RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 RGS2P41220 211 aa7.87□□□□□ -1.15
VPS13B-211ENST00000522802 HERVK_113P62684 666 aa7.87□□□□□ -1.15
VPS13B-211ENST00000522802 IRX3P78415 501 aaPredicted RBP7.87□□□□□ -1.15
VPS13B-211ENST00000522802 MRPL58Q14197 206 aaKnown RBP7.87□□□□□ -1.15
VPS13B-211ENST00000522802 PDE3AQ14432 1141 aa7.87□□□□□ -1.15
VPS13B-211ENST00000522802 SHROOM1Q2M3G4 852 aaPredicted RBP7.87□□□□□ -1.15
VPS13B-211ENST00000522802 FOXD4L6Q3SYB3 417 aaPredicted RBP7.87□□□□□ -1.15
VPS13B-211ENST00000522802 RABL6Q3YEC7 729 aaPredicted RBP7.87□□□□□ -1.15
VPS13B-211ENST00000522802 SHISA2Q6UWI4 295 aa7.87□□□□□ -1.15
VPS13B-211ENST00000522802 FOXD4L3Q6VB84 417 aaPredicted RBP7.87□□□□□ -1.15
VPS13B-211ENST00000522802 GPR142Q7Z601 462 aa7.87□□□□□ -1.15
VPS13B-211ENST00000522802 TRPV1Q8NER1 839 aa7.87□□□□□ -1.15
VPS13B-211ENST00000522802 TRIM43Q96BQ3 446 aaPredicted RBP7.87□□□□□ -1.15
VPS13B-211ENST00000522802 ASB2Q96Q27 587 aa7.87□□□□□ -1.15
VPS13B-211ENST00000522802 UHRF1Q96T88 793 aaPredicted RBP7.87□□□□□ -1.15
VPS13B-211ENST00000522802 C9orf78Q9NZ63 289 aaPredicted RBP7.87□□□□□ -1.15
VPS13B-211ENST00000522802 THEGQ9P2T0 379 aa7.87□□□□□ -1.15
VPS13B-211ENST00000522802 DDX20Q9UHI6 824 aaKnown RBP7.87□□□□□ -1.15
VPS13B-211ENST00000522802 MUC6Q6W4X9 2439 aa7.87□□□□□ -1.15
VPS13B-211ENST00000522802 SYNGAP1Q96PV0 1343 aa7.86□□□□□ -1.15
VPS13B-211ENST00000522802 SALL1Q9NSC2 1324 aa7.86□□□□□ -1.15
VPS13B-211ENST00000522802 DDX3YO15523 660 aaKnown RBP7.86□□□□□ -1.15
VPS13B-211ENST00000522802 EIF4EBP3O60516 100 aaPredicted RBP7.86□□□□□ -1.15
VPS13B-211ENST00000522802 ADAM11O75078 769 aa7.86□□□□□ -1.15
VPS13B-211ENST00000522802 MAPK4P31152 587 aa7.86□□□□□ -1.15
VPS13B-211ENST00000522802 BTDP43251 543 aa7.86□□□□□ -1.15
VPS13B-211ENST00000522802 ERVK-24P63145 666 aa7.86□□□□□ -1.15
VPS13B-211ENST00000522802 JAG1P78504 1218 aa7.86□□□□□ -1.15
VPS13B-211ENST00000522802 PABPC4Q13310 644 aaKnown RBP eCLIP7.86□□□□□ -1.15
VPS13B-211ENST00000522802 SNX17Q15036 470 aa7.86□□□□□ -1.15
VPS13B-211ENST00000522802 GJC2Q5T442 439 aaPredicted RBP7.86□□□□□ -1.15
VPS13B-211ENST00000522802 SLC4A10Q6U841 1118 aa7.86□□□□□ -1.15
VPS13B-211ENST00000522802 TMEM130Q8N3G9 435 aa7.86□□□□□ -1.15
VPS13B-211ENST00000522802 GPRC5AQ8NFJ5 357 aa7.86□□□□□ -1.15
VPS13B-211ENST00000522802 ATXN2LQ8WWM7 1075 aaKnown RBP7.86□□□□□ -1.15
VPS13B-211ENST00000522802 LPAR1Q92633 364 aa7.86□□□□□ -1.15
VPS13B-211ENST00000522802 P2RX7Q99572 595 aaKnown RBP7.86□□□□□ -1.15
VPS13B-211ENST00000522802 PAGR1Q9BTK6 254 aa7.86□□□□□ -1.15
VPS13B-211ENST00000522802 NRSN2Q9GZP1 204 aa7.86□□□□□ -1.15
VPS13B-211ENST00000522802 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.86□□□□□ -1.152e-8■■■■■ 42.5
VPS13B-211ENST00000522802 RBPJLQ9UBG7 517 aa7.86□□□□□ -1.15
VPS13B-211ENST00000522802 FOCADQ5VW36 1801 aa7.86□□□□□ -1.15
VPS13B-211ENST00000522802 WDFY4Q6ZS81 3184 aa7.86□□□□□ -1.15
VPS13B-211ENST00000522802 UTYO14607 1347 aa7.85□□□□□ -1.15
VPS13B-211ENST00000522802 C9orf172C9J069 976 aa7.85□□□□□ -1.15
VPS13B-211ENST00000522802 VAMP4O75379 141 aa7.85□□□□□ -1.15
VPS13B-211ENST00000522802 SLC5A1P13866 664 aa7.85□□□□□ -1.15
VPS13B-211ENST00000522802 CNGA1P29973 690 aa7.85□□□□□ -1.15
VPS13B-211ENST00000522802 CYP2C19P33261 490 aa7.85□□□□□ -1.15
VPS13B-211ENST00000522802 PHKA1P46020 1223 aa7.85□□□□□ -1.15
VPS13B-211ENST00000522802 GSTM4Q03013 218 aa7.85□□□□□ -1.15
VPS13B-211ENST00000522802 ANO1Q5XXA6 986 aa7.85□□□□□ -1.15
VPS13B-211ENST00000522802 SLC39A5Q6ZMH5 540 aa7.85□□□□□ -1.15
VPS13B-211ENST00000522802 PLEKHH3Q7Z736 793 aa7.85□□□□□ -1.15
VPS13B-211ENST00000522802 PSMG3-AS1Q96PY0 264 aa7.85□□□□□ -1.15
VPS13B-211ENST00000522802 NACC1Q96RE7 527 aa7.85□□□□□ -1.15
VPS13B-211ENST00000522802 OSBPL5Q9H0X9 879 aaPredicted RBP7.85□□□□□ -1.15
VPS13B-211ENST00000522802 MRS2Q9HD23 443 aa7.85□□□□□ -1.15
VPS13B-211ENST00000522802 TMEM39AQ9NV64 488 aa7.85□□□□□ -1.15
VPS13B-211ENST00000522802 A0A0G2JMZ2 1700 aa7.85□□□□□ -1.15
VPS13B-211ENST00000522802 LRRC37A2A6NM11 1700 aa7.85□□□□□ -1.15
VPS13B-211ENST00000522802 MROH7-TTC4A0A0A0MT08 1334 aa7.84□□□□□ -1.15
VPS13B-211ENST00000522802 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.84□□□□□ -1.15
VPS13B-211ENST00000522802 CNMDO75829 334 aa7.84□□□□□ -1.15
VPS13B-211ENST00000522802 ALDH1L1O75891 902 aa7.84□□□□□ -1.15
VPS13B-211ENST00000522802 CYBAP13498 195 aa7.84□□□□□ -1.15
VPS13B-211ENST00000522802 CAP2P40123 477 aa7.84□□□□□ -1.15
VPS13B-211ENST00000522802 RHBDL3P58872 404 aa7.84□□□□□ -1.15
VPS13B-211ENST00000522802 ADGRE1Q14246 886 aa7.84□□□□□ -1.15
VPS13B-211ENST00000522802 CD163Q86VB7 1156 aa7.84□□□□□ -1.15
VPS13B-211ENST00000522802 DZIP1Q86YF9 867 aaKnown RBP7.84□□□□□ -1.15
VPS13B-211ENST00000522802 ZNF384Q8TF68 577 aa7.84□□□□□ -1.15
VPS13B-211ENST00000522802 LPIN2Q92539 896 aa7.84□□□□□ -1.15
VPS13B-211ENST00000522802 TIFAQ96CG3 184 aa7.84□□□□□ -1.15
VPS13B-211ENST00000522802 TRIM56Q9BRZ2 755 aaKnown RBP7.84□□□□□ -1.15
VPS13B-211ENST00000522802 MRPL18Q9H0U6 180 aaKnown RBP7.84□□□□□ -1.15
VPS13B-211ENST00000522802 PRDM12Q9H4Q4 367 aa7.84□□□□□ -1.15
VPS13B-211ENST00000522802 MYO9BQ13459 2157 aa7.84□□□□□ -1.15
VPS13B-211ENST00000522802 C1QTNF9BB2RNN3 333 aa7.83□□□□□ -1.16
VPS13B-211ENST00000522802 KBTBD13C9JR72 458 aa7.83□□□□□ -1.16
VPS13B-211ENST00000522802 MSCO60682 206 aa7.83□□□□□ -1.16
VPS13B-211ENST00000522802 ADORA1P30542 326 aa7.83□□□□□ -1.16
VPS13B-211ENST00000522802 HOXA7P31268 230 aaPredicted RBP7.83□□□□□ -1.16
VPS13B-211ENST00000522802 RFX5P48382 616 aaPredicted RBP7.83□□□□□ -1.16
VPS13B-211ENST00000522802 BACE1P56817 501 aa7.83□□□□□ -1.16
VPS13B-211ENST00000522802 NLRP12P59046 1061 aa7.83□□□□□ -1.16
VPS13B-211ENST00000522802 MRPS5P82675 430 aaKnown RBP7.83□□□□□ -1.16
VPS13B-211ENST00000522802 NRG1Q02297 640 aaPredicted RBP7.83□□□□□ -1.16
VPS13B-211ENST00000522802 PPP2R3AQ06190 1150 aa7.83□□□□□ -1.16
VPS13B-211ENST00000522802 RASGRF1Q13972 1273 aa7.83□□□□□ -1.16
VPS13B-211ENST00000522802 CCDC85BQ15834 202 aaPredicted RBP7.83□□□□□ -1.16
VPS13B-211ENST00000522802 ATP2B3Q16720 1220 aa7.83□□□□□ -1.16
VPS13B-211ENST00000522802 MFSD14CQ5VZR4 134 aa7.83□□□□□ -1.16
VPS13B-211ENST00000522802 ATG9AQ7Z3C6 839 aa7.83□□□□□ -1.16
VPS13B-211ENST00000522802 NPLOC4Q8TAT6 608 aa7.83□□□□□ -1.16
VPS13B-211ENST00000522802 FERMT2Q96AC1 680 aa7.83□□□□□ -1.16
VPS13B-211ENST00000522802 KRTAP9-2Q9BYQ4 174 aa7.83□□□□□ -1.16
VPS13B-211ENST00000522802 CEP44Q9C0F1 390 aa7.83□□□□□ -1.16
VPS13B-211ENST00000522802 DNAJC18Q9H819 358 aa7.83□□□□□ -1.16
VPS13B-211ENST00000522802 TMOD4Q9NZQ9 345 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms