RNA–Protein interactions for RNA: ENST00000526163.5

NXF1-203, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-203ENST00000526163 ZNF286BP0CG31 522 aa12.93□□□□□ -0.34
NXF1-203ENST00000526163 RAG1P15918 1043 aa12.93□□□□□ -0.34
NXF1-203ENST00000526163 SYN1P17600 705 aa12.93□□□□□ -0.34
NXF1-203ENST00000526163 BMP8BP34820 402 aa12.93□□□□□ -0.34
NXF1-203ENST00000526163 ACTR2P61160 394 aa12.93□□□□□ -0.34
NXF1-203ENST00000526163 KRT76Q01546 638 aa12.93□□□□□ -0.34
NXF1-203ENST00000526163 SP4Q02446 784 aa12.93□□□□□ -0.34
NXF1-203ENST00000526163 ITGB3BPQ13352 177 aaPredicted RBP12.93□□□□□ -0.34
NXF1-203ENST00000526163 FAM47CQ5HY64 1035 aa12.93□□□□□ -0.34
NXF1-203ENST00000526163 ZNF746Q6NUN9 644 aaPredicted RBP12.93□□□□□ -0.34
NXF1-203ENST00000526163 TNPO1Q92973 898 aaKnown RBP12.93□□□□□ -0.34
NXF1-203ENST00000526163 TRIM43Q96BQ3 446 aaPredicted RBP12.93□□□□□ -0.34
NXF1-203ENST00000526163 FOXP1Q9H334 677 aaPredicted RBP12.93□□□□□ -0.34
NXF1-203ENST00000526163 SMARCAD1Q9H4L7 1026 aa12.93□□□□□ -0.34
NXF1-203ENST00000526163 AZI2Q9H6S1 392 aa12.93□□□□□ -0.34
NXF1-203ENST00000526163 GTF2IRD1Q9UHL9 959 aa12.93□□□□□ -0.34
NXF1-203ENST00000526163 TBX21Q9UL17 535 aa12.93□□□□□ -0.34
NXF1-203ENST00000526163 EMSYQ7Z589 1322 aa12.92□□□□□ -0.34
NXF1-203ENST00000526163 TBX3O15119 743 aa12.92□□□□□ -0.34
NXF1-203ENST00000526163 MSH4O15457 936 aa12.92□□□□□ -0.34
NXF1-203ENST00000526163 LGR5O75473 907 aa12.92□□□□□ -0.34
NXF1-203ENST00000526163 TIMP1P01033 207 aa12.92□□□□□ -0.34
NXF1-203ENST00000526163 GNAT1P11488 350 aa12.92□□□□□ -0.34
NXF1-203ENST00000526163 SLC26A2P50443 739 aa12.92□□□□□ -0.34
NXF1-203ENST00000526163 NR5A1Q13285 461 aa12.92□□□□□ -0.34
NXF1-203ENST00000526163 CUL4AQ13619 759 aa12.92□□□□□ -0.34
NXF1-203ENST00000526163 LETM2Q2VYF4 491 aa12.92□□□□□ -0.34
NXF1-203ENST00000526163 PLPPR4Q7Z2D5 763 aa12.92□□□□□ -0.34
NXF1-203ENST00000526163 SH3RF1Q7Z6J0 888 aa12.92□□□□□ -0.34
NXF1-203ENST00000526163 SMAP1Q8IYB5 467 aaPredicted RBP12.92□□□□□ -0.34
NXF1-203ENST00000526163 SLC5A5Q92911 643 aa12.92□□□□□ -0.34
NXF1-203ENST00000526163 FAM20AQ96MK3 541 aa12.92□□□□□ -0.34
NXF1-203ENST00000526163 GDF15Q99988 308 aa12.92□□□□□ -0.34
NXF1-203ENST00000526163 TRPV6Q9H1D0 765 aa12.92□□□□□ -0.34
NXF1-203ENST00000526163 ERAP1Q9NZ08 941 aa12.92□□□□□ -0.34
NXF1-203ENST00000526163 DDX25Q9UHL0 483 aaKnown RBP12.92□□□□□ -0.34
NXF1-203ENST00000526163 SMC3Q9UQE7 1217 aa12.92□□□□□ -0.34
NXF1-203ENST00000526163 MYH9P35579 1960 aaKnown RBP12.91□□□□□ -0.34
NXF1-203ENST00000526163 IGKV6D-21A0A0A0MT36 114 aa12.91□□□□□ -0.34
NXF1-203ENST00000526163 A0A1W2PPC1 479 aa12.91□□□□□ -0.34
NXF1-203ENST00000526163 TDP2O95551 362 aa12.91□□□□□ -0.34
NXF1-203ENST00000526163 CHMP4BP1P59074 171 aa12.91□□□□□ -0.34
NXF1-203ENST00000526163 PTGISQ16647 500 aa12.91□□□□□ -0.34
NXF1-203ENST00000526163 UTP14CQ5TAP6 766 aaKnown RBP12.91□□□□□ -0.34
NXF1-203ENST00000526163 MIS18BP1Q6P0N0 1132 aa12.91□□□□□ -0.34
NXF1-203ENST00000526163 GLG1Q92896 1179 aa12.91□□□□□ -0.34
NXF1-203ENST00000526163 SNX21Q969T3 373 aa12.91□□□□□ -0.34
NXF1-203ENST00000526163 TRMT13Q9NUP7 481 aaKnown RBP12.91□□□□□ -0.34
NXF1-203ENST00000526163 HDAC6Q9UBN7 1215 aa12.91□□□□□ -0.34
NXF1-203ENST00000526163 NOD1Q9Y239 953 aa12.91□□□□□ -0.34
NXF1-203ENST00000526163 NRCAMQ92823 1304 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 LTBP2Q14767 1821 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 K7ELQ4 463 aaPredicted RBP12.9□□□□□ -0.34
NXF1-203ENST00000526163 PITPNM1O00562 1244 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 CCNT1O60563 726 aaKnown RBP12.9□□□□□ -0.34
NXF1-203ENST00000526163 GAS7O60861 476 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 PSMD10O75832 226 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 CCNE2O96020 404 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 U2AF2P26368 475 aaKnown RBP eCLIP12.9□□□□□ -0.346e-10■■■□□ 14.7
NXF1-203ENST00000526163 GJB2P29033 226 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 HOXC8P31273 242 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 SFNP31947 248 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 MAGEA10P43363 369 aaPredicted RBP12.9□□□□□ -0.34
NXF1-203ENST00000526163 STAT5BP51692 787 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 JAK3P52333 1124 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 FOSBP53539 338 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 GUCY1B3Q02153 619 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 ORC2Q13416 577 aaPredicted RBP12.9□□□□□ -0.34
NXF1-203ENST00000526163 GNL2Q13823 731 aaKnown RBP12.9□□□□□ -0.34
NXF1-203ENST00000526163 LRCH2Q5VUJ6 765 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 FAM160B1Q5W0V3 765 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 GDF6Q6KF10 455 aaPredicted RBP12.9□□□□□ -0.34
NXF1-203ENST00000526163 MFSD5Q6N075 450 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 ABHD15Q6UXT9 468 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 SLFN12Q8IYM2 578 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 TMEM199Q8N511 208 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 CCDC155Q8N6L0 562 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 RDM1Q8NG50 284 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 ETNPPLQ8TBG4 499 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 AFAP1L1Q8TED9 768 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 INTS4Q96HW7 963 aaKnown RBP12.9□□□□□ -0.34
NXF1-203ENST00000526163 TEKT3Q9BXF9 490 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 PRO3102Q9H379 93 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 HIPK3Q9H422 1215 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 TELO2Q9Y4R8 837 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 PCDHA10Q9Y5I2 948 aa12.9□□□□□ -0.34
NXF1-203ENST00000526163 TRIP12Q14669 1992 aaPredicted RBP12.89□□□□□ -0.35
NXF1-203ENST00000526163 C17orf102A2RUQ5 167 aa12.89□□□□□ -0.35
NXF1-203ENST00000526163 WDR64B1ANS9 1081 aa12.89□□□□□ -0.35
NXF1-203ENST00000526163 DDX39AO00148 427 aaKnown RBP12.89□□□□□ -0.35
NXF1-203ENST00000526163 BAG4O95429 457 aaKnown RBP12.89□□□□□ -0.35
NXF1-203ENST00000526163 PSAPP07602 524 aa12.89□□□□□ -0.35
NXF1-203ENST00000526163 SMIM10L2AP0DMW4 78 aa12.89□□□□□ -0.35
NXF1-203ENST00000526163 SMIM10L2BP0DMW5 78 aa12.89□□□□□ -0.35
NXF1-203ENST00000526163 PDCP20941 246 aa12.89□□□□□ -0.35
NXF1-203ENST00000526163 TRAPPC10P48553 1259 aa12.89□□□□□ -0.35
NXF1-203ENST00000526163 FXR1P51114 621 aaKnown RBP eCLIP12.89□□□□□ -0.35
NXF1-203ENST00000526163 RBL2Q08999 1139 aa12.89□□□□□ -0.35
NXF1-203ENST00000526163 PTK7Q13308 1070 aa12.89□□□□□ -0.35
NXF1-203ENST00000526163 BFSP2Q13515 415 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms