RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 DHX40Q8IX18 779 aaKnown RBP7.74□□□□□ -1.17
CSMD1-211ENST00000523062 MLKLQ8NB16 471 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 NLGN2Q8NFZ4 835 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 AK8Q96MA6 479 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 AMNQ9BXJ7 453 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 TRIM5Q9C035 493 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 TMEM60Q9H2L4 133 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 PSTPIP2Q9H939 334 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 GOLGA2P5Q9HBQ8 144 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 SPON1Q9HCB6 807 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 ZFP64Q9NPA5 681 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 TMEM260Q9NX78 707 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 PGAP2Q9UHJ9 254 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 MAN1B1Q9UKM7 699 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 PHF24Q9UPV7 400 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 PCDHA1Q9Y5I3 950 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 GJA3Q9Y6H8 435 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 ZNF541Q9H0D2 1346 aa7.74□□□□□ -1.17
CSMD1-211ENST00000523062 TRIM66O15016 1216 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 FOXN1O15353 648 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 PLA2G6O60733 806 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 MSNP26038 577 aaKnown RBP7.73□□□□□ -1.17
CSMD1-211ENST00000523062 UBA7P41226 1012 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 STAT6P42226 847 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 SARSP49591 514 aaKnown RBP7.73□□□□□ -1.17
CSMD1-211ENST00000523062 STAT2P52630 851 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 MYL5Q02045 173 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 MORC3Q14149 939 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 CALCRLQ16602 461 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 UBE2SQ16763 222 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 TMEM266Q2M3C6 531 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 WDR44Q5JSH3 913 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 ARTNQ5T4W7 220 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 DCAF15Q66K64 600 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 FAM160B2Q86V87 743 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 PLA2G4DQ86XP0 818 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 APOBEC3FQ8IUX4 373 aaKnown RBP7.73□□□□□ -1.17
CSMD1-211ENST00000523062 GRAMD1CQ8IYS0 662 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 RASSF8Q8NHQ8 419 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 SPATA20Q8TB22 786 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 ACER1Q8TDN7 264 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 LRRN4Q8WUT4 740 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 HOOK2Q96ED9 719 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 PAGE5Q96GU1 130 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 MRFAP1L1Q96HT8 127 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 NUP88Q99567 741 aaPredicted RBP7.73□□□□□ -1.17
CSMD1-211ENST00000523062 CCSER1Q9C0I3 900 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 CUEDC2Q9H467 287 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 VCPKMTQ9H867 229 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 MAGEF1Q9HAY2 307 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 DISC1Q9NRI5 854 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 CNOT7Q9UIV1 285 aaKnown RBP7.73□□□□□ -1.17
CSMD1-211ENST00000523062 ZKSCAN5Q9Y2L8 839 aa7.73□□□□□ -1.17
CSMD1-211ENST00000523062 H7C1D1 291 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 TDP2O95551 362 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 F11P03951 625 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 MYL1P05976 194 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 THBS1P07996 1170 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 LMNB1P20700 586 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 ECE1P42892 770 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 AFMP43652 599 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 PRELPP51888 382 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 DPYDQ12882 1025 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 NR6A1Q15406 480 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 TBC1D10BQ4KMP7 808 aaPredicted RBP7.72□□□□□ -1.17
CSMD1-211ENST00000523062 CT47A1Q5JQC4 288 aaPredicted RBP7.72□□□□□ -1.17
CSMD1-211ENST00000523062 FAM83BQ5T0W9 1011 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 RRAGBQ5VZM2 374 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 ISM2Q6H9L7 571 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 PPP4R3AQ6IN85 833 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 MOXD1Q6UVY6 613 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 MIGA2Q7L4E1 593 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 SPICE1Q8N0Z3 855 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 CHURC1Q8WUH1 139 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 TEPSINQ96N21 525 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 GSDMAQ96QA5 445 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 FEZ1Q99689 392 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 ANO3Q9BYT9 981 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 RAB34Q9BZG1 259 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 RRAGDQ9NQL2 400 aaPredicted RBP7.72□□□□□ -1.17
CSMD1-211ENST00000523062 HACL1Q9UJ83 578 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 PRR12Q9ULL5 1215 aa7.72□□□□□ -1.17
CSMD1-211ENST00000523062 SLC37A4O43826 429 aa7.71□□□□□ -1.18
CSMD1-211ENST00000523062 EGFRP00533 1210 aa7.71□□□□□ -1.18
CSMD1-211ENST00000523062 FOSP01100 380 aaPredicted RBP7.71□□□□□ -1.18
CSMD1-211ENST00000523062 ERCC5P28715 1186 aaPredicted RBP7.71□□□□□ -1.18
CSMD1-211ENST00000523062 GATA4P43694 442 aa7.71□□□□□ -1.18
CSMD1-211ENST00000523062 NCAPHQ15003 741 aa7.71□□□□□ -1.18
CSMD1-211ENST00000523062 KARSQ15046 597 aaKnown RBP7.71□□□□□ -1.18
CSMD1-211ENST00000523062 USH1GQ495M9 461 aa7.71□□□□□ -1.18
CSMD1-211ENST00000523062 PPP2R2DQ66LE6 453 aa7.71□□□□□ -1.18
CSMD1-211ENST00000523062 ARHGAP27Q6ZUM4 889 aa7.71□□□□□ -1.18
CSMD1-211ENST00000523062 CABP7Q86V35 215 aa7.71□□□□□ -1.18
CSMD1-211ENST00000523062 KRTAP19-1Q8IUB9 90 aa7.71□□□□□ -1.18
CSMD1-211ENST00000523062 DRC7Q8IY82 874 aa7.71□□□□□ -1.18
CSMD1-211ENST00000523062 SPC24Q8NBT2 197 aa7.71□□□□□ -1.18
CSMD1-211ENST00000523062 LPAR1Q92633 364 aa7.71□□□□□ -1.18
CSMD1-211ENST00000523062 CALML4Q96GE6 196 aa7.71□□□□□ -1.18
CSMD1-211ENST00000523062 MTMR9Q96QG7 549 aa7.71□□□□□ -1.18
CSMD1-211ENST00000523062 ZNF341Q9BYN7 854 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms