RNA–Protein interactions for RNA: ENST00000526846.1

CHD7-204, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-204ENST00000526846 ZSCAN31Q96LW9 406 aaPredicted RBP18.28■□□□□ 0.52
CHD7-204ENST00000526846 PCYT2Q99447 389 aa18.28■□□□□ 0.52
CHD7-204ENST00000526846 JPH1Q9HDC5 661 aaPredicted RBP18.28■□□□□ 0.52
CHD7-204ENST00000526846 SLC9A2Q9UBY0 812 aa18.28■□□□□ 0.52
CHD7-204ENST00000526846 GBF1Q92538 1859 aa18.28■□□□□ 0.52
CHD7-204ENST00000526846 EMSYQ7Z589 1322 aa18.27■□□□□ 0.52
CHD7-204ENST00000526846 LGR5O75473 907 aa18.27■□□□□ 0.52
CHD7-204ENST00000526846 CCNE2O96020 404 aa18.27■□□□□ 0.52
CHD7-204ENST00000526846 CHMP4BP1P59074 171 aa18.27■□□□□ 0.52
CHD7-204ENST00000526846 SETQ01105 290 aaPredicted RBP18.27■□□□□ 0.52
CHD7-204ENST00000526846 FPGSQ05932 587 aa18.27■□□□□ 0.52
CHD7-204ENST00000526846 PTGISQ16647 500 aa18.27■□□□□ 0.52
CHD7-204ENST00000526846 C9orf50Q5SZB4 431 aa18.27■□□□□ 0.52
CHD7-204ENST00000526846 C16orf59Q7L2K0 433 aa18.27■□□□□ 0.52
CHD7-204ENST00000526846 WASF1Q92558 559 aa18.27■□□□□ 0.52
CHD7-204ENST00000526846 MBOAT7Q96N66 472 aa18.27■□□□□ 0.52
CHD7-204ENST00000526846 UPF2Q9HAU5 1272 aaKnown RBP18.27■□□□□ 0.52
CHD7-204ENST00000526846 SH2B1Q9NRF2 756 aaPredicted RBP18.27■□□□□ 0.52
CHD7-204ENST00000526846 PTPRSQ13332 1948 aa18.27■□□□□ 0.51
CHD7-204ENST00000526846 CYP3A7-CYP3A51PA0A087WV96 503 aa18.26■□□□□ 0.51
CHD7-204ENST00000526846 IPO5O00410 1097 aaKnown RBP18.26■□□□□ 0.51
CHD7-204ENST00000526846 SOX1O00570 391 aaPredicted RBP18.26■□□□□ 0.51
CHD7-204ENST00000526846 ATG7O95352 703 aa18.26■□□□□ 0.51
CHD7-204ENST00000526846 CSF2RAP15509 400 aa18.26■□□□□ 0.51
CHD7-204ENST00000526846 XBP1P17861 261 aa18.26■□□□□ 0.51
CHD7-204ENST00000526846 CYP3A7P24462 503 aa18.26■□□□□ 0.51
CHD7-204ENST00000526846 ACTR2P61160 394 aa18.26■□□□□ 0.51
CHD7-204ENST00000526846 ADAM17P78536 824 aa18.26■□□□□ 0.51
CHD7-204ENST00000526846 ZNF200P98182 395 aaPredicted RBP18.26■□□□□ 0.51
CHD7-204ENST00000526846 RBL2Q08999 1139 aa18.26■□□□□ 0.51
CHD7-204ENST00000526846 LRIT3Q3SXY7 679 aa18.26■□□□□ 0.51
CHD7-204ENST00000526846 UTP14CQ5TAP6 766 aaKnown RBP18.26■□□□□ 0.51
CHD7-204ENST00000526846 C7orf31Q8N865 590 aa18.26■□□□□ 0.51
CHD7-204ENST00000526846 WNT8BQ93098 351 aa18.26■□□□□ 0.51
CHD7-204ENST00000526846 LLPHQ9BRT6 129 aaKnown RBP18.26■□□□□ 0.51
CHD7-204ENST00000526846 LOXHD1Q8IVV2 1947 aa18.25■□□□□ 0.51
CHD7-204ENST00000526846 IGKV6D-21A0A0A0MT36 114 aa18.25■□□□□ 0.51
CHD7-204ENST00000526846 PITPNM1O00562 1244 aa18.25■□□□□ 0.51
CHD7-204ENST00000526846 SMIM10L2AP0DMW4 78 aa18.25■□□□□ 0.51
CHD7-204ENST00000526846 SMIM10L2BP0DMW5 78 aa18.25■□□□□ 0.51
CHD7-204ENST00000526846 NONOQ15233 471 aaKnown RBP eCLIP18.25■□□□□ 0.511e-7■■■■□ 26.2
CHD7-204ENST00000526846 SHHQ15465 462 aa18.25■□□□□ 0.51
CHD7-204ENST00000526846 TRIM71Q2Q1W2 868 aaKnown RBP18.25■□□□□ 0.51
CHD7-204ENST00000526846 PRR16Q569H4 304 aa18.25■□□□□ 0.51
CHD7-204ENST00000526846 EARS2Q5JPH6 523 aaKnown RBP18.25■□□□□ 0.51
CHD7-204ENST00000526846 KRT25Q7Z3Z0 450 aa18.25■□□□□ 0.51
CHD7-204ENST00000526846 IL27Q8NEV9 243 aa18.25■□□□□ 0.51
CHD7-204ENST00000526846 SDF4Q9BRK5 362 aa18.25■□□□□ 0.51
CHD7-204ENST00000526846 RNPEPQ9H4A4 650 aa18.25■□□□□ 0.51
CHD7-204ENST00000526846 EVPLQ92817 2033 aa18.24■□□□□ 0.51
CHD7-204ENST00000526846 MSH4O15457 936 aa18.24■□□□□ 0.51
CHD7-204ENST00000526846 TDP2O95551 362 aa18.24■□□□□ 0.51
CHD7-204ENST00000526846 MMP1P03956 469 aa18.24■□□□□ 0.51
CHD7-204ENST00000526846 CCL23P55773 120 aa18.24■□□□□ 0.51
CHD7-204ENST00000526846 PPIGQ13427 754 aaKnown RBP eCLIP18.24■□□□□ 0.511e-7■□□□□ 8.7
CHD7-204ENST00000526846 INF2Q27J81 1249 aa18.24■□□□□ 0.51
CHD7-204ENST00000526846 Q4G0T1 1027 aa18.24■□□□□ 0.51
CHD7-204ENST00000526846 MOXD1Q6UVY6 613 aa18.24■□□□□ 0.51
CHD7-204ENST00000526846 ABHD15Q6UXT9 468 aa18.24■□□□□ 0.51
CHD7-204ENST00000526846 TMEM199Q8N511 208 aa18.24■□□□□ 0.51
CHD7-204ENST00000526846 SCLYQ96I15 445 aa18.24■□□□□ 0.51
CHD7-204ENST00000526846 UIMC1Q96RL1 719 aa18.24■□□□□ 0.51
CHD7-204ENST00000526846 ZNF577Q9BSK1 485 aa18.24■□□□□ 0.51
CHD7-204ENST00000526846 ZNF215Q9UL58 517 aaPredicted RBP18.24■□□□□ 0.51
CHD7-204ENST00000526846 FAM205CA6NFA0 338 aa18.23■□□□□ 0.51
CHD7-204ENST00000526846 NR5A1Q13285 461 aa18.23■□□□□ 0.51
CHD7-204ENST00000526846 PTK7Q13308 1070 aa18.23■□□□□ 0.51
CHD7-204ENST00000526846 TMEM240Q5SV17 173 aa18.23■□□□□ 0.51
CHD7-204ENST00000526846 KRT40Q6A162 431 aa18.23■□□□□ 0.51
CHD7-204ENST00000526846 TRAF7Q6Q0C0 670 aa18.23■□□□□ 0.51
CHD7-204ENST00000526846 SERINC5Q86VE9 423 aa18.23■□□□□ 0.51
CHD7-204ENST00000526846 CAGE1Q8TC20 777 aa18.23■□□□□ 0.51
CHD7-204ENST00000526846 SLC5A5Q92911 643 aa18.23■□□□□ 0.51
CHD7-204ENST00000526846 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.23■□□□□ 0.511e-7■■□□□ 11.9
CHD7-204ENST00000526846 IL23AQ9NPF7 189 aa18.23■□□□□ 0.51
CHD7-204ENST00000526846 TBC1D22BQ9NU19 505 aa18.23■□□□□ 0.51
CHD7-204ENST00000526846 DDX39AO00148 427 aaKnown RBP18.22■□□□□ 0.51
CHD7-204ENST00000526846 ST18O60284 1047 aa18.22■□□□□ 0.51
CHD7-204ENST00000526846 KRT2P35908 639 aa18.22■□□□□ 0.51
CHD7-204ENST00000526846 GPNMBQ14956 572 aa18.22■□□□□ 0.51
CHD7-204ENST00000526846 RASIP1Q5U651 963 aa18.22■□□□□ 0.51
CHD7-204ENST00000526846 B3GNT9Q6UX72 402 aa18.22■□□□□ 0.51
CHD7-204ENST00000526846 ETNPPLQ8TBG4 499 aa18.22■□□□□ 0.51
CHD7-204ENST00000526846 LMBR1Q8WVP7 490 aa18.22■□□□□ 0.51
CHD7-204ENST00000526846 SMARCAD1Q9H4L7 1026 aa18.22■□□□□ 0.51
CHD7-204ENST00000526846 SETD4Q9NVD3 440 aa18.22■□□□□ 0.51
CHD7-204ENST00000526846 ERAP1Q9NZ08 941 aa18.22■□□□□ 0.51
CHD7-204ENST00000526846 NOD1Q9Y239 953 aa18.22■□□□□ 0.51
CHD7-204ENST00000526846 MICAL3Q7RTP6 2002 aa18.22■□□□□ 0.51
CHD7-204ENST00000526846 CCDC194A0A1B0GVG4 234 aa18.21■□□□□ 0.51
CHD7-204ENST00000526846 C17orf102A2RUQ5 167 aa18.21■□□□□ 0.51
CHD7-204ENST00000526846 TREHO43280 583 aa18.21■□□□□ 0.51
CHD7-204ENST00000526846 SLC37A4O43826 429 aa18.21■□□□□ 0.51
CHD7-204ENST00000526846 IQCF3P0C7M6 154 aa18.21■□□□□ 0.51
CHD7-204ENST00000526846 ACRP10323 421 aa18.21■□□□□ 0.51
CHD7-204ENST00000526846 FOSBP53539 338 aa18.21■□□□□ 0.51
CHD7-204ENST00000526846 BFSP2Q13515 415 aa18.21■□□□□ 0.51
CHD7-204ENST00000526846 ZNF746Q6NUN9 644 aaPredicted RBP18.21■□□□□ 0.51
CHD7-204ENST00000526846 PIK3AP1Q6ZUJ8 805 aa18.21■□□□□ 0.51
CHD7-204ENST00000526846 PLPPR4Q7Z2D5 763 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms