RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 PTK7Q13308 1070 aa21.07■□□□□ 0.96
TSPAN4-215ENST00000525334 ITGB3BPQ13352 177 aaPredicted RBP21.07■□□□□ 0.96
TSPAN4-215ENST00000525334 ME3Q16798 604 aa21.07■□□□□ 0.96
TSPAN4-215ENST00000525334 RASIP1Q5U651 963 aa21.07■□□□□ 0.96
TSPAN4-215ENST00000525334 PLA2G4DQ86XP0 818 aa21.07■□□□□ 0.96
TSPAN4-215ENST00000525334 RPUSD2Q8IZ73 545 aaKnown RBP21.07■□□□□ 0.96
TSPAN4-215ENST00000525334 AFAP1L1Q8TED9 768 aa21.07■□□□□ 0.96
TSPAN4-215ENST00000525334 SDF4Q9BRK5 362 aa21.07■□□□□ 0.96
TSPAN4-215ENST00000525334 SLC9A2Q9UBY0 812 aa21.07■□□□□ 0.96
TSPAN4-215ENST00000525334 PCDHA4Q9UN74 947 aa21.07■□□□□ 0.96
TSPAN4-215ENST00000525334 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.06■□□□□ 0.96
TSPAN4-215ENST00000525334 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.06■□□□□ 0.96
TSPAN4-215ENST00000525334 FGBP02675 491 aa21.06■□□□□ 0.96
TSPAN4-215ENST00000525334 DEFB128Q7Z7B8 93 aa21.06■□□□□ 0.96
TSPAN4-215ENST00000525334 NECAB1Q8N987 351 aa21.06■□□□□ 0.96
TSPAN4-215ENST00000525334 HERVK_113Q902F9 699 aa21.06■□□□□ 0.96
TSPAN4-215ENST00000525334 WNT8BQ93098 351 aa21.06■□□□□ 0.96
TSPAN4-215ENST00000525334 TRIP12Q14669 1992 aaPredicted RBP21.05■□□□□ 0.96
TSPAN4-215ENST00000525334 PFKMP08237 780 aa21.05■□□□□ 0.96
TSPAN4-215ENST00000525334 RFC2P35250 354 aa21.05■□□□□ 0.96
TSPAN4-215ENST00000525334 NPY5RQ15761 445 aa21.05■□□□□ 0.96
TSPAN4-215ENST00000525334 TRIM71Q2Q1W2 868 aaKnown RBP21.05■□□□□ 0.96
TSPAN4-215ENST00000525334 LRRC8DQ7L1W4 858 aa21.05■□□□□ 0.96
TSPAN4-215ENST00000525334 OTOP2Q7RTS6 562 aa21.05■□□□□ 0.96
TSPAN4-215ENST00000525334 SERINC5Q86VE9 423 aa21.05■□□□□ 0.96
TSPAN4-215ENST00000525334 FAM177A1Q8N128 213 aaPredicted RBP21.05■□□□□ 0.96
TSPAN4-215ENST00000525334 DAGLBQ8NCG7 672 aa21.05■□□□□ 0.96
TSPAN4-215ENST00000525334 ATP6V0A1Q93050 837 aa21.05■□□□□ 0.96
TSPAN4-215ENST00000525334 GTF3C6Q969F1 213 aa21.05■□□□□ 0.96
TSPAN4-215ENST00000525334 RNPEPQ9H4A4 650 aa21.05■□□□□ 0.96
TSPAN4-215ENST00000525334 CXXC1Q9P0U4 656 aaPredicted RBP21.05■□□□□ 0.96
TSPAN4-215ENST00000525334 EMSYQ7Z589 1322 aa21.04■□□□□ 0.96
TSPAN4-215ENST00000525334 CKBP12277 381 aa21.04■□□□□ 0.96
TSPAN4-215ENST00000525334 SELPP16109 830 aa21.04■□□□□ 0.96
TSPAN4-215ENST00000525334 ACTR2P61160 394 aa21.04■□□□□ 0.96
TSPAN4-215ENST00000525334 SETQ01105 290 aaPredicted RBP21.04■□□□□ 0.96
TSPAN4-215ENST00000525334 BLIDQ8IZY5 108 aa21.04■□□□□ 0.96
TSPAN4-215ENST00000525334 GLG1Q92896 1179 aa21.04■□□□□ 0.96
TSPAN4-215ENST00000525334 PCYT2Q99447 389 aa21.04■□□□□ 0.96
TSPAN4-215ENST00000525334 SEMA6BQ9H3T3 888 aa21.04■□□□□ 0.96
TSPAN4-215ENST00000525334 SETD4Q9NVD3 440 aa21.04■□□□□ 0.96
TSPAN4-215ENST00000525334 KCNJ14Q9UNX9 436 aa21.04■□□□□ 0.96
TSPAN4-215ENST00000525334 M0R2N6 131 aa21.03■□□□□ 0.96
TSPAN4-215ENST00000525334 DDX39AO00148 427 aaKnown RBP21.03■□□□□ 0.96
TSPAN4-215ENST00000525334 TREHO43280 583 aa21.03■□□□□ 0.96
TSPAN4-215ENST00000525334 EDIL3O43854 480 aa21.03■□□□□ 0.96
TSPAN4-215ENST00000525334 LGR5O75473 907 aa21.03■□□□□ 0.96
TSPAN4-215ENST00000525334 MARK3P27448 753 aa21.03■□□□□ 0.96
TSPAN4-215ENST00000525334 CIITAP33076 1130 aa21.03■□□□□ 0.96
TSPAN4-215ENST00000525334 PRR16Q569H4 304 aa21.03■□□□□ 0.96
TSPAN4-215ENST00000525334 ZNF697Q5TEC3 545 aa21.03■□□□□ 0.96
TSPAN4-215ENST00000525334 GALNT17Q6IS24 598 aa21.03■□□□□ 0.96
TSPAN4-215ENST00000525334 UIMC1Q96RL1 719 aa21.03■□□□□ 0.96
TSPAN4-215ENST00000525334 MTIF3Q9H2K0 278 aaKnown RBP21.03■□□□□ 0.96
TSPAN4-215ENST00000525334 SMARCAD1Q9H4L7 1026 aa21.03■□□□□ 0.96
TSPAN4-215ENST00000525334 ERAP1Q9NZ08 941 aa21.03■□□□□ 0.96
TSPAN4-215ENST00000525334 STXBP5LQ9Y2K9 1186 aa21.03■□□□□ 0.96
TSPAN4-215ENST00000525334 IPO5O00410 1097 aaKnown RBP21.02■□□□□ 0.96
TSPAN4-215ENST00000525334 DHX15O43143 795 aaKnown RBP21.02■□□□□ 0.96
TSPAN4-215ENST00000525334 CCNE2O96020 404 aa21.02■□□□□ 0.96
TSPAN4-215ENST00000525334 GNAT1P11488 350 aa21.02■□□□□ 0.96
TSPAN4-215ENST00000525334 GPNMBQ14956 572 aa21.02■□□□□ 0.96
TSPAN4-215ENST00000525334 TRAF7Q6Q0C0 670 aa21.02■□□□□ 0.96
TSPAN4-215ENST00000525334 TBCKQ8TEA7 893 aa21.02■□□□□ 0.96
TSPAN4-215ENST00000525334 LMBR1Q8WVP7 490 aa21.02■□□□□ 0.96
TSPAN4-215ENST00000525334 LENG9Q96B70 501 aa21.02■□□□□ 0.96
TSPAN4-215ENST00000525334 FAM161BQ96MY7 647 aa21.02■□□□□ 0.96
TSPAN4-215ENST00000525334 GUCD1Q96NT3 240 aa21.02■□□□□ 0.96
TSPAN4-215ENST00000525334 KIF2CQ99661 725 aa21.02■□□□□ 0.96
TSPAN4-215ENST00000525334 ZNF577Q9BSK1 485 aa21.02■□□□□ 0.96
TSPAN4-215ENST00000525334 PHF20Q9BVI0 1012 aa21.02■□□□□ 0.96
TSPAN4-215ENST00000525334 C22orf23Q9BZE7 217 aa21.02■□□□□ 0.96
TSPAN4-215ENST00000525334 GJB4Q9NTQ9 266 aa21.02■□□□□ 0.96
TSPAN4-215ENST00000525334 ORC3Q9UBD5 711 aaPredicted RBP21.02■□□□□ 0.96
TSPAN4-215ENST00000525334 ADAM17P78536 824 aa21.01■□□□□ 0.95
TSPAN4-215ENST00000525334 ZNF618Q5T7W0 954 aa21.01■□□□□ 0.95
TSPAN4-215ENST00000525334 FTOQ9C0B1 505 aaKnown RBP eCLIP21.01■□□□□ 0.95
TSPAN4-215ENST00000525334 TTYH1Q9H313 450 aaPredicted RBP21.01■□□□□ 0.95
TSPAN4-215ENST00000525334 AZI2Q9H6S1 392 aa21.01■□□□□ 0.95
TSPAN4-215ENST00000525334 NRCAMQ92823 1304 aa21.01■□□□□ 0.95
TSPAN4-215ENST00000525334 COL6A3P12111 3177 aa21■□□□□ 0.95
TSPAN4-215ENST00000525334 ZBBXA8MT70 800 aa21■□□□□ 0.95
TSPAN4-215ENST00000525334 GRXCR1A8MXD5 290 aa21■□□□□ 0.95
TSPAN4-215ENST00000525334 ATG7O95352 703 aa21■□□□□ 0.95
TSPAN4-215ENST00000525334 FDPSP14324 419 aaKnown RBP21■□□□□ 0.95
TSPAN4-215ENST00000525334 XBP1P17861 261 aa21■□□□□ 0.95
TSPAN4-215ENST00000525334 THPOP40225 353 aa21■□□□□ 0.95
TSPAN4-215ENST00000525334 USP11P51784 963 aa21■□□□□ 0.95
TSPAN4-215ENST00000525334 ST3GAL1Q11201 340 aa21■□□□□ 0.95
TSPAN4-215ENST00000525334 PPFIA1Q13136 1202 aa21■□□□□ 0.95
TSPAN4-215ENST00000525334 NSUN7Q8NE18 718 aaKnown RBP21■□□□□ 0.95
TSPAN4-215ENST00000525334 WASF1Q92558 559 aa21■□□□□ 0.95
TSPAN4-215ENST00000525334 TBC1D22BQ9NU19 505 aa21■□□□□ 0.95
TSPAN4-215ENST00000525334 TET1Q8NFU7 2136 aa20.99■□□□□ 0.95
TSPAN4-215ENST00000525334 NBNO60934 754 aa20.99■□□□□ 0.95
TSPAN4-215ENST00000525334 PARNO95453 639 aaKnown RBP20.99■□□□□ 0.95
TSPAN4-215ENST00000525334 ACTN1P12814 892 aa20.99■□□□□ 0.95
TSPAN4-215ENST00000525334 RBM25P49756 843 aaKnown RBP20.99■□□□□ 0.95
TSPAN4-215ENST00000525334 STAT5BP51692 787 aa20.99■□□□□ 0.95
TSPAN4-215ENST00000525334 GRIK4Q16099 956 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms