RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 ERAP1Q9NZ08 941 aa14.23□□□□□ -0.13
VEGFA-225ENST00000523950 GTF2IRD1Q9UHL9 959 aa14.23□□□□□ -0.13
VEGFA-225ENST00000523950 TRIM43BA6NCK2 446 aa14.22□□□□□ -0.13
VEGFA-225ENST00000523950 BTBD18B2RXH4 712 aa14.22□□□□□ -0.13
VEGFA-225ENST00000523950 MSH4O15457 936 aa14.22□□□□□ -0.13
VEGFA-225ENST00000523950 DHX15O43143 795 aaKnown RBP14.22□□□□□ -0.13
VEGFA-225ENST00000523950 ATG7O95352 703 aa14.22□□□□□ -0.13
VEGFA-225ENST00000523950 TDP2O95551 362 aa14.22□□□□□ -0.13
VEGFA-225ENST00000523950 TIMP1P01033 207 aa14.22□□□□□ -0.13
VEGFA-225ENST00000523950 SLC26A2P50443 739 aa14.22□□□□□ -0.13
VEGFA-225ENST00000523950 ACTR2P61160 394 aa14.22□□□□□ -0.13
VEGFA-225ENST00000523950 NR5A1Q13285 461 aa14.22□□□□□ -0.13
VEGFA-225ENST00000523950 CUL4AQ13619 759 aa14.22□□□□□ -0.13
VEGFA-225ENST00000523950 LETM2Q2VYF4 491 aa14.22□□□□□ -0.13
VEGFA-225ENST00000523950 SH3RF1Q7Z6J0 888 aa14.22□□□□□ -0.13
VEGFA-225ENST00000523950 SLC5A5Q92911 643 aa14.22□□□□□ -0.13
VEGFA-225ENST00000523950 TNPO1Q92973 898 aaKnown RBP14.22□□□□□ -0.13
VEGFA-225ENST00000523950 TRIM43Q96BQ3 446 aaPredicted RBP14.22□□□□□ -0.13
VEGFA-225ENST00000523950 GDF15Q99988 308 aa14.22□□□□□ -0.13
VEGFA-225ENST00000523950 FOXP1Q9H334 677 aaPredicted RBP14.22□□□□□ -0.13
VEGFA-225ENST00000523950 DDX25Q9UHL0 483 aaKnown RBP14.22□□□□□ -0.13
VEGFA-225ENST00000523950 A0A1W2PPC1 479 aa14.21□□□□□ -0.13
VEGFA-225ENST00000523950 TBX3O15119 743 aa14.21□□□□□ -0.13
VEGFA-225ENST00000523950 GNAT1P11488 350 aa14.21□□□□□ -0.13
VEGFA-225ENST00000523950 HOXC8P31273 242 aa14.21□□□□□ -0.13
VEGFA-225ENST00000523950 MAGEA10P43363 369 aaPredicted RBP14.21□□□□□ -0.13
VEGFA-225ENST00000523950 UTP14CQ5TAP6 766 aaKnown RBP14.21□□□□□ -0.13
VEGFA-225ENST00000523950 MIS18BP1Q6P0N0 1132 aa14.21□□□□□ -0.13
VEGFA-225ENST00000523950 PLPPR4Q7Z2D5 763 aa14.21□□□□□ -0.13
VEGFA-225ENST00000523950 CCDC155Q8N6L0 562 aa14.21□□□□□ -0.13
VEGFA-225ENST00000523950 SNX21Q969T3 373 aa14.21□□□□□ -0.13
VEGFA-225ENST00000523950 FAM20AQ96MK3 541 aa14.21□□□□□ -0.13
VEGFA-225ENST00000523950 TEKT3Q9BXF9 490 aa14.21□□□□□ -0.13
VEGFA-225ENST00000523950 TRPV6Q9H1D0 765 aa14.21□□□□□ -0.13
VEGFA-225ENST00000523950 PRO3102Q9H379 93 aa14.21□□□□□ -0.13
VEGFA-225ENST00000523950 AZI2Q9H6S1 392 aa14.21□□□□□ -0.13
VEGFA-225ENST00000523950 HDAC6Q9UBN7 1215 aa14.21□□□□□ -0.13
VEGFA-225ENST00000523950 SMC3Q9UQE7 1217 aa14.21□□□□□ -0.13
VEGFA-225ENST00000523950 NOD1Q9Y239 953 aa14.21□□□□□ -0.13
VEGFA-225ENST00000523950 TANC1Q9C0D5 1861 aa14.21□□□□□ -0.14
VEGFA-225ENST00000523950 KAT6AQ92794 2004 aa14.2□□□□□ -0.14
VEGFA-225ENST00000523950 IGKV6D-21A0A0A0MT36 114 aa14.2□□□□□ -0.14
VEGFA-225ENST00000523950 WDR64B1ANS9 1081 aa14.2□□□□□ -0.14
VEGFA-225ENST00000523950 CCNT1O60563 726 aaKnown RBP14.2□□□□□ -0.14
VEGFA-225ENST00000523950 GAS7O60861 476 aa14.2□□□□□ -0.14
VEGFA-225ENST00000523950 CCNE2O96020 404 aa14.2□□□□□ -0.14
VEGFA-225ENST00000523950 GJB2P29033 226 aa14.2□□□□□ -0.14
VEGFA-225ENST00000523950 SFNP31947 248 aa14.2□□□□□ -0.14
VEGFA-225ENST00000523950 FOSBP53539 338 aa14.2□□□□□ -0.14
VEGFA-225ENST00000523950 CHMP4BP1P59074 171 aa14.2□□□□□ -0.14
VEGFA-225ENST00000523950 GUCY1B3Q02153 619 aa14.2□□□□□ -0.14
VEGFA-225ENST00000523950 ORC2Q13416 577 aaPredicted RBP14.2□□□□□ -0.14
VEGFA-225ENST00000523950 PTGISQ16647 500 aa14.2□□□□□ -0.14
VEGFA-225ENST00000523950 LRCH2Q5VUJ6 765 aa14.2□□□□□ -0.14
VEGFA-225ENST00000523950 FAM160B1Q5W0V3 765 aa14.2□□□□□ -0.14
VEGFA-225ENST00000523950 GDF6Q6KF10 455 aaPredicted RBP14.2□□□□□ -0.14
VEGFA-225ENST00000523950 MFSD5Q6N075 450 aa14.2□□□□□ -0.14
VEGFA-225ENST00000523950 ABHD15Q6UXT9 468 aa14.2□□□□□ -0.14
VEGFA-225ENST00000523950 RDM1Q8NG50 284 aa14.2□□□□□ -0.14
VEGFA-225ENST00000523950 ETNPPLQ8TBG4 499 aa14.2□□□□□ -0.14
VEGFA-225ENST00000523950 CAGE1Q8TC20 777 aa14.2□□□□□ -0.14
VEGFA-225ENST00000523950 AFAP1L1Q8TED9 768 aa14.2□□□□□ -0.14
VEGFA-225ENST00000523950 GLG1Q92896 1179 aa14.2□□□□□ -0.14
VEGFA-225ENST00000523950 HIPK3Q9H422 1215 aa14.2□□□□□ -0.14
VEGFA-225ENST00000523950 TRMT13Q9NUP7 481 aaKnown RBP14.2□□□□□ -0.14
VEGFA-225ENST00000523950 MYH9P35579 1960 aaKnown RBP14.2□□□□□ -0.14
VEGFA-225ENST00000523950 WDR81Q562E7 1941 aa14.19□□□□□ -0.14
VEGFA-225ENST00000523950 NRCAMQ92823 1304 aa14.19□□□□□ -0.14
VEGFA-225ENST00000523950 C17orf102A2RUQ5 167 aa14.19□□□□□ -0.14
VEGFA-225ENST00000523950 K7ELQ4 463 aaPredicted RBP14.19□□□□□ -0.14
VEGFA-225ENST00000523950 DDX39AO00148 427 aaKnown RBP14.19□□□□□ -0.14
VEGFA-225ENST00000523950 PITPNM1O00562 1244 aa14.19□□□□□ -0.14
VEGFA-225ENST00000523950 PSMD10O75832 226 aa14.19□□□□□ -0.14
VEGFA-225ENST00000523950 PSAPP07602 524 aa14.19□□□□□ -0.14
VEGFA-225ENST00000523950 SMIM10L2AP0DMW4 78 aa14.19□□□□□ -0.14
VEGFA-225ENST00000523950 SMIM10L2BP0DMW5 78 aa14.19□□□□□ -0.14
VEGFA-225ENST00000523950 TRAPPC10P48553 1259 aa14.19□□□□□ -0.14
VEGFA-225ENST00000523950 STAT5BP51692 787 aa14.19□□□□□ -0.14
VEGFA-225ENST00000523950 JAK3P52333 1124 aa14.19□□□□□ -0.14
VEGFA-225ENST00000523950 RBL2Q08999 1139 aa14.19□□□□□ -0.14
VEGFA-225ENST00000523950 PTK7Q13308 1070 aa14.19□□□□□ -0.14
VEGFA-225ENST00000523950 BFSP2Q13515 415 aa14.19□□□□□ -0.14
VEGFA-225ENST00000523950 GNL2Q13823 731 aaKnown RBP14.19□□□□□ -0.14
VEGFA-225ENST00000523950 EARS2Q5JPH6 523 aaKnown RBP14.19□□□□□ -0.14
VEGFA-225ENST00000523950 CHRDL2Q6WN34 429 aa14.19□□□□□ -0.14
VEGFA-225ENST00000523950 TRIM50Q86XT4 487 aa14.19□□□□□ -0.14
VEGFA-225ENST00000523950 TMEM199Q8N511 208 aa14.19□□□□□ -0.14
VEGFA-225ENST00000523950 BADQ92934 168 aa14.19□□□□□ -0.14
VEGFA-225ENST00000523950 INTS4Q96HW7 963 aaKnown RBP14.19□□□□□ -0.14
VEGFA-225ENST00000523950 NOC4LQ9BVI4 516 aaKnown RBP14.19□□□□□ -0.14
VEGFA-225ENST00000523950 KCNMB3Q9NPA1 279 aa14.19□□□□□ -0.14
VEGFA-225ENST00000523950 RBM19Q9Y4C8 960 aaKnown RBP14.19□□□□□ -0.14
VEGFA-225ENST00000523950 TELO2Q9Y4R8 837 aa14.19□□□□□ -0.14
VEGFA-225ENST00000523950 PCDHA10Q9Y5I2 948 aa14.19□□□□□ -0.14
VEGFA-225ENST00000523950 SLC37A4O43826 429 aa14.18□□□□□ -0.14
VEGFA-225ENST00000523950 BAG4O95429 457 aaKnown RBP14.18□□□□□ -0.14
VEGFA-225ENST00000523950 RPLP2P05387 115 aaKnown RBP14.18□□□□□ -0.14
VEGFA-225ENST00000523950 U2AF2P26368 475 aaKnown RBP eCLIP14.18□□□□□ -0.142e-48■□□□□ 11.2
VEGFA-225ENST00000523950 MDM2Q00987 491 aaPredicted RBP14.18□□□□□ -0.14
VEGFA-225ENST00000523950 FPGSQ05932 587 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms