RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 PCDHA6Q9UN73 950 aa14.52□□□□□ -0.09
TOP1MT-217ENST00000523417 PCDHA8Q9Y5H6 950 aa14.52□□□□□ -0.09
TOP1MT-217ENST00000523417 TANC1Q9C0D5 1861 aa14.52□□□□□ -0.09
TOP1MT-217ENST00000523417 SPTBN5Q9NRC6 3674 aaKnown RBP14.52□□□□□ -0.09
TOP1MT-217ENST00000523417 MBLAC1A4D2B0 266 aaPredicted RBP14.51□□□□□ -0.09
TOP1MT-217ENST00000523417 hCG_1984214I3L0E3 225 aa14.51□□□□□ -0.09
TOP1MT-217ENST00000523417 FOSP01100 380 aaPredicted RBP14.51□□□□□ -0.09
TOP1MT-217ENST00000523417 TAF2Q6P1X5 1199 aa14.51□□□□□ -0.09
TOP1MT-217ENST00000523417 APOA5Q6Q788 366 aa14.51□□□□□ -0.09
TOP1MT-217ENST00000523417 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.51□□□□□ -0.093e-7■■□□□ 11.8
TOP1MT-217ENST00000523417 FAM43BQ6ZT52 329 aaPredicted RBP14.51□□□□□ -0.09
TOP1MT-217ENST00000523417 TMCO2Q7Z6W1 182 aaPredicted RBP14.51□□□□□ -0.09
TOP1MT-217ENST00000523417 ZNF713Q8N859 430 aaPredicted RBP14.51□□□□□ -0.09
TOP1MT-217ENST00000523417 EHMT1Q9H9B1 1298 aa14.51□□□□□ -0.09
TOP1MT-217ENST00000523417 TELO2Q9Y4R8 837 aa14.51□□□□□ -0.09
TOP1MT-217ENST00000523417 PRRC2BQ5JSZ5 2229 aaKnown RBP14.51□□□□□ -0.09
TOP1MT-217ENST00000523417 MYH7BA7E2Y1 1941 aa14.51□□□□□ -0.09
TOP1MT-217ENST00000523417 GBF1Q92538 1859 aa14.5□□□□□ -0.09
TOP1MT-217ENST00000523417 NCOR1O75376 2440 aa14.5□□□□□ -0.09
TOP1MT-217ENST00000523417 SPDYE3A6NKU9 549 aa14.5□□□□□ -0.09
TOP1MT-217ENST00000523417 RPLP2P05387 115 aaKnown RBP14.5□□□□□ -0.09
TOP1MT-217ENST00000523417 HMGB1P09429 215 aaKnown RBP14.5□□□□□ -0.09
TOP1MT-217ENST00000523417 RXRAP19793 462 aa14.5□□□□□ -0.09
TOP1MT-217ENST00000523417 TCF7P36402 384 aaPredicted RBP14.5□□□□□ -0.09
TOP1MT-217ENST00000523417 MTMR1Q13613 665 aa14.5□□□□□ -0.09
TOP1MT-217ENST00000523417 SPRED2Q7Z698 418 aa14.5□□□□□ -0.09
TOP1MT-217ENST00000523417 LMBR1Q8WVP7 490 aa14.5□□□□□ -0.09
TOP1MT-217ENST00000523417 KCNB2Q92953 911 aa14.5□□□□□ -0.09
TOP1MT-217ENST00000523417 HLA-CQ95604 372 aa14.5□□□□□ -0.09
TOP1MT-217ENST00000523417 SAMD11Q96NU1 681 aa14.5□□□□□ -0.09
TOP1MT-217ENST00000523417 GLT8D2Q9H1C3 349 aa14.5□□□□□ -0.09
TOP1MT-217ENST00000523417 SMARCAD1Q9H4L7 1026 aa14.5□□□□□ -0.09
TOP1MT-217ENST00000523417 RIC8AQ9NPQ8 531 aa14.5□□□□□ -0.09
TOP1MT-217ENST00000523417 ERAP1Q9NZ08 941 aa14.5□□□□□ -0.09
TOP1MT-217ENST00000523417 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.49□□□□□ -0.09
TOP1MT-217ENST00000523417 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.49□□□□□ -0.09
TOP1MT-217ENST00000523417 RRN3P2A6NIE6 340 aa14.49□□□□□ -0.09
TOP1MT-217ENST00000523417 CHRNA1P02708 482 aa14.49□□□□□ -0.09
TOP1MT-217ENST00000523417 KRT32Q14532 448 aa14.49□□□□□ -0.09
TOP1MT-217ENST00000523417 MARCH8Q5T0T0 291 aa14.49□□□□□ -0.09
TOP1MT-217ENST00000523417 UTP14CQ5TAP6 766 aaKnown RBP14.49□□□□□ -0.09
TOP1MT-217ENST00000523417 KRT40Q6A162 431 aa14.49□□□□□ -0.09
TOP1MT-217ENST00000523417 PPP1R18Q6NYC8 613 aa14.49□□□□□ -0.09
TOP1MT-217ENST00000523417 TRIM50Q86XT4 487 aa14.49□□□□□ -0.09
TOP1MT-217ENST00000523417 FBXL16Q8N461 479 aa14.49□□□□□ -0.09
TOP1MT-217ENST00000523417 CCDC82Q8N4S0 544 aa14.49□□□□□ -0.09
TOP1MT-217ENST00000523417 TNPO1Q92973 898 aaKnown RBP14.49□□□□□ -0.09
TOP1MT-217ENST00000523417 UHRF1Q96T88 793 aaPredicted RBP14.49□□□□□ -0.09
TOP1MT-217ENST00000523417 MXRA8Q9BRK3 442 aa14.49□□□□□ -0.09
TOP1MT-217ENST00000523417 LRRC2Q9BYS8 371 aa14.49□□□□□ -0.09
TOP1MT-217ENST00000523417 OSBPL7Q9BZF2 842 aa14.49□□□□□ -0.09
TOP1MT-217ENST00000523417 BRPF3Q9ULD4 1205 aa14.49□□□□□ -0.09
TOP1MT-217ENST00000523417 SQORQ9Y6N5 450 aa14.49□□□□□ -0.09
TOP1MT-217ENST00000523417 TRANK1O15050 2925 aa14.48□□□□□ -0.09
TOP1MT-217ENST00000523417 NFASCO94856 1347 aa14.48□□□□□ -0.09
TOP1MT-217ENST00000523417 hCG_1642624A0A1W2PR95 340 aa14.48□□□□□ -0.09
TOP1MT-217ENST00000523417 MEIS1O00470 390 aa14.48□□□□□ -0.09
TOP1MT-217ENST00000523417 ATG7O95352 703 aa14.48□□□□□ -0.09
TOP1MT-217ENST00000523417 ARHGAP4P98171 946 aa14.48□□□□□ -0.09
TOP1MT-217ENST00000523417 TFF2Q03403 129 aa14.48□□□□□ -0.09
TOP1MT-217ENST00000523417 UBE2SQ16763 222 aa14.48□□□□□ -0.09
TOP1MT-217ENST00000523417 WWC2Q6AWC2 1192 aa14.48□□□□□ -0.09
TOP1MT-217ENST00000523417 PLPPR4Q7Z2D5 763 aa14.48□□□□□ -0.09
TOP1MT-217ENST00000523417 RSPH3Q86UC2 560 aa14.48□□□□□ -0.09
TOP1MT-217ENST00000523417 RASEFQ8IZ41 740 aa14.48□□□□□ -0.09
TOP1MT-217ENST00000523417 MICALL1Q8N3F8 863 aa14.48□□□□□ -0.09
TOP1MT-217ENST00000523417 IL27Q8NEV9 243 aa14.48□□□□□ -0.09
TOP1MT-217ENST00000523417 KCNH7Q9NS40 1196 aa14.48□□□□□ -0.09
TOP1MT-217ENST00000523417 FAM217BQ9NTX9 383 aaPredicted RBP14.48□□□□□ -0.09
TOP1MT-217ENST00000523417 V9GY48 417 aaPredicted RBP14.48□□□□□ -0.09
TOP1MT-217ENST00000523417 ZBTB43O43298 467 aa14.47□□□□□ -0.09
TOP1MT-217ENST00000523417 CLK2P49760 499 aaKnown RBP14.47□□□□□ -0.09
TOP1MT-217ENST00000523417 MGAT3Q09327 533 aa14.47□□□□□ -0.09
TOP1MT-217ENST00000523417 SKIV2LQ15477 1246 aaKnown RBP14.47□□□□□ -0.09
TOP1MT-217ENST00000523417 ADCK5Q3MIX3 580 aa14.47□□□□□ -0.09
TOP1MT-217ENST00000523417 CEP55Q53EZ4 464 aa14.47□□□□□ -0.09
TOP1MT-217ENST00000523417 TYW1BQ6NUM6 668 aa14.47□□□□□ -0.09
TOP1MT-217ENST00000523417 NIPA1Q7RTP0 329 aa14.47□□□□□ -0.09
TOP1MT-217ENST00000523417 HEATR3Q7Z4Q2 680 aa14.47□□□□□ -0.09
TOP1MT-217ENST00000523417 MICU3Q86XE3 530 aa14.47□□□□□ -0.09
TOP1MT-217ENST00000523417 MYOCDQ8IZQ8 938 aa14.47□□□□□ -0.09
TOP1MT-217ENST00000523417 PCYT2Q99447 389 aa14.47□□□□□ -0.09
TOP1MT-217ENST00000523417 IFIH1Q9BYX4 1025 aaKnown RBP14.47□□□□□ -0.09
TOP1MT-217ENST00000523417 BARHL2Q9NY43 387 aa14.47□□□□□ -0.09
TOP1MT-217ENST00000523417 SLC9A2Q9UBY0 812 aa14.47□□□□□ -0.09
TOP1MT-217ENST00000523417 CNTNAP5Q8WYK1 1306 aa14.46□□□□□ -0.09
TOP1MT-217ENST00000523417 IGKV6D-21A0A0A0MT36 114 aa14.46□□□□□ -0.09
TOP1MT-217ENST00000523417 H3BNC9 293 aa14.46□□□□□ -0.09
TOP1MT-217ENST00000523417 STXBP3O00186 592 aa14.46□□□□□ -0.09
TOP1MT-217ENST00000523417 ENPP3O14638 875 aa14.46□□□□□ -0.09
TOP1MT-217ENST00000523417 PPFIA1Q13136 1202 aa14.46□□□□□ -0.09
TOP1MT-217ENST00000523417 AP3B2Q13367 1082 aa14.46□□□□□ -0.09
TOP1MT-217ENST00000523417 GRIK4Q16099 956 aa14.46□□□□□ -0.09
TOP1MT-217ENST00000523417 RTN1Q16799 776 aa14.46□□□□□ -0.09
TOP1MT-217ENST00000523417 RUFY4Q6ZNE9 571 aa14.46□□□□□ -0.09
TOP1MT-217ENST00000523417 GLG1Q92896 1179 aa14.46□□□□□ -0.09
TOP1MT-217ENST00000523417 JPH1Q9HDC5 661 aaPredicted RBP14.46□□□□□ -0.09
TOP1MT-217ENST00000523417 CCDC196A0A1B0GTZ2 297 aa14.45□□□□□ -0.1
TOP1MT-217ENST00000523417 SMCO2A6NFE2 343 aa14.45□□□□□ -0.1
TOP1MT-217ENST00000523417 CDC45O75419 566 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms