RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 ZMYND10O75800 440 aa9.15□□□□□ -0.95
CHD7-202ENST00000524602 APBA3O96018 575 aa9.15□□□□□ -0.95
CHD7-202ENST00000524602 SLC1A4P43007 532 aa9.15□□□□□ -0.95
CHD7-202ENST00000524602 AP3B2Q13367 1082 aa9.15□□□□□ -0.95
CHD7-202ENST00000524602 ECM1Q16610 540 aa9.15□□□□□ -0.95
CHD7-202ENST00000524602 COL23A1Q86Y22 540 aaPredicted RBP9.15□□□□□ -0.95
CHD7-202ENST00000524602 FAM107BQ9H098 131 aa9.15□□□□□ -0.95
CHD7-202ENST00000524602 EHD4Q9H223 541 aa9.15□□□□□ -0.95
CHD7-202ENST00000524602 KCTD10Q9H3F6 313 aa9.15□□□□□ -0.95
CHD7-202ENST00000524602 KCNMB3Q9NPA1 279 aa9.15□□□□□ -0.95
CHD7-202ENST00000524602 BZW2Q9Y6E2 419 aaKnown RBP9.15□□□□□ -0.95
CHD7-202ENST00000524602 TBX3O15119 743 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 HLA-DOAP06340 250 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 PLA2G4BP0C869 781 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 LRRC41Q15345 812 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 UBE2SQ16763 222 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 SND1Q7KZF4 910 aaKnown RBP eCLIP9.14□□□□□ -0.95
CHD7-202ENST00000524602 KCTD17Q8N5Z5 321 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 DRC1Q96MC2 740 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 LSM14BQ9BX40 385 aaKnown RBP9.14□□□□□ -0.95
CHD7-202ENST00000524602 KLRG2A4D1S0 409 aaPredicted RBP9.14□□□□□ -0.95
CHD7-202ENST00000524602 TRIM66O15016 1216 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 ZNF772Q68DY9 489 aaPredicted RBP9.14□□□□□ -0.95
CHD7-202ENST00000524602 EIF1ADQ8N9N8 165 aaKnown RBP9.14□□□□□ -0.95
CHD7-202ENST00000524602 AKT1S1Q96B36 256 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 PLCB1Q9NQ66 1216 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 GDF3Q9NR23 364 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 EMILIN3Q9NT22 766 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 DMGDHQ9UI17 866 aaKnown RBP9.14□□□□□ -0.95
CHD7-202ENST00000524602 SALL4Q9UJQ4 1053 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 NRXN2Q9P2S2 1712 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 PLSCR1O15162 318 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 CETN3O15182 167 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 TLR2O60603 784 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 HSF2BPO75031 334 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 SHMT1P34896 483 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 EPS15P42566 896 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 POLR2FP61218 127 aaKnown RBP9.14□□□□□ -0.95
CHD7-202ENST00000524602 IFI16Q16666 785 aaKnown RBP9.14□□□□□ -0.95
CHD7-202ENST00000524602 FRMD5Q7Z6J6 570 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 GPBP1Q86WP2 473 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 SP8Q8IXZ3 490 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 GSPT2Q8IYD1 628 aaKnown RBP9.14□□□□□ -0.95
CHD7-202ENST00000524602 GLIS3Q8NEA6 775 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 DCAF4Q8WV16 495 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 RUFY1Q96T51 708 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 MXD3Q9BW11 206 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 KIAA1024Q9UPX6 916 aa9.14□□□□□ -0.95
CHD7-202ENST00000524602 CYP11B2P19099 503 aa9.13□□□□□ -0.95
CHD7-202ENST00000524602 PAK2Q13177 524 aa9.13□□□□□ -0.95
CHD7-202ENST00000524602 PICALMQ13492 652 aa9.13□□□□□ -0.95
CHD7-202ENST00000524602 HERC4Q5GLZ8 1057 aaPredicted RBP9.13□□□□□ -0.95
CHD7-202ENST00000524602 MEI1Q5TIA1 1274 aa9.13□□□□□ -0.95
CHD7-202ENST00000524602 HHIPL2Q6UWX4 724 aa9.13□□□□□ -0.95
CHD7-202ENST00000524602 MREGQ8N565 214 aa9.13□□□□□ -0.95
CHD7-202ENST00000524602 ERMNQ8TAM6 284 aa9.13□□□□□ -0.95
CHD7-202ENST00000524602 SCFD1Q8WVM8 642 aa9.13□□□□□ -0.95
CHD7-202ENST00000524602 GANQ9H2C0 597 aa9.13□□□□□ -0.95
CHD7-202ENST00000524602 TRAF3IP3Q9Y228 551 aa9.13□□□□□ -0.95
CHD7-202ENST00000524602 COL11A2P13942 1736 aaPredicted RBP9.13□□□□□ -0.95
CHD7-202ENST00000524602 C6orf229H3BNL8 230 aa9.13□□□□□ -0.95
CHD7-202ENST00000524602 SLC12A3P55017 1021 aa9.13□□□□□ -0.95
CHD7-202ENST00000524602 NAP1L1P55209 391 aaKnown RBP9.13□□□□□ -0.95
CHD7-202ENST00000524602 GTF2IP78347 998 aa9.13□□□□□ -0.95
CHD7-202ENST00000524602 KLHL30Q0D2K2 578 aa9.13□□□□□ -0.95
CHD7-202ENST00000524602 ADAM9Q13443 819 aa9.13□□□□□ -0.95
CHD7-202ENST00000524602 ASIC2Q16515 512 aa9.13□□□□□ -0.95
CHD7-202ENST00000524602 C1orf131Q8NDD1 294 aaKnown RBP9.13□□□□□ -0.95
CHD7-202ENST00000524602 HDAC7Q8WUI4 952 aa9.13□□□□□ -0.95
CHD7-202ENST00000524602 NLRC4Q9NPP4 1024 aa9.13□□□□□ -0.95
CHD7-202ENST00000524602 RBM12Q9NTZ6 932 aaKnown RBP9.13□□□□□ -0.95
CHD7-202ENST00000524602 FBXL5Q9UKA1 691 aa9.13□□□□□ -0.95
CHD7-202ENST00000524602 PPEF1O14829 653 aaPredicted RBP9.12□□□□□ -0.95
CHD7-202ENST00000524602 EZH2Q15910 746 aaKnown RBP9.12□□□□□ -0.95
CHD7-202ENST00000524602 DNAJC21Q5F1R6 531 aaKnown RBP9.12□□□□□ -0.95
CHD7-202ENST00000524602 MKL1Q969V6 931 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 DDX4Q9NQI0 724 aaKnown RBP9.12□□□□□ -0.95
CHD7-202ENST00000524602 USP17L10C9JJH3 530 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 E9PMD0 336 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 BUB1O43683 1085 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 PALMO75781 387 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 SSBP05455 408 aaKnown RBP eCLIP9.12□□□□□ -0.95
CHD7-202ENST00000524602 CXCR5P32302 372 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 GTF2A1P52655 376 aaPredicted RBP9.12□□□□□ -0.95
CHD7-202ENST00000524602 EIF6P56537 245 aaKnown RBP9.12□□□□□ -0.95
CHD7-202ENST00000524602 SKOR1P84550 965 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 Q4G0T1 1027 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 NLGN1Q8N2Q7 840 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 WHAMMQ8TF30 809 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 RIN2Q8WYP3 895 aaPredicted RBP9.12□□□□□ -0.95
CHD7-202ENST00000524602 TBC1D5Q92609 795 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 GDAP1L1Q96MZ0 367 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 ANO3Q9BYT9 981 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 DHX36Q9H2U1 1008 aaKnown RBP9.12□□□□□ -0.95
CHD7-202ENST00000524602 USP40Q9NVE5 1235 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 TNS1Q9HBL0 1735 aaKnown RBP9.12□□□□□ -0.95
CHD7-202ENST00000524602 NCK2O43639 380 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 CALUO43852 315 aaPredicted RBP9.12□□□□□ -0.95
CHD7-202ENST00000524602 KRT18P05783 430 aaKnown RBP9.12□□□□□ -0.95
CHD7-202ENST00000524602 MAGEA9P43362 315 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms