RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 GPNMBQ14956 572 aa21.19■□□□□ 0.98
CAPN1-203ENST00000525013 CCDC12Q8WUD4 166 aaPredicted RBP21.19■□□□□ 0.98
CAPN1-203ENST00000525013 SLC9A7Q96T83 725 aa21.19■□□□□ 0.98
CAPN1-203ENST00000525013 SLC26A6Q9BXS9 759 aa21.19■□□□□ 0.98
CAPN1-203ENST00000525013 UPF3BQ9BZI7 483 aaKnown RBP21.19■□□□□ 0.98
CAPN1-203ENST00000525013 NCOA5Q9HCD5 579 aaKnown RBP21.19■□□□□ 0.98
CAPN1-203ENST00000525013 PCDHA11Q9Y5I1 949 aa21.19■□□□□ 0.98
CAPN1-203ENST00000525013 NID2Q14112 1375 aa21.19■□□□□ 0.98
CAPN1-203ENST00000525013 GSTTP1A0A1W2PQM5 241 aa21.18■□□□□ 0.98
CAPN1-203ENST00000525013 BAIAP3O94812 1187 aa21.18■□□□□ 0.98
CAPN1-203ENST00000525013 SREBF1P36956 1147 aa21.18■□□□□ 0.98
CAPN1-203ENST00000525013 KCNJ6P48051 423 aa21.18■□□□□ 0.98
CAPN1-203ENST00000525013 PKN1Q16512 942 aa21.18■□□□□ 0.98
CAPN1-203ENST00000525013 CEP55Q53EZ4 464 aa21.18■□□□□ 0.98
CAPN1-203ENST00000525013 GLG1Q92896 1179 aa21.18■□□□□ 0.98
CAPN1-203ENST00000525013 SDF4Q9BRK5 362 aa21.18■□□□□ 0.98
CAPN1-203ENST00000525013 PRDM12Q9H4Q4 367 aa21.18■□□□□ 0.98
CAPN1-203ENST00000525013 C6orf50Q9HD87 102 aa21.18■□□□□ 0.98
CAPN1-203ENST00000525013 JPH1Q9HDC5 661 aaPredicted RBP21.18■□□□□ 0.98
CAPN1-203ENST00000525013 RSPH10B2B2RC85 870 aa21.17■□□□□ 0.98
CAPN1-203ENST00000525013 CXCL10P02778 98 aa21.17■□□□□ 0.98
CAPN1-203ENST00000525013 RSPH10BP0C881 870 aa21.17■□□□□ 0.98
CAPN1-203ENST00000525013 ARP10275 920 aa21.17■□□□□ 0.98
CAPN1-203ENST00000525013 MARK3P27448 753 aa21.17■□□□□ 0.98
CAPN1-203ENST00000525013 HOXC8P31273 242 aa21.17■□□□□ 0.98
CAPN1-203ENST00000525013 CLK2P49760 499 aaKnown RBP21.17■□□□□ 0.98
CAPN1-203ENST00000525013 EVCP57679 992 aa21.17■□□□□ 0.98
CAPN1-203ENST00000525013 ARHGAP4P98171 946 aa21.17■□□□□ 0.98
CAPN1-203ENST00000525013 TOB2Q14106 344 aaPredicted RBP21.17■□□□□ 0.98
CAPN1-203ENST00000525013 NTRK3Q16288 839 aa21.17■□□□□ 0.98
CAPN1-203ENST00000525013 PPP2R2DQ66LE6 453 aa21.17■□□□□ 0.98
CAPN1-203ENST00000525013 CNKSR3Q6P9H4 555 aa21.17■□□□□ 0.98
CAPN1-203ENST00000525013 PHOSPHO2Q8TCD6 241 aa21.17■□□□□ 0.98
CAPN1-203ENST00000525013 GAS2L1Q99501 681 aaPredicted RBP21.17■□□□□ 0.98
CAPN1-203ENST00000525013 LARP6Q9BRS8 491 aaKnown RBP21.17■□□□□ 0.98
CAPN1-203ENST00000525013 TM6SF1Q9BZW5 370 aa21.17■□□□□ 0.98
CAPN1-203ENST00000525013 ZMYND12Q9H0C1 365 aa21.17■□□□□ 0.98
CAPN1-203ENST00000525013 SLC9A2Q9UBY0 812 aa21.17■□□□□ 0.98
CAPN1-203ENST00000525013 ESYT2A0FGR8 921 aa21.16■□□□□ 0.98
CAPN1-203ENST00000525013 IFNAR1P17181 557 aa21.16■□□□□ 0.98
CAPN1-203ENST00000525013 TRAF7Q6Q0C0 670 aa21.16■□□□□ 0.98
CAPN1-203ENST00000525013 REXO1Q8N1G1 1221 aaKnown RBP21.16■□□□□ 0.98
CAPN1-203ENST00000525013 LMBR1Q8WVP7 490 aa21.16■□□□□ 0.98
CAPN1-203ENST00000525013 RNF26Q9BY78 433 aaPredicted RBP21.16■□□□□ 0.98
CAPN1-203ENST00000525013 SMARCAD1Q9H4L7 1026 aa21.16■□□□□ 0.98
CAPN1-203ENST00000525013 ERAP1Q9NZ08 941 aa21.16■□□□□ 0.98
CAPN1-203ENST00000525013 PRUNE2Q8WUY3 3088 aa21.15■□□□□ 0.98
CAPN1-203ENST00000525013 CHD7Q9P2D1 2997 aa21.15■□□□□ 0.98
CAPN1-203ENST00000525013 EYSQ5T1H1 3165 aa21.15■□□□□ 0.98
CAPN1-203ENST00000525013 EMSYQ7Z589 1322 aa21.15■□□□□ 0.98
CAPN1-203ENST00000525013 NRCAMQ92823 1304 aa21.15■□□□□ 0.98
CAPN1-203ENST00000525013 KIF28PB7ZC32 967 aa21.15■□□□□ 0.98
CAPN1-203ENST00000525013 MEIS1O00470 390 aa21.15■□□□□ 0.98
CAPN1-203ENST00000525013 CTSHP09668 335 aa21.15■□□□□ 0.98
CAPN1-203ENST00000525013 GNA11P29992 359 aa21.15■□□□□ 0.98
CAPN1-203ENST00000525013 MBTPS1Q14703 1052 aa21.15■□□□□ 0.98
CAPN1-203ENST00000525013 HERC6Q8IVU3 1022 aa21.15■□□□□ 0.98
CAPN1-203ENST00000525013 AGO4Q9HCK5 861 aaKnown RBP21.15■□□□□ 0.98
CAPN1-203ENST00000525013 PDRG1Q9NUG6 133 aa21.15■□□□□ 0.98
CAPN1-203ENST00000525013 PTPRSQ13332 1948 aa21.15■□□□□ 0.98
CAPN1-203ENST00000525013 CUL9Q8IWT3 2517 aa21.14■□□□□ 0.98
CAPN1-203ENST00000525013 ABHD14A-ACY1A0A1B0GW23 586 aa21.14■□□□□ 0.97
CAPN1-203ENST00000525013 RBAK-RBAKDNI3L0D1 243 aa21.14■□□□□ 0.97
CAPN1-203ENST00000525013 CPLX1O14810 134 aa21.14■□□□□ 0.97
CAPN1-203ENST00000525013 ADAMTS3O15072 1205 aa21.14■□□□□ 0.97
CAPN1-203ENST00000525013 LGR5O75473 907 aa21.14■□□□□ 0.97
CAPN1-203ENST00000525013 CA3P07451 260 aa21.14■□□□□ 0.97
CAPN1-203ENST00000525013 WDR5P61964 334 aaKnown RBP21.14■□□□□ 0.97
CAPN1-203ENST00000525013 PPFIA1Q13136 1202 aa21.14■□□□□ 0.97
CAPN1-203ENST00000525013 STK3Q13188 491 aa21.14■□□□□ 0.97
CAPN1-203ENST00000525013 IKBKEQ14164 716 aa21.14■□□□□ 0.97
CAPN1-203ENST00000525013 MCTP2Q6DN12 878 aa21.14■□□□□ 0.97
CAPN1-203ENST00000525013 PLA2G4DQ86XP0 818 aa21.14■□□□□ 0.97
CAPN1-203ENST00000525013 TRIM22Q8IYM9 498 aa21.14■□□□□ 0.97
CAPN1-203ENST00000525013 CCDC148Q8NFR7 591 aa21.14■□□□□ 0.97
CAPN1-203ENST00000525013 AZI2Q9H6S1 392 aa21.14■□□□□ 0.97
CAPN1-203ENST00000525013 NFASCO94856 1347 aa21.13■□□□□ 0.97
CAPN1-203ENST00000525013 ACTR2P61160 394 aa21.13■□□□□ 0.97
CAPN1-203ENST00000525013 SSRP1Q08945 709 aaKnown RBP21.13■□□□□ 0.97
CAPN1-203ENST00000525013 ITGB3BPQ13352 177 aaPredicted RBP21.13■□□□□ 0.97
CAPN1-203ENST00000525013 TCTN1Q2MV58 587 aa21.13■□□□□ 0.97
CAPN1-203ENST00000525013 BICD2Q8TD16 824 aa21.13■□□□□ 0.97
CAPN1-203ENST00000525013 ZNF274Q96GC6 653 aaPredicted RBP21.13■□□□□ 0.97
CAPN1-203ENST00000525013 UIMC1Q96RL1 719 aa21.13■□□□□ 0.97
CAPN1-203ENST00000525013 ZBED2Q9BTP6 218 aa21.13■□□□□ 0.97
CAPN1-203ENST00000525013 VPS54Q9P1Q0 977 aa21.13■□□□□ 0.97
CAPN1-203ENST00000525013 UNC80Q8N2C7 3258 aa21.12■□□□□ 0.97
CAPN1-203ENST00000525013 FAM86B1E9PN63 330 aa21.12■□□□□ 0.97
CAPN1-203ENST00000525013 DDX39AO00148 427 aaKnown RBP21.12■□□□□ 0.97
CAPN1-203ENST00000525013 TLL1O43897 1013 aa21.12■□□□□ 0.97
CAPN1-203ENST00000525013 CAND2O75155 1236 aa21.12■□□□□ 0.97
CAPN1-203ENST00000525013 FAM86B2P0C5J1 330 aa21.12■□□□□ 0.97
CAPN1-203ENST00000525013 IGFBP4P22692 258 aa21.12■□□□□ 0.97
CAPN1-203ENST00000525013 ADAM17P78536 824 aa21.12■□□□□ 0.97
CAPN1-203ENST00000525013 DEFB103AP81534 67 aa21.12■□□□□ 0.97
CAPN1-203ENST00000525013 GRIK4Q16099 956 aa21.12■□□□□ 0.97
CAPN1-203ENST00000525013 NIPA1Q7RTP0 329 aa21.12■□□□□ 0.97
CAPN1-203ENST00000525013 TMCO2Q7Z6W1 182 aaPredicted RBP21.12■□□□□ 0.97
CAPN1-203ENST00000525013 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.12■□□□□ 0.97
CAPN1-203ENST00000525013 DBF4BQ8NFT6 615 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms