RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 GLG1Q92896 1179 aa7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 FAM84BQ96KN1 310 aaPredicted RBP7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 CCDC77Q9BR77 488 aa7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 ZC3H12CQ9C0D7 883 aaKnown RBP7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 GCNT4Q9P109 453 aa7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 PNMA2Q9UL42 364 aa7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 PCDHA6Q9UN73 950 aa7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 REXO2Q9Y3B8 237 aaKnown RBP7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 PCDHA8Q9Y5H6 950 aa7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 ZNF804BA4D1E1 1349 aa7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 A0A087X0T9 212 aa7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 GDF11O95390 407 aa7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 HLA-DOAP06340 250 aa7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 FAM228BP0C875 321 aa7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 SRGNP10124 158 aa7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 KRT15P19012 456 aa7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 FGFR4P22455 802 aa7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 SARSP49591 514 aaKnown RBP7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 KCNH2Q12809 1159 aa7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 CTTNQ14247 550 aaKnown RBP7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 SETDB1Q15047 1291 aa7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 SEL1L2Q5TEA6 688 aa7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 TXNRD3Q86VQ6 643 aa7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 IL17RAQ96F46 866 aa7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 CEP95Q96GE4 821 aa7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 BHMT2Q9H2M3 363 aa7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.58□□□□□ -1.21e-7■■■■□ 19.9
TGFBR3-207ENST00000525962 FRMD4BQ9Y2L6 1034 aa7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 IKBKGQ9Y6K9 419 aa7.58□□□□□ -1.2
TGFBR3-207ENST00000525962 STK36Q9NRP7 1315 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 ABCC12Q96J65 1359 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 PGRMC1O00264 195 aaKnown RBP7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 SART1O43290 800 aaKnown RBP7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 PPP1R37O75864 691 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 POTEJP0CG39 1038 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 PDHBP11177 359 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 STX2P32856 288 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 KCNJ1P48048 391 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 PARP10Q53GL7 1025 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 RBM26Q5T8P6 1007 aaKnown RBP7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 NUGGCQ68CJ6 796 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 EMBQ6PCB8 327 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 TCHPQ9BT92 498 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 HEMGNQ9BXL5 484 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 DBR1Q9UK59 544 aaKnown RBP7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 MTUS1Q9ULD2 1270 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 DAAM1Q9Y4D1 1078 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 WDR17Q8IZU2 1322 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 MMEP08473 750 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 PLA2G4BP0C869 781 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 DLATP10515 647 aaKnown RBP7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 CYP19A1P11511 503 aaPredicted RBP7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 RPL13P26373 211 aaKnown RBP7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 IL6STP40189 918 aaPredicted RBP7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 GSTO1P78417 241 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 CXorf56Q9H5V9 222 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 AZI2Q9H6S1 392 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 NKRFO15226 690 aaKnown RBP eCLIP7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 MEFVO15553 781 aaPredicted RBP7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 ITGA4P13612 1032 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 ATP11AP98196 1134 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 IL17AQ16552 155 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 HNRNPLLQ8WVV9 542 aaKnown RBP7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 CASKIN2Q8WXE0 1202 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 KLHL29Q96CT2 875 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 FMO2Q99518 471 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 MTRQ99707 1265 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 NUDT12Q9BQG2 462 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 SH2D4AQ9H788 454 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 KLC4Q9NSK0 619 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 USP40Q9NVE5 1235 aa7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 SCAF8Q9UPN6 1271 aaKnown RBP7.57□□□□□ -1.2
TGFBR3-207ENST00000525962 PSMD14O00487 310 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 CSF1RP07333 972 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 TRAPPC10P48553 1259 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 CDK8P49336 464 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 SARNPP82979 210 aaKnown RBP7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 BIRC3Q13489 604 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 C2CD6Q53TS8 623 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 WDR59Q6PJI9 974 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 ZNF365Q70YC5 407 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 CCDC197Q8NCU1 140 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 HAUS1Q96CS2 278 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 IQCGQ9H095 443 aaKnown RBP7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 GMNCA6NCL1 334 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 USP17L10C9JJH3 530 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 SEMA3EO15041 775 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 ATMINO43313 823 aaPredicted RBP7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 PDHA1P08559 390 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 PLCG2P16885 1265 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 ADCY8P40145 1251 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 COASYQ13057 564 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 SYCP2LQ5T4T6 812 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 ALS2CLQ60I27 953 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 PDXDC2PQ6P474 469 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 C3orf67Q6ZVT6 689 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 SFR1Q86XK3 245 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 PRPF38AQ8NAV1 312 aaKnown RBP7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 HVCN1Q96D96 273 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms