RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 TNRC18O15417 2968 aaPredicted RBP14.67□□□□□ -0.06
CPNE3-205ENST00000522240 CTAGE5O15320 804 aa14.67□□□□□ -0.06
CPNE3-205ENST00000522240 POLR2DO15514 142 aaKnown RBP14.67□□□□□ -0.06
CPNE3-205ENST00000522240 TRPA1O75762 1119 aa14.67□□□□□ -0.06
CPNE3-205ENST00000522240 TBC1D8O95759 1140 aa14.67□□□□□ -0.06
CPNE3-205ENST00000522240 MUTP22033 750 aa14.67□□□□□ -0.06
CPNE3-205ENST00000522240 KIF22Q14807 665 aa14.67□□□□□ -0.06
CPNE3-205ENST00000522240 E2F4Q16254 413 aa14.67□□□□□ -0.06
CPNE3-205ENST00000522240 OLFML2BQ68BL8 750 aa14.67□□□□□ -0.06
CPNE3-205ENST00000522240 NCAPH2Q6IBW4 605 aa14.67□□□□□ -0.06
CPNE3-205ENST00000522240 ZNF746Q6NUN9 644 aaPredicted RBP14.67□□□□□ -0.06
CPNE3-205ENST00000522240 GIMAP8Q8ND71 665 aaPredicted RBP14.67□□□□□ -0.06
CPNE3-205ENST00000522240 NPLOC4Q8TAT6 608 aa14.67□□□□□ -0.06
CPNE3-205ENST00000522240 SDF4Q9BRK5 362 aa14.67□□□□□ -0.06
CPNE3-205ENST00000522240 NT5C3AQ9H0P0 336 aa14.67□□□□□ -0.06
CPNE3-205ENST00000522240 UNC45AQ9H3U1 944 aa14.67□□□□□ -0.06
CPNE3-205ENST00000522240 STK17AQ9UEE5 414 aa14.67□□□□□ -0.06
CPNE3-205ENST00000522240 GJD2Q9UKL4 321 aa14.67□□□□□ -0.06
CPNE3-205ENST00000522240 A0A087X0B3 334 aa14.66□□□□□ -0.06
CPNE3-205ENST00000522240 ACTN4O43707 911 aaKnown RBP14.66□□□□□ -0.06
CPNE3-205ENST00000522240 LETM1O95202 739 aaPredicted RBP14.66□□□□□ -0.06
CPNE3-205ENST00000522240 UBA1P22314 1058 aaKnown RBP14.66□□□□□ -0.06
CPNE3-205ENST00000522240 CTGFP29279 349 aa14.66□□□□□ -0.06
CPNE3-205ENST00000522240 CDC25AP30304 524 aa14.66□□□□□ -0.06
CPNE3-205ENST00000522240 SFNP31947 248 aa14.66□□□□□ -0.06
CPNE3-205ENST00000522240 PSMC4P43686 418 aa14.66□□□□□ -0.06
CPNE3-205ENST00000522240 JAK3P52333 1124 aa14.66□□□□□ -0.06
CPNE3-205ENST00000522240 KARSQ15046 597 aaKnown RBP14.66□□□□□ -0.06
CPNE3-205ENST00000522240 EPHA7Q15375 998 aa14.66□□□□□ -0.06
CPNE3-205ENST00000522240 TMEM119Q4V9L6 283 aa14.66□□□□□ -0.06
CPNE3-205ENST00000522240 KANK3Q6NY19 840 aa14.66□□□□□ -0.06
CPNE3-205ENST00000522240 KRBA2Q6ZNG9 492 aa14.66□□□□□ -0.06
CPNE3-205ENST00000522240 FBXO16Q8IX29 292 aaPredicted RBP14.66□□□□□ -0.06
CPNE3-205ENST00000522240 IQUBQ8NA54 791 aa14.66□□□□□ -0.06
CPNE3-205ENST00000522240 RASSF8Q8NHQ8 419 aa14.66□□□□□ -0.06
CPNE3-205ENST00000522240 SCFD2Q8WU76 684 aa14.66□□□□□ -0.06
CPNE3-205ENST00000522240 TRIM47Q96LD4 638 aa14.66□□□□□ -0.06
CPNE3-205ENST00000522240 TINF2Q9BSI4 451 aa14.66□□□□□ -0.06
CPNE3-205ENST00000522240 POLR3CQ9BUI4 534 aaPredicted RBP14.66□□□□□ -0.06
CPNE3-205ENST00000522240 KATNBL1Q9H079 304 aa14.66□□□□□ -0.06
CPNE3-205ENST00000522240 TUFT1Q9NNX1 390 aa14.66□□□□□ -0.06
CPNE3-205ENST00000522240 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.66□□□□□ -0.06
CPNE3-205ENST00000522240 DOCK3Q8IZD9 2030 aa14.65□□□□□ -0.06
CPNE3-205ENST00000522240 LOXHD1Q8IVV2 1947 aa14.65□□□□□ -0.06
CPNE3-205ENST00000522240 RBM47A0AV96 593 aaKnown RBP14.65□□□□□ -0.06
CPNE3-205ENST00000522240 WDR64B1ANS9 1081 aa14.65□□□□□ -0.06
CPNE3-205ENST00000522240 ATP9AO75110 1047 aa14.65□□□□□ -0.06
CPNE3-205ENST00000522240 SLFN14P0C7P3 912 aa14.65□□□□□ -0.06
CPNE3-205ENST00000522240 XRCC5P13010 732 aaKnown RBP14.65□□□□□ -0.06
CPNE3-205ENST00000522240 PLCG1P19174 1290 aa14.65□□□□□ -0.06
CPNE3-205ENST00000522240 RPA1P27694 616 aa14.65□□□□□ -0.06
CPNE3-205ENST00000522240 CCT6AP40227 531 aaKnown RBP14.65□□□□□ -0.06
CPNE3-205ENST00000522240 STAT6P42226 847 aa14.65□□□□□ -0.06
CPNE3-205ENST00000522240 GRB10Q13322 594 aa14.65□□□□□ -0.06
CPNE3-205ENST00000522240 NEDD9Q14511 834 aa14.65□□□□□ -0.06
CPNE3-205ENST00000522240 RRAGBQ5VZM2 374 aa14.65□□□□□ -0.06
CPNE3-205ENST00000522240 RBM43Q6ZSC3 357 aaKnown RBP14.65□□□□□ -0.06
CPNE3-205ENST00000522240 SEPT14Q6ZU15 432 aa14.65□□□□□ -0.06
CPNE3-205ENST00000522240 SMAP1Q8IYB5 467 aaPredicted RBP14.65□□□□□ -0.06
CPNE3-205ENST00000522240 CEP57L1Q8IYX8 460 aa14.65□□□□□ -0.06
CPNE3-205ENST00000522240 PDILTQ8N807 584 aa14.65□□□□□ -0.06
CPNE3-205ENST00000522240 CNNM3Q8NE01 707 aa14.65□□□□□ -0.06
CPNE3-205ENST00000522240 DHX58Q96C10 678 aa14.65□□□□□ -0.06
CPNE3-205ENST00000522240 CDK5RAP3Q96JB5 506 aa14.65□□□□□ -0.06
CPNE3-205ENST00000522240 EIF2AK1Q9BQI3 630 aaKnown RBP14.65□□□□□ -0.06
CPNE3-205ENST00000522240 TNMDQ9H2S6 317 aa14.65□□□□□ -0.06
CPNE3-205ENST00000522240 ABHD16BQ9H3Z7 469 aa14.65□□□□□ -0.06
CPNE3-205ENST00000522240 JPH1Q9HDC5 661 aaPredicted RBP14.65□□□□□ -0.06
CPNE3-205ENST00000522240 PKD2L1Q9P0L9 805 aa14.65□□□□□ -0.06
CPNE3-205ENST00000522240 PCDH10Q9P2E7 1040 aa14.65□□□□□ -0.06
CPNE3-205ENST00000522240 HOOK1Q9UJC3 728 aaKnown RBP14.65□□□□□ -0.06
CPNE3-205ENST00000522240 GPR25O00155 361 aa14.64□□□□□ -0.07
CPNE3-205ENST00000522240 EML1O00423 815 aa14.64□□□□□ -0.07
CPNE3-205ENST00000522240 CHMP2AO43633 222 aa14.64□□□□□ -0.07
CPNE3-205ENST00000522240 SNAI1O95863 264 aaPredicted RBP14.64□□□□□ -0.07
CPNE3-205ENST00000522240 GNRH1P01148 92 aa14.64□□□□□ -0.07
CPNE3-205ENST00000522240 IGHA2P01877 340 aa14.64□□□□□ -0.07
CPNE3-205ENST00000522240 TTLL4Q14679 1199 aa14.64□□□□□ -0.07
CPNE3-205ENST00000522240 LONRF3Q496Y0 759 aa14.64□□□□□ -0.07
CPNE3-205ENST00000522240 PDXDC2PQ6P474 469 aa14.64□□□□□ -0.07
CPNE3-205ENST00000522240 CCDC62Q6P9F0 684 aa14.64□□□□□ -0.07
CPNE3-205ENST00000522240 MIER3Q7Z3K6 550 aa14.64□□□□□ -0.07
CPNE3-205ENST00000522240 TRMT44Q8IYL2 757 aaKnown RBP14.64□□□□□ -0.07
CPNE3-205ENST00000522240 EFCAB3Q8N7B9 438 aa14.64□□□□□ -0.07
CPNE3-205ENST00000522240 ERO1AQ96HE7 468 aa14.64□□□□□ -0.07
CPNE3-205ENST00000522240 PNMA5Q96PV4 448 aa14.64□□□□□ -0.07
CPNE3-205ENST00000522240 UIMC1Q96RL1 719 aa14.64□□□□□ -0.07
CPNE3-205ENST00000522240 ARHGAP39Q9C0H5 1083 aa14.64□□□□□ -0.07
CPNE3-205ENST00000522240 SLC9A2Q9UBY0 812 aa14.64□□□□□ -0.07
CPNE3-205ENST00000522240 SERTAD1Q9UHV2 236 aa14.64□□□□□ -0.07
CPNE3-205ENST00000522240 DOCK5Q9H7D0 1870 aa14.63□□□□□ -0.07
CPNE3-205ENST00000522240 POTEB3A0JP26 581 aa14.63□□□□□ -0.07
CPNE3-205ENST00000522240 DDX39AO00148 427 aaKnown RBP14.63□□□□□ -0.07
CPNE3-205ENST00000522240 MED24O75448 989 aa14.63□□□□□ -0.07
CPNE3-205ENST00000522240 ZSCAN23Q3MJ62 389 aa14.63□□□□□ -0.07
CPNE3-205ENST00000522240 NAALADL2Q58DX5 795 aa14.63□□□□□ -0.07
CPNE3-205ENST00000522240 TAPT1Q6NXT6 567 aa14.63□□□□□ -0.07
CPNE3-205ENST00000522240 POTEBQ6S5H4 581 aa14.63□□□□□ -0.07
CPNE3-205ENST00000522240 METTL7BQ6UX53 244 aa14.63□□□□□ -0.07
CPNE3-205ENST00000522240 EEPD1Q7L9B9 569 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms