEBPZQ03701 1054 aaKnown RBP12.15□□□□□ -0.46
NEDD8-205ENST00000527046 PDIA5Q14554 519 aa12.15□□□□□ -0.46
NEDD8-205ENST00000527046 SNX17Q15036 470 aa12.15□□□□□ -0.46
NEDD8-205ENST00000527046 DGKDQ16760 1214 aa12.15□□□□□ -0.46
NEDD8-205ENST00000527046 FOXD4L6Q3SYB3 417 aaPredicted RBP12.15□□□□□ -0.46
NEDD8-205ENST00000527046 SWSAP1Q6NVH7 229 aa12.15□□□□□ -0.46
NEDD8-205ENST00000527046 FOXD4L3Q6VB84 417 aaPredicted RBP12.15□□□□□ -0.46
NEDD8-205ENST00000527046 SLC39A5Q6ZMH5 540 aa12.15□□□□□ -0.46
NEDD8-205ENST00000527046 PLPPR4Q7Z2D5 763 aa12.15□□□□□ -0.46
NEDD8-205ENST00000527046 AFAP1L1Q8TED9 768 aa12.15□□□□□ -0.46
NEDD8-205ENST00000527046 LRRC15Q8TF66 581 aa12.15□□□□□ -0.46
NEDD8-205ENST00000527046 CEP89Q96ST8 783 aa12.15□□□□□ -0.46
NEDD8-205ENST00000527046 RGL1Q9NZL6 768 aa12.15□□□□□ -0.46
NEDD8-205ENST00000527046 FBXO2Q9UK22 296 aaPredicted RBP12.15□□□□□ -0.46
NEDD8-205ENST00000527046 PCDHA10Q9Y5I2 948 aa12.15□□□□□ -0.46
NEDD8-205ENST00000527046 EMSYQ7Z589 1322 aa12.14□□□□□ -0.47
NEDD8-205ENST00000527046 PP2D1A8MPX8 630 aa12.14□□□□□ -0.47
NEDD8-205ENST00000527046 H3BRB1 525 aa12.14□□□□□ -0.47
NEDD8-205ENST00000527046 LAD1O00515 517 aa12.14□□□□□ -0.47
NEDD8-205ENST00000527046 ZBTB39O15060 712 aa12.14□□□□□ -0.47
NEDD8-205ENST00000527046 CHMP2AO43633 222 aa12.14□□□□□ -0.47
NEDD8-205ENST00000527046 KPNA6O60684 536 aa12.14□□□□□ -0.47
NEDD8-205ENST00000527046 BAG4O95429 457 aaKnown RBP12.14□□□□□ -0.47
NEDD8-205ENST00000527046 MYCNP04198 464 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-205ENST00000527046 CDC25AP30304 524 aa12.14□□□□□ -0.47
NEDD8-205ENST00000527046 HOXC8P31273 242 aa12.14□□□□□ -0.47
NEDD8-205ENST00000527046 RGS19P49795 217 aa12.14□□□□□ -0.47
NEDD8-205ENST00000527046 NUCB2P80303 420 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms