RNA–Protein interactions for RNA: ENST00000522702.5

FAM49B-222, Transcript of family with sequence similarity 49 member B, human

TSL 4

Gene FAM49B, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-222	ENST00000522702	TRBV23OR9-2	A0A075B6M9	112 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	NPHP3-ACAD11	A0A0J9YXS1	232 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	C2orf71	A6NGG8	1288 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	MROH6	A6NGR9	719 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	PRODH	O43272	600 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	PPP1R11	O60927	126 aa	Predicted RBP	5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	VAMP4	O75379	141 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	PAM	P19021	973 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	HOXC12	P31275	282 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	RHBDL3	P58872	404 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	SUMO1	P63165	101 aa	Known RBP	5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	AMPD2	Q01433	879 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	MAP4K2	Q12851	820 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	DPY19L1	Q2PZI1	675 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	BRDT	Q58F21	947 aa	Predicted RBP	5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	TRIM61	Q5EBN2	209 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	FAM26F	Q5R3K3	315 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	SLC35F1	Q5T1Q4	408 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	WWC2	Q6AWC2	1192 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	MCTP2	Q6DN12	878 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	TTLL6	Q8N841	843 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	KY	Q8NBH2	561 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	KREMEN2	Q8NCW0	462 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	COPS5	Q92905	334 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	GORASP1	Q9BQQ3	440 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	MTA3	Q9BTC8	594 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	MRPL4	Q9BYD3	311 aa	Known RBP	5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	FAM126A	Q9BYI3	521 aa	Predicted RBP	5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	KRTAP3-1	Q9BYR8	98 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	CYP26B1	Q9NR63	512 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	5.26	□□□□□ -1.57	3e-7	■□□□□ 9.5
FAM49B-222	ENST00000522702	FBLN5	Q9UBX5	448 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	MCM8	Q9UJA3	840 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	ATP8A1	Q9Y2Q0	1164 aa		5.26	□□□□□ -1.57
FAM49B-222	ENST00000522702	STXBP3	O00186	592 aa		5.25	□□□□□ -1.57
FAM49B-222	ENST00000522702	PLD2	O14939	933 aa		5.25	□□□□□ -1.57
FAM49B-222	ENST00000522702	KCNQ2	O43526	872 aa		5.25	□□□□□ -1.57
FAM49B-222	ENST00000522702	NPHS1	O60500	1241 aa		5.25	□□□□□ -1.57
FAM49B-222	ENST00000522702	FUCA1	P04066	466 aa		5.25	□□□□□ -1.57
FAM49B-222	ENST00000522702	C6	P13671	934 aa		5.25	□□□□□ -1.57
FAM49B-222	ENST00000522702	SOX5	P35711	763 aa		5.25	□□□□□ -1.57
FAM49B-222	ENST00000522702	EXOSC10	Q01780	885 aa	Known RBP	5.25	□□□□□ -1.57
FAM49B-222	ENST00000522702	SURF1	Q15526	300 aa		5.25	□□□□□ -1.57
FAM49B-222	ENST00000522702	NTRK3	Q16288	839 aa		5.25	□□□□□ -1.57
FAM49B-222	ENST00000522702	FNDC3B	Q53EP0	1204 aa	Known RBP	5.25	□□□□□ -1.57
FAM49B-222	ENST00000522702	DENND5A	Q6IQ26	1287 aa		5.25	□□□□□ -1.57
FAM49B-222	ENST00000522702	TMED8	Q6PL24	325 aa	Predicted RBP	5.25	□□□□□ -1.57
FAM49B-222	ENST00000522702	CD300LD	Q6UXZ3	194 aa		5.25	□□□□□ -1.57
FAM49B-222	ENST00000522702	RAVER1	Q8IY67	606 aa	Known RBP	5.25	□□□□□ -1.57
FAM49B-222	ENST00000522702	NIM1K	Q8IY84	436 aa		5.25	□□□□□ -1.57
FAM49B-222	ENST00000522702	TMEM145	Q8NBT3	493 aa		5.25	□□□□□ -1.57
FAM49B-222	ENST00000522702	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	5.25	□□□□□ -1.57
FAM49B-222	ENST00000522702	TSR2	Q969E8	191 aa	Known RBP	5.25	□□□□□ -1.57
FAM49B-222	ENST00000522702	C8orf48	Q96LL4	319 aa		5.25	□□□□□ -1.57
FAM49B-222	ENST00000522702	CCDC140	Q96MF4	163 aa		5.25	□□□□□ -1.57
FAM49B-222	ENST00000522702	CLUHP3	Q96NS8	147 aa		5.25	□□□□□ -1.57
FAM49B-222	ENST00000522702	BACE2	Q9Y5Z0	518 aa		5.25	□□□□□ -1.57
FAM49B-222	ENST00000522702	EIF3J	O75822	258 aa	Known RBP	5.24	□□□□□ -1.57
FAM49B-222	ENST00000522702	NTRK1	P04629	796 aa		5.24	□□□□□ -1.57
FAM49B-222	ENST00000522702	C8B	P07358	591 aa		5.24	□□□□□ -1.57
FAM49B-222	ENST00000522702	THBS2	P35442	1172 aa		5.24	□□□□□ -1.57
FAM49B-222	ENST00000522702	SCRN1	Q12765	414 aa		5.24	□□□□□ -1.57
FAM49B-222	ENST00000522702	PABPC4	Q13310	644 aa	Known RBP eCLIP	5.24	□□□□□ -1.57
FAM49B-222	ENST00000522702	BIRC2	Q13490	618 aa		5.24	□□□□□ -1.57
FAM49B-222	ENST00000522702	TESK1	Q15569	626 aa		5.24	□□□□□ -1.57
FAM49B-222	ENST00000522702	TM4SF20	Q53R12	229 aa		5.24	□□□□□ -1.57
FAM49B-222	ENST00000522702	ETV3L	Q6ZN32	361 aa		5.24	□□□□□ -1.57
FAM49B-222	ENST00000522702	USP51	Q70EK9	711 aa		5.24	□□□□□ -1.57
FAM49B-222	ENST00000522702	LIMS2	Q7Z4I7	341 aa		5.24	□□□□□ -1.57
FAM49B-222	ENST00000522702	ZC3H18	Q86VM9	953 aa	Known RBP	5.24	□□□□□ -1.57
FAM49B-222	ENST00000522702	DDX42	Q86XP3	938 aa	Known RBP eCLIP	5.24	□□□□□ -1.57
FAM49B-222	ENST00000522702	THNSL2	Q86YJ6	484 aa		5.24	□□□□□ -1.57
FAM49B-222	ENST00000522702	SMC5	Q8IY18	1101 aa		5.24	□□□□□ -1.57
FAM49B-222	ENST00000522702	UBR7	Q8N806	425 aa		5.24	□□□□□ -1.57
FAM49B-222	ENST00000522702	KCTD13	Q8WZ19	329 aa		5.24	□□□□□ -1.57
FAM49B-222	ENST00000522702	NINJ1	Q92982	152 aa		5.24	□□□□□ -1.57
FAM49B-222	ENST00000522702	LCOR	Q96JN0	433 aa	Predicted RBP	5.24	□□□□□ -1.57
FAM49B-222	ENST00000522702	MRI	Q9BWK5	157 aa		5.24	□□□□□ -1.57
FAM49B-222	ENST00000522702	GEMIN8	Q9NWZ8	242 aa	Known RBP	5.24	□□□□□ -1.57
FAM49B-222	ENST00000522702	ST6GALNAC2	Q9UJ37	374 aa		5.24	□□□□□ -1.57
FAM49B-222	ENST00000522702	ARNTL	O00327	626 aa		5.23	□□□□□ -1.57
FAM49B-222	ENST00000522702	DDX3X	O00571	662 aa	Known RBP eCLIP	5.23	□□□□□ -1.57	2e-15	■■■■■ 35.5
FAM49B-222	ENST00000522702	PLIN1	O60240	522 aa		5.23	□□□□□ -1.57
FAM49B-222	ENST00000522702	RAPGEF3	O95398	923 aa		5.23	□□□□□ -1.57
FAM49B-222	ENST00000522702	CP	P00450	1065 aa		5.23	□□□□□ -1.57
FAM49B-222	ENST00000522702	THBD	P07204	575 aa		5.23	□□□□□ -1.57
FAM49B-222	ENST00000522702	SNRPB2	P08579	225 aa	Known RBP	5.23	□□□□□ -1.57
FAM49B-222	ENST00000522702	TACR2	P21452	398 aa		5.23	□□□□□ -1.57
FAM49B-222	ENST00000522702	STAT3	P40763	770 aa		5.23	□□□□□ -1.57
FAM49B-222	ENST00000522702	PPP2R5A	Q15172	486 aa		5.23	□□□□□ -1.57
FAM49B-222	ENST00000522702	PRSS53	Q2L4Q9	553 aa		5.23	□□□□□ -1.57
FAM49B-222	ENST00000522702	SPRED1	Q7Z699	444 aa		5.23	□□□□□ -1.57
FAM49B-222	ENST00000522702	DCP2	Q8IU60	420 aa	Known RBP	5.23	□□□□□ -1.57
FAM49B-222	ENST00000522702	TXNDC5	Q8NBS9	432 aa	Known RBP	5.23	□□□□□ -1.57
FAM49B-222	ENST00000522702	GSTCD	Q8NEC7	633 aa		5.23	□□□□□ -1.57
FAM49B-222	ENST00000522702	ATL2	Q8NHH9	583 aa		5.23	□□□□□ -1.57
FAM49B-222	ENST00000522702	NPLOC4	Q8TAT6	608 aa		5.23	□□□□□ -1.57
FAM49B-222	ENST00000522702	FRS2	Q8WU20	508 aa		5.23	□□□□□ -1.57
FAM49B-222	ENST00000522702	RPS6KC1	Q96S38	1066 aa		5.23	□□□□□ -1.57
FAM49B-222	ENST00000522702	CDK5RAP1	Q96SZ6	601 aa	Known RBP	5.23	□□□□□ -1.57

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