RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 VSNL1P62760 191 aa18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 KCNMA1Q12791 1236 aa18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 CAGE1Q8TC20 777 aa18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 SMCR8Q8TEV9 937 aaPredicted RBP18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 LENG9Q96B70 501 aa18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 ALS2CR12Q96Q35 445 aa18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 MMS19Q96T76 1030 aa18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 FGFBP2Q9BYJ0 223 aa18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 ABCB6Q9NP58 842 aa18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 TMOD2Q9NZR1 351 aa18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 TARSL2A2RTX5 802 aaKnown RBP18.22■□□□□ 0.51
CCDC90B-203ENST00000525503 PJA2O43164 708 aa18.22■□□□□ 0.51
CCDC90B-203ENST00000525503 ZNF76P36508 570 aa18.22■□□□□ 0.51
CCDC90B-203ENST00000525503 MAGEA1P43355 309 aa18.22■□□□□ 0.51
CCDC90B-203ENST00000525503 SLC9C1Q4G0N8 1177 aa18.22■□□□□ 0.51
CCDC90B-203ENST00000525503 C7orf43Q8WVR3 580 aa18.22■□□□□ 0.51
CCDC90B-203ENST00000525503 ZHX3Q9H4I2 956 aa18.22■□□□□ 0.51
CCDC90B-203ENST00000525503 ARHGEF10LQ9HCE6 1279 aa18.22■□□□□ 0.51
CCDC90B-203ENST00000525503 JADE2Q9NQC1 790 aa18.22■□□□□ 0.51
CCDC90B-203ENST00000525503 L1RE1Q9UN81 338 aa18.22■□□□□ 0.51
CCDC90B-203ENST00000525503 FAM86B1E9PN63 330 aa18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 SRGAP2O75044 1071 aa18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 FAM86B2P0C5J1 330 aa18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 EPS15P42566 896 aa18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 CACNB1Q02641 598 aaPredicted RBP18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 ADAM9Q13443 819 aa18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 GIT2Q14161 759 aa18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 SFMBT2Q5VUG0 894 aa18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 POLR3CQ9BUI4 534 aaPredicted RBP18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 LSM14BQ9BX40 385 aaKnown RBP18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 LUC7LQ9NQ29 371 aaKnown RBP18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 ZNF646O15015 1829 aaPredicted RBP18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 POLR3GO15318 223 aaPredicted RBP18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 MSH4O15457 936 aa18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 SERPING1P05155 500 aa18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 SPATA31C1P0DKV0 1188 aa18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 PRLRP16471 622 aa18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 RAD51AP2Q09MP3 1159 aa18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 ASTE1Q2TB18 679 aaPredicted RBP18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 FAM83BQ5T0W9 1011 aa18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 CAPZA3Q96KX2 299 aa18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 PRMT6Q96LA8 375 aaPredicted RBP18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 PRR12Q9ULL5 1215 aa18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 SNX12Q9UMY4 172 aa18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 SCN9AQ15858 1988 aa18.21■□□□□ 0.51
CCDC90B-203ENST00000525503 RBAK-RBAKDNI3L0D1 243 aa18.2■□□□□ 0.5
CCDC90B-203ENST00000525503 ERCC3P19447 782 aa18.2■□□□□ 0.5
CCDC90B-203ENST00000525503 CHRNA5P30532 468 aa18.2■□□□□ 0.5
CCDC90B-203ENST00000525503 STAT2P52630 851 aa18.2■□□□□ 0.5
CCDC90B-203ENST00000525503 JAG1P78504 1218 aa18.2■□□□□ 0.5
CCDC90B-203ENST00000525503 PABPC4Q13310 644 aaKnown RBP eCLIP18.2■□□□□ 0.5
CCDC90B-203ENST00000525503 MAP9Q49MG5 647 aa18.2■□□□□ 0.5
CCDC90B-203ENST00000525503 CCDC155Q8N6L0 562 aa18.2■□□□□ 0.5
CCDC90B-203ENST00000525503 ACBD3Q9H3P7 528 aa18.2■□□□□ 0.5
CCDC90B-203ENST00000525503 VAV3Q9UKW4 847 aa18.2■□□□□ 0.5
CCDC90B-203ENST00000525503 TRAF3IP3Q9Y228 551 aa18.2■□□□□ 0.5
CCDC90B-203ENST00000525503 SLX4Q8IY92 1834 aa18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 MEIS1O00470 390 aa18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 OPLAHO14841 1288 aa18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 PPIP5K2O43314 1243 aa18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 CALUO43852 315 aaPredicted RBP18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 NOL4O94818 638 aa18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 KNOP1Q1ED39 458 aaKnown RBP18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 TDRD12Q587J7 1177 aaKnown RBP18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 HGSNATQ68CP4 663 aa18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 FRMD5Q7Z6J6 570 aa18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 REEP2Q9BRK0 252 aa18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 GOPCQ9HD26 462 aa18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 ZHX1Q9UKY1 873 aaPredicted RBP18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 A0A1W2PRG0 241 aa18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 MOCS3O95396 460 aa18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 NR2F2P24468 414 aa18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 HOXA13P31271 388 aaPredicted RBP18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 PSMC6P62333 389 aa18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 RRP1BQ14684 758 aaKnown RBP18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 CCDC70Q6NSX1 233 aa18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 EPM2AIP1Q7L775 607 aaPredicted RBP18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 RNF10Q8N5U6 811 aaKnown RBP18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 MLXIPQ9HAP2 919 aa18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 NLRC4Q9NPP4 1024 aa18.19■□□□□ 0.5
CCDC90B-203ENST00000525503 PDXKO00764 312 aa18.18■□□□□ 0.5
CCDC90B-203ENST00000525503 EYA4O95677 639 aa18.18■□□□□ 0.5
CCDC90B-203ENST00000525503 POLR2FP61218 127 aaKnown RBP18.18■□□□□ 0.5
CCDC90B-203ENST00000525503 GRIPAP1Q4V328 841 aa18.18■□□□□ 0.5
CCDC90B-203ENST00000525503 ZNF772Q68DY9 489 aaPredicted RBP18.18■□□□□ 0.5
CCDC90B-203ENST00000525503 SFR1Q86XK3 245 aa18.18■□□□□ 0.5
CCDC90B-203ENST00000525503 NOX5Q96PH1 765 aa18.18■□□□□ 0.5
CCDC90B-203ENST00000525503 EIF2AK1Q9BQI3 630 aaKnown RBP18.18■□□□□ 0.5
CCDC90B-203ENST00000525503 TMX2Q9Y320 296 aa18.18■□□□□ 0.5
CCDC90B-203ENST00000525503 CAPN6Q9Y6Q1 641 aa18.18■□□□□ 0.5
CCDC90B-203ENST00000525503 TBCAO75347 108 aaKnown RBP18.17■□□□□ 0.5
CCDC90B-203ENST00000525503 GAP43P17677 238 aa18.17■□□□□ 0.5
CCDC90B-203ENST00000525503 TCP1P17987 556 aaKnown RBP18.17■□□□□ 0.5
CCDC90B-203ENST00000525503 ITIH3Q06033 890 aa18.17■□□□□ 0.5
CCDC90B-203ENST00000525503 GFPT1Q06210 699 aaPredicted RBP18.17■□□□□ 0.5
CCDC90B-203ENST00000525503 BMT2Q1RMZ1 405 aa18.17■□□□□ 0.5
CCDC90B-203ENST00000525503 ZNF572Q7Z3I7 529 aaPredicted RBP18.17■□□□□ 0.5
CCDC90B-203ENST00000525503 SPICE1Q8N0Z3 855 aa18.17■□□□□ 0.5
CCDC90B-203ENST00000525503 EHMT1Q9H9B1 1298 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms