RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 KIAA0753Q2KHM9 967 aa17.12■□□□□ 0.33
SF3B2-202ENST00000524475 LETM2Q2VYF4 491 aa17.12■□□□□ 0.33
SF3B2-202ENST00000524475 SMAP1Q8IYB5 467 aaPredicted RBP17.12■□□□□ 0.33
SF3B2-202ENST00000524475 ETNPPLQ8TBG4 499 aa17.12■□□□□ 0.33
SF3B2-202ENST00000524475 TUT1Q9H6E5 874 aaKnown RBP17.12■□□□□ 0.33
SF3B2-202ENST00000524475 PKD2L1Q9P0L9 805 aa17.12■□□□□ 0.33
SF3B2-202ENST00000524475 PRKAG2Q9UGJ0 569 aa17.12■□□□□ 0.33
SF3B2-202ENST00000524475 DDX25Q9UHL0 483 aaKnown RBP17.12■□□□□ 0.33
SF3B2-202ENST00000524475 SMC3Q9UQE7 1217 aa17.12■□□□□ 0.33
SF3B2-202ENST00000524475 IGKV6D-21A0A0A0MT36 114 aa17.11■□□□□ 0.33
SF3B2-202ENST00000524475 TBX3O15119 743 aa17.11■□□□□ 0.33
SF3B2-202ENST00000524475 CCNE2O96020 404 aa17.11■□□□□ 0.33
SF3B2-202ENST00000524475 U2AF2P26368 475 aaKnown RBP eCLIP17.11■□□□□ 0.33
SF3B2-202ENST00000524475 ORC2Q13416 577 aaPredicted RBP17.11■□□□□ 0.33
SF3B2-202ENST00000524475 FAM20AQ96MK3 541 aa17.11■□□□□ 0.33
SF3B2-202ENST00000524475 SMARCAD1Q9H4L7 1026 aa17.11■□□□□ 0.33
SF3B2-202ENST00000524475 KCNMB3Q9NPA1 279 aa17.11■□□□□ 0.33
SF3B2-202ENST00000524475 GTF2IRD1Q9UHL9 959 aa17.11■□□□□ 0.33
SF3B2-202ENST00000524475 TELO2Q9Y4R8 837 aa17.11■□□□□ 0.33
SF3B2-202ENST00000524475 TRIM43BA6NCK2 446 aa17.1■□□□□ 0.33
SF3B2-202ENST00000524475 B4GALT4O60513 344 aa17.1■□□□□ 0.33
SF3B2-202ENST00000524475 PSMD10O75832 226 aa17.1■□□□□ 0.33
SF3B2-202ENST00000524475 TRAPPC10P48553 1259 aa17.1■□□□□ 0.33
SF3B2-202ENST00000524475 SLC26A2P50443 739 aa17.1■□□□□ 0.33
SF3B2-202ENST00000524475 FOSBP53539 338 aa17.1■□□□□ 0.33
SF3B2-202ENST00000524475 GUCY1B3Q02153 619 aa17.1■□□□□ 0.33
SF3B2-202ENST00000524475 SP4Q02446 784 aa17.1■□□□□ 0.33
SF3B2-202ENST00000524475 B3GNT9Q6UX72 402 aa17.1■□□□□ 0.33
SF3B2-202ENST00000524475 ABHD15Q6UXT9 468 aa17.1■□□□□ 0.33
SF3B2-202ENST00000524475 PLPPR4Q7Z2D5 763 aa17.1■□□□□ 0.33
SF3B2-202ENST00000524475 C7orf31Q8N865 590 aa17.1■□□□□ 0.33
SF3B2-202ENST00000524475 RDM1Q8NG50 284 aa17.1■□□□□ 0.33
SF3B2-202ENST00000524475 AFAP1L1Q8TED9 768 aa17.1■□□□□ 0.33
SF3B2-202ENST00000524475 TRIM43Q96BQ3 446 aaPredicted RBP17.1■□□□□ 0.33
SF3B2-202ENST00000524475 TMEM39AQ9NV64 488 aa17.1■□□□□ 0.33
SF3B2-202ENST00000524475 ERAP1Q9NZ08 941 aa17.1■□□□□ 0.33
SF3B2-202ENST00000524475 TCEAL9Q9UHQ7 104 aa17.1■□□□□ 0.33
SF3B2-202ENST00000524475 ZMYND8Q9ULU4 1186 aaPredicted RBP17.1■□□□□ 0.33
SF3B2-202ENST00000524475 WDR81Q562E7 1941 aa17.09■□□□□ 0.33
SF3B2-202ENST00000524475 FAM205CA6NFA0 338 aa17.09■□□□□ 0.33
SF3B2-202ENST00000524475 WDR64B1ANS9 1081 aa17.09■□□□□ 0.33
SF3B2-202ENST00000524475 SLC37A4O43826 429 aa17.09■□□□□ 0.33
SF3B2-202ENST00000524475 CCNT1O60563 726 aaKnown RBP17.09■□□□□ 0.33
SF3B2-202ENST00000524475 GAS7O60861 476 aa17.09■□□□□ 0.33
SF3B2-202ENST00000524475 SFNP31947 248 aa17.09■□□□□ 0.33
SF3B2-202ENST00000524475 LRCH2Q5VUJ6 765 aa17.09■□□□□ 0.33
SF3B2-202ENST00000524475 SH3RF1Q7Z6J0 888 aa17.09■□□□□ 0.33
SF3B2-202ENST00000524475 NOSTRINQ8IVI9 506 aa17.09■□□□□ 0.33
SF3B2-202ENST00000524475 PCYT2Q99447 389 aa17.09■□□□□ 0.33
SF3B2-202ENST00000524475 GDF15Q99988 308 aa17.09■□□□□ 0.33
SF3B2-202ENST00000524475 TEKT3Q9BXF9 490 aa17.09■□□□□ 0.33
SF3B2-202ENST00000524475 PRO3102Q9H379 93 aa17.09■□□□□ 0.33
SF3B2-202ENST00000524475 HDAC6Q9UBN7 1215 aa17.09■□□□□ 0.33
SF3B2-202ENST00000524475 KAT6AQ92794 2004 aa17.08■□□□□ 0.33
SF3B2-202ENST00000524475 MYH9P35579 1960 aaKnown RBP17.08■□□□□ 0.33
SF3B2-202ENST00000524475 TIMP1P01033 207 aa17.08■□□□□ 0.32
SF3B2-202ENST00000524475 BMP8BP34820 402 aa17.08■□□□□ 0.32
SF3B2-202ENST00000524475 JAK3P52333 1124 aa17.08■□□□□ 0.32
SF3B2-202ENST00000524475 RBL2Q08999 1139 aa17.08■□□□□ 0.32
SF3B2-202ENST00000524475 FAM47CQ5HY64 1035 aa17.08■□□□□ 0.32
SF3B2-202ENST00000524475 UTP14CQ5TAP6 766 aaKnown RBP17.08■□□□□ 0.32
SF3B2-202ENST00000524475 GDF6Q6KF10 455 aaPredicted RBP17.08■□□□□ 0.32
SF3B2-202ENST00000524475 MIS18BP1Q6P0N0 1132 aa17.08■□□□□ 0.32
SF3B2-202ENST00000524475 TRIM50Q86XT4 487 aa17.08■□□□□ 0.32
SF3B2-202ENST00000524475 TNPO1Q92973 898 aaKnown RBP17.08■□□□□ 0.32
SF3B2-202ENST00000524475 CTAGE1Q96RT6 745 aa17.08■□□□□ 0.32
SF3B2-202ENST00000524475 TRPV6Q9H1D0 765 aa17.08■□□□□ 0.32
SF3B2-202ENST00000524475 AZI2Q9H6S1 392 aa17.08■□□□□ 0.32
SF3B2-202ENST00000524475 PRDM5Q9NQX1 630 aaPredicted RBP17.08■□□□□ 0.32
SF3B2-202ENST00000524475 TRMT13Q9NUP7 481 aaKnown RBP17.08■□□□□ 0.32
SF3B2-202ENST00000524475 PCDHA10Q9Y5I2 948 aa17.08■□□□□ 0.32
SF3B2-202ENST00000524475 NRCAMQ92823 1304 aa17.07■□□□□ 0.32
SF3B2-202ENST00000524475 GNAT1P11488 350 aa17.07■□□□□ 0.32
SF3B2-202ENST00000524475 SYN1P17600 705 aa17.07■□□□□ 0.32
SF3B2-202ENST00000524475 PDCP20941 246 aa17.07■□□□□ 0.32
SF3B2-202ENST00000524475 STAT5BP51692 787 aa17.07■□□□□ 0.32
SF3B2-202ENST00000524475 PPP2R5CQ13362 524 aa17.07■□□□□ 0.32
SF3B2-202ENST00000524475 FAM160B1Q5W0V3 765 aa17.07■□□□□ 0.32
SF3B2-202ENST00000524475 HSCBQ8IWL3 235 aa17.07■□□□□ 0.32
SF3B2-202ENST00000524475 SLFN12Q8IYM2 578 aa17.07■□□□□ 0.32
SF3B2-202ENST00000524475 CAGE1Q8TC20 777 aa17.07■□□□□ 0.32
SF3B2-202ENST00000524475 GLG1Q92896 1179 aa17.07■□□□□ 0.32
SF3B2-202ENST00000524475 NOC4LQ9BVI4 516 aaKnown RBP17.07■□□□□ 0.32
SF3B2-202ENST00000524475 TRIP12Q14669 1992 aaPredicted RBP17.06■□□□□ 0.32
SF3B2-202ENST00000524475 IGSF9BQ9UPX0 1349 aa17.06■□□□□ 0.32
SF3B2-202ENST00000524475 A0A1W2PPC1 479 aa17.06■□□□□ 0.32
SF3B2-202ENST00000524475 C17orf102A2RUQ5 167 aa17.06■□□□□ 0.32
SF3B2-202ENST00000524475 KIF28PB7ZC32 967 aa17.06■□□□□ 0.32
SF3B2-202ENST00000524475 H3BQV1 296 aa17.06■□□□□ 0.32
SF3B2-202ENST00000524475 DDX39AO00148 427 aaKnown RBP17.06■□□□□ 0.32
SF3B2-202ENST00000524475 PITPNM1O00562 1244 aa17.06■□□□□ 0.32
SF3B2-202ENST00000524475 PSAPP07602 524 aa17.06■□□□□ 0.32
SF3B2-202ENST00000524475 SMIM10L2AP0DMW4 78 aa17.06■□□□□ 0.32
SF3B2-202ENST00000524475 SMIM10L2BP0DMW5 78 aa17.06■□□□□ 0.32
SF3B2-202ENST00000524475 RAG1P15918 1043 aa17.06■□□□□ 0.32
SF3B2-202ENST00000524475 MAGEA10P43363 369 aaPredicted RBP17.06■□□□□ 0.32
SF3B2-202ENST00000524475 ADAM17P78536 824 aa17.06■□□□□ 0.32
SF3B2-202ENST00000524475 PTK7Q13308 1070 aa17.06■□□□□ 0.32
SF3B2-202ENST00000524475 GNL2Q13823 731 aaKnown RBP17.06■□□□□ 0.32
SF3B2-202ENST00000524475 PTGISQ16647 500 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms