RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 PARNO95453 639 aaKnown RBP12.75□□□□□ -0.37
TRAPPC4-204ENST00000524797 CXCL10P02778 98 aa12.75□□□□□ -0.37
TRAPPC4-204ENST00000524797 ZNF618Q5T7W0 954 aa12.75□□□□□ -0.37
TRAPPC4-204ENST00000524797 CCDC12Q8WUD4 166 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC4-204ENST00000524797 SEPT1Q8WYJ6 367 aa12.75□□□□□ -0.37
TRAPPC4-204ENST00000524797 ATP6V0A1Q93050 837 aa12.75□□□□□ -0.37
TRAPPC4-204ENST00000524797 ZNF274Q96GC6 653 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC4-204ENST00000524797 NKX2-4Q9H2Z4 354 aa12.75□□□□□ -0.37
TRAPPC4-204ENST00000524797 RNPEPQ9H4A4 650 aa12.75□□□□□ -0.37
TRAPPC4-204ENST00000524797 ZNF576Q9H609 170 aa12.75□□□□□ -0.37
TRAPPC4-204ENST00000524797 C6orf50Q9HD87 102 aa12.75□□□□□ -0.37
TRAPPC4-204ENST00000524797 KCNH7Q9NS40 1196 aa12.75□□□□□ -0.37
TRAPPC4-204ENST00000524797 PDRG1Q9NUG6 133 aa12.75□□□□□ -0.37
TRAPPC4-204ENST00000524797 YBX2Q9Y2T7 364 aaKnown RBP12.75□□□□□ -0.37
TRAPPC4-204ENST00000524797 NFASCO94856 1347 aa12.75□□□□□ -0.37
TRAPPC4-204ENST00000524797 TREHO43280 583 aa12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 NBNO60934 754 aa12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 PPFIA3O75145 1194 aa12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 ARP10275 920 aa12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 RABGGTBP53611 331 aa12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 ARHGAP4P98171 946 aa12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 GRIN2CQ14957 1233 aa12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 CEP55Q53EZ4 464 aa12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 NIPA1Q7RTP0 329 aa12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 LARP6Q9BRS8 491 aaKnown RBP12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 AGO4Q9HCK5 861 aaKnown RBP12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 MYH9P35579 1960 aaKnown RBP12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 MEIS1O00470 390 aa12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 LGR5O75473 907 aa12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 BAIAP3O94812 1187 aa12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 CYP3A4P08684 503 aa12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 ATP2A2P16615 1042 aaKnown RBP12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 MBTPS1Q14703 1052 aa12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 TCTN1Q2MV58 587 aa12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 MCTP2Q6DN12 878 aa12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 CNKSR3Q6P9H4 555 aa12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 CRYGNQ8WXF5 182 aa12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 SLC9A7Q96T83 725 aa12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 JPH1Q9HDC5 661 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 SETD4Q9NVD3 440 aa12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 SLC9A2Q9UBY0 812 aa12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 PCDHA11Q9Y5I1 949 aa12.74□□□□□ -0.37
TRAPPC4-204ENST00000524797 GNAT1P11488 350 aa12.73□□□□□ -0.37
TRAPPC4-204ENST00000524797 GNA11P29992 359 aa12.73□□□□□ -0.37
TRAPPC4-204ENST00000524797 ZNF76P36508 570 aa12.73□□□□□ -0.37
TRAPPC4-204ENST00000524797 THPOP40225 353 aa12.73□□□□□ -0.37
TRAPPC4-204ENST00000524797 ADAM17P78536 824 aa12.73□□□□□ -0.37
TRAPPC4-204ENST00000524797 ITGB3BPQ13352 177 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC4-204ENST00000524797 REXO1Q8N1G1 1221 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-204ENST00000524797 CCDC148Q8NFR7 591 aa12.73□□□□□ -0.37
TRAPPC4-204ENST00000524797 LMBR1Q8WVP7 490 aa12.73□□□□□ -0.37
TRAPPC4-204ENST00000524797 PCYT2Q99447 389 aa12.73□□□□□ -0.37
TRAPPC4-204ENST00000524797 SDF4Q9BRK5 362 aa12.73□□□□□ -0.37
TRAPPC4-204ENST00000524797 SMARCAD1Q9H4L7 1026 aa12.73□□□□□ -0.37
TRAPPC4-204ENST00000524797 VPS54Q9P1Q0 977 aa12.73□□□□□ -0.37
TRAPPC4-204ENST00000524797 LAMA3Q16787 3333 aa12.73□□□□□ -0.37
TRAPPC4-204ENST00000524797 EMSYQ7Z589 1322 aa12.73□□□□□ -0.37
TRAPPC4-204ENST00000524797 LOXHD1Q8IVV2 1947 aa12.73□□□□□ -0.37
TRAPPC4-204ENST00000524797 FOSL2P15408 326 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 SSRP1Q08945 709 aaKnown RBP12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 PLA2G4DQ86XP0 818 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 PHOSPHO2Q8TCD6 241 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 BICD2Q8TD16 824 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 SH3GLB2Q9NR46 395 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 ERAP1Q9NZ08 941 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 IGLV3-22A0A075B6J6 115 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 RSPH10B2B2RC85 870 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 FAM86B1E9PN63 330 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 CAND2O75155 1236 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 FAM86B2P0C5J1 330 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 RSPH10BP0C881 870 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 MYOGP15173 224 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 MARK3P27448 753 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 ANAPC15P60006 121 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 ACTR2P61160 394 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 WDR5P61964 334 aaKnown RBP12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 PPFIA1Q13136 1202 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 STK3Q13188 491 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 TRIM22Q8IYM9 498 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 SLC17A8Q8NDX2 589 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 RASGRP4Q8TDF6 673 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 GLG1Q92896 1179 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 MYO9BQ13459 2157 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 NRCAMQ92823 1304 aa12.72□□□□□ -0.37
TRAPPC4-204ENST00000524797 RBAK-RBAKDNI3L0D1 243 aa12.71□□□□□ -0.37
TRAPPC4-204ENST00000524797 KCNJ6P48051 423 aa12.71□□□□□ -0.37
TRAPPC4-204ENST00000524797 HERC6Q8IVU3 1022 aa12.71□□□□□ -0.37
TRAPPC4-204ENST00000524797 IL17RAQ96F46 866 aa12.71□□□□□ -0.37
TRAPPC4-204ENST00000524797 CPLX1O14810 134 aa12.7□□□□□ -0.38
TRAPPC4-204ENST00000524797 ATG7O95352 703 aa12.7□□□□□ -0.38
TRAPPC4-204ENST00000524797 DEXIO95424 95 aa12.7□□□□□ -0.38
TRAPPC4-204ENST00000524797 GRIK4Q16099 956 aa12.7□□□□□ -0.38
TRAPPC4-204ENST00000524797 FAM26DQ5JW98 314 aa12.7□□□□□ -0.38
TRAPPC4-204ENST00000524797 CPLX2Q6PUV4 134 aaKnown RBP12.7□□□□□ -0.38
TRAPPC4-204ENST00000524797 RUFY4Q6ZNE9 571 aa12.7□□□□□ -0.38
TRAPPC4-204ENST00000524797 MAFAQ8NHW3 353 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC4-204ENST00000524797 PRDM12Q9H4Q4 367 aa12.7□□□□□ -0.38
TRAPPC4-204ENST00000524797 SLC28A3Q9HAS3 691 aa12.7□□□□□ -0.38
TRAPPC4-204ENST00000524797 ABHD14A-ACY1A0A1B0GW23 586 aa12.7□□□□□ -0.38
TRAPPC4-204ENST00000524797 DDX39AO00148 427 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms