RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 TCEANC2Q96MN5 208 aa21.58■■□□□ 1.05
PTP4A3-206ENST00000524028 NECAB3Q96P71 396 aaPredicted RBP21.58■■□□□ 1.05
PTP4A3-206ENST00000524028 TGS1Q96RS0 853 aaKnown RBP21.58■■□□□ 1.05
PTP4A3-206ENST00000524028 ZNF215Q9UL58 517 aaPredicted RBP21.58■■□□□ 1.05
PTP4A3-206ENST00000524028 PCDHA6Q9UN73 950 aa21.58■■□□□ 1.05
PTP4A3-206ENST00000524028 PCDHA8Q9Y5H6 950 aa21.58■■□□□ 1.05
PTP4A3-206ENST00000524028 CAND2O75155 1236 aa21.57■■□□□ 1.04
PTP4A3-206ENST00000524028 AMHP03971 560 aa21.57■■□□□ 1.04
PTP4A3-206ENST00000524028 GNAT1P11488 350 aa21.57■■□□□ 1.04
PTP4A3-206ENST00000524028 EXOSC10Q01780 885 aaKnown RBP21.57■■□□□ 1.04
PTP4A3-206ENST00000524028 HEATR3Q7Z4Q2 680 aa21.57■■□□□ 1.04
PTP4A3-206ENST00000524028 MYOCDQ8IZQ8 938 aa21.57■■□□□ 1.04
PTP4A3-206ENST00000524028 IL27Q8NEV9 243 aa21.57■■□□□ 1.04
PTP4A3-206ENST00000524028 PKD2L1Q9P0L9 805 aa21.57■■□□□ 1.04
PTP4A3-206ENST00000524028 BRPF3Q9ULD4 1205 aa21.57■■□□□ 1.04
PTP4A3-206ENST00000524028 DOCK5Q9H7D0 1870 aa21.57■■□□□ 1.04
PTP4A3-206ENST00000524028 HTRA4P83105 476 aaPredicted RBP21.56■■□□□ 1.04
PTP4A3-206ENST00000524028 ADCK5Q3MIX3 580 aa21.56■■□□□ 1.04
PTP4A3-206ENST00000524028 FAM26DQ5JW98 314 aa21.56■■□□□ 1.04
PTP4A3-206ENST00000524028 WWC2Q6AWC2 1192 aa21.56■■□□□ 1.04
PTP4A3-206ENST00000524028 TYW1BQ6NUM6 668 aa21.56■■□□□ 1.04
PTP4A3-206ENST00000524028 APOA5Q6Q788 366 aa21.56■■□□□ 1.04
PTP4A3-206ENST00000524028 RUFY4Q6ZNE9 571 aa21.56■■□□□ 1.04
PTP4A3-206ENST00000524028 RASEFQ8IZ41 740 aa21.56■■□□□ 1.04
PTP4A3-206ENST00000524028 SEPT8Q92599 483 aa21.56■■□□□ 1.04
PTP4A3-206ENST00000524028 CDHR1Q96JP9 859 aa21.56■■□□□ 1.04
PTP4A3-206ENST00000524028 NEK1Q96PY6 1258 aa21.56■■□□□ 1.04
PTP4A3-206ENST00000524028 C17orf80Q9BSJ5 609 aa21.56■■□□□ 1.04
PTP4A3-206ENST00000524028 INSL6Q9Y581 213 aa21.56■■□□□ 1.04
PTP4A3-206ENST00000524028 CNTNAP5Q8WYK1 1306 aa21.55■■□□□ 1.04
PTP4A3-206ENST00000524028 NRCAMQ92823 1304 aa21.55■■□□□ 1.04
PTP4A3-206ENST00000524028 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.55■■□□□ 1.04
PTP4A3-206ENST00000524028 SPDYE3A6NKU9 549 aa21.55■■□□□ 1.04
PTP4A3-206ENST00000524028 FUT2Q10981 343 aa21.55■■□□□ 1.04
PTP4A3-206ENST00000524028 MTMR1Q13613 665 aa21.55■■□□□ 1.04
PTP4A3-206ENST00000524028 AAK1Q2M2I8 961 aa21.55■■□□□ 1.04
PTP4A3-206ENST00000524028 SP7Q8TDD2 431 aaPredicted RBP21.55■■□□□ 1.04
PTP4A3-206ENST00000524028 SEPT1Q8WYJ6 367 aa21.55■■□□□ 1.04
PTP4A3-206ENST00000524028 JADE2Q9NQC1 790 aa21.55■■□□□ 1.04
PTP4A3-206ENST00000524028 LMCD1Q9NZU5 365 aa21.55■■□□□ 1.04
PTP4A3-206ENST00000524028 COG5Q9UP83 839 aa21.55■■□□□ 1.04
PTP4A3-206ENST00000524028 COL4A4P53420 1690 aaPredicted RBP21.54■■□□□ 1.04
PTP4A3-206ENST00000524028 CHRNA1P02708 482 aa21.54■■□□□ 1.04
PTP4A3-206ENST00000524028 MARK3P27448 753 aa21.54■■□□□ 1.04
PTP4A3-206ENST00000524028 RNF20Q5VTR2 975 aa21.54■■□□□ 1.04
PTP4A3-206ENST00000524028 SYNE3Q6ZMZ3 975 aa21.54■■□□□ 1.04
PTP4A3-206ENST00000524028 CENPQQ7L2Z9 268 aaPredicted RBP21.54■■□□□ 1.04
PTP4A3-206ENST00000524028 TOP1MTQ969P6 601 aa21.54■■□□□ 1.04
PTP4A3-206ENST00000524028 BDP1A6H8Y1 2624 aa21.53■■□□□ 1.04
PTP4A3-206ENST00000524028 TSGA10IPQ3SY00 556 aa21.53■■□□□ 1.04
PTP4A3-206ENST00000524028 MARCH8Q5T0T0 291 aa21.53■■□□□ 1.04
PTP4A3-206ENST00000524028 DHX32Q7L7V1 743 aaKnown RBP21.53■■□□□ 1.04
PTP4A3-206ENST00000524028 CYP2W1Q8TAV3 490 aa21.53■■□□□ 1.04
PTP4A3-206ENST00000524028 HLA-CQ95604 372 aa21.53■■□□□ 1.04
PTP4A3-206ENST00000524028 PGBD1Q96JS3 809 aa21.53■■□□□ 1.04
PTP4A3-206ENST00000524028 PCYT2Q99447 389 aa21.53■■□□□ 1.04
PTP4A3-206ENST00000524028 RBM28Q9NW13 759 aaKnown RBP21.53■■□□□ 1.04
PTP4A3-206ENST00000524028 MAFGO15525 162 aa21.52■■□□□ 1.04
PTP4A3-206ENST00000524028 UPP2O95045 317 aa21.52■■□□□ 1.04
PTP4A3-206ENST00000524028 PPFIA1Q13136 1202 aa21.52■■□□□ 1.04
PTP4A3-206ENST00000524028 GRIK4Q16099 956 aa21.52■■□□□ 1.04
PTP4A3-206ENST00000524028 RPAINQ86UA6 219 aa21.52■■□□□ 1.04
PTP4A3-206ENST00000524028 ZBTB10Q96DT7 871 aa21.52■■□□□ 1.04
PTP4A3-206ENST00000524028 MXRA8Q9BRK3 442 aa21.52■■□□□ 1.04
PTP4A3-206ENST00000524028 RIC8AQ9NPQ8 531 aa21.52■■□□□ 1.04
PTP4A3-206ENST00000524028 KCNH7Q9NS40 1196 aa21.52■■□□□ 1.04
PTP4A3-206ENST00000524028 FAM217BQ9NTX9 383 aaPredicted RBP21.52■■□□□ 1.04
PTP4A3-206ENST00000524028 ERAP1Q9NZ08 941 aa21.52■■□□□ 1.04
PTP4A3-206ENST00000524028 V9GY48 417 aaPredicted RBP21.52■■□□□ 1.04
PTP4A3-206ENST00000524028 MBLAC1A4D2B0 266 aaPredicted RBP21.51■■□□□ 1.03
PTP4A3-206ENST00000524028 ZBTB43O43298 467 aa21.51■■□□□ 1.03
PTP4A3-206ENST00000524028 NAPAP54920 295 aa21.51■■□□□ 1.03
PTP4A3-206ENST00000524028 MGAT3Q09327 533 aa21.51■■□□□ 1.03
PTP4A3-206ENST00000524028 RTN1Q16799 776 aa21.51■■□□□ 1.03
PTP4A3-206ENST00000524028 FBXO22Q8NEZ5 403 aa21.51■■□□□ 1.03
PTP4A3-206ENST00000524028 GLG1Q92896 1179 aa21.51■■□□□ 1.03
PTP4A3-206ENST00000524028 IFIH1Q9BYX4 1025 aaKnown RBP21.51■■□□□ 1.03
PTP4A3-206ENST00000524028 SMARCAD1Q9H4L7 1026 aa21.51■■□□□ 1.03
PTP4A3-206ENST00000524028 EHMT1Q9H9B1 1298 aa21.51■■□□□ 1.03
PTP4A3-206ENST00000524028 MICAL3Q7RTP6 2002 aa21.5■■□□□ 1.03
PTP4A3-206ENST00000524028 STXBP3O00186 592 aa21.5■■□□□ 1.03
PTP4A3-206ENST00000524028 GHRP10912 638 aa21.5■■□□□ 1.03
PTP4A3-206ENST00000524028 CDC27P30260 824 aa21.5■■□□□ 1.03
PTP4A3-206ENST00000524028 TAF2Q6P1X5 1199 aa21.5■■□□□ 1.03
PTP4A3-206ENST00000524028 APBB2Q92870 758 aa21.5■■□□□ 1.03
PTP4A3-206ENST00000524028 YME1L1Q96TA2 773 aa21.5■■□□□ 1.03
PTP4A3-206ENST00000524028 JPH1Q9HDC5 661 aaPredicted RBP21.5■■□□□ 1.03
PTP4A3-206ENST00000524028 TMEM260Q9NX78 707 aa21.5■■□□□ 1.03
PTP4A3-206ENST00000524028 TUBE1Q9UJT0 475 aa21.5■■□□□ 1.03
PTP4A3-206ENST00000524028 ARP10275 920 aa21.49■■□□□ 1.03
PTP4A3-206ENST00000524028 LPIN1Q14693 890 aa21.49■■□□□ 1.03
PTP4A3-206ENST00000524028 EPC2Q52LR7 807 aa21.49■■□□□ 1.03
PTP4A3-206ENST00000524028 PPP1R18Q6NYC8 613 aa21.49■■□□□ 1.03
PTP4A3-206ENST00000524028 DNAJB3Q8WWF6 145 aa21.49■■□□□ 1.03
PTP4A3-206ENST00000524028 SLC9A2Q9UBY0 812 aa21.49■■□□□ 1.03
PTP4A3-206ENST00000524028 TCF20Q9UGU0 1960 aaKnown RBP21.48■■□□□ 1.03
PTP4A3-206ENST00000524028 KLF18A0A0U1RQI7 1052 aa21.48■■□□□ 1.03
PTP4A3-206ENST00000524028 SMCO2A6NFE2 343 aa21.48■■□□□ 1.03
PTP4A3-206ENST00000524028 GOLGA8AA7E2F4 631 aa21.48■■□□□ 1.03
PTP4A3-206ENST00000524028 GOLGA8BA8MQT2 603 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms