RNA–Protein interactions for RNA: ENST00000521399.5

SNHG6-205, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 302 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-205ENST00000521399 YME1L1Q96TA2 773 aa23.37■■□□□ 1.33
SNHG6-205ENST00000521399 MYO7AQ13402 2215 aa23.36■■□□□ 1.33
SNHG6-205ENST00000521399 UPP2O95045 317 aa23.36■■□□□ 1.33
SNHG6-205ENST00000521399 PLEKHA8P1O95397 391 aa23.36■■□□□ 1.33
SNHG6-205ENST00000521399 MCM5P33992 734 aa23.36■■□□□ 1.33
SNHG6-205ENST00000521399 NFXL1Q6ZNB6 911 aa23.36■■□□□ 1.33
SNHG6-205ENST00000521399 GPRASP2Q96D09 838 aa23.36■■□□□ 1.33
SNHG6-205ENST00000521399 MRPL38Q96DV4 380 aaKnown RBP23.36■■□□□ 1.33
SNHG6-205ENST00000521399 PSTPIP2Q9H939 334 aa23.36■■□□□ 1.33
SNHG6-205ENST00000521399 SH2B2O14492 632 aaPredicted RBP23.35■■□□□ 1.33
SNHG6-205ENST00000521399 ATP9AO75110 1047 aa23.35■■□□□ 1.33
SNHG6-205ENST00000521399 KCNA2P16389 499 aa23.35■■□□□ 1.33
SNHG6-205ENST00000521399 TCF7P36402 384 aaPredicted RBP23.35■■□□□ 1.33
SNHG6-205ENST00000521399 PTPROQ16827 1216 aa23.35■■□□□ 1.33
SNHG6-205ENST00000521399 LEXMQ3ZCV2 418 aa23.35■■□□□ 1.33
SNHG6-205ENST00000521399 CDHR1Q96JP9 859 aa23.35■■□□□ 1.33
SNHG6-205ENST00000521399 TMEM87BQ96K49 555 aa23.35■■□□□ 1.33
SNHG6-205ENST00000521399 IFIH1Q9BYX4 1025 aaKnown RBP23.35■■□□□ 1.33
SNHG6-205ENST00000521399 COL4A6Q14031 1691 aa23.35■■□□□ 1.33
SNHG6-205ENST00000521399 NLRC5Q86WI3 1866 aa23.34■■□□□ 1.33
SNHG6-205ENST00000521399 CCDC69A6NI79 296 aa23.34■■□□□ 1.33
SNHG6-205ENST00000521399 CHRNA1P02708 482 aa23.34■■□□□ 1.33
SNHG6-205ENST00000521399 RPAINQ86UA6 219 aa23.34■■□□□ 1.33
SNHG6-205ENST00000521399 CMTR1Q8N1G2 835 aaKnown RBP23.34■■□□□ 1.33
SNHG6-205ENST00000521399 H3BNC9 293 aa23.33■■□□□ 1.33
SNHG6-205ENST00000521399 CALM1P0DP23 149 aa23.33■■□□□ 1.33
SNHG6-205ENST00000521399 CALM2P0DP24 149 aa23.33■■□□□ 1.33
SNHG6-205ENST00000521399 CALM3P0DP25 149 aa23.33■■□□□ 1.33
SNHG6-205ENST00000521399 ITGB5P18084 799 aa23.33■■□□□ 1.33
SNHG6-205ENST00000521399 RXRAP19793 462 aa23.33■■□□□ 1.33
SNHG6-205ENST00000521399 KCNA5P22460 613 aa23.33■■□□□ 1.33
SNHG6-205ENST00000521399 LIFRP42702 1097 aa23.33■■□□□ 1.33
SNHG6-205ENST00000521399 COL9A3Q14050 684 aaPredicted RBP23.33■■□□□ 1.33
SNHG6-205ENST00000521399 TAF2Q6P1X5 1199 aa23.33■■□□□ 1.33
SNHG6-205ENST00000521399 RUFY4Q6ZNE9 571 aa23.33■■□□□ 1.33
SNHG6-205ENST00000521399 TMEM192Q8IY95 271 aa23.33■■□□□ 1.33
SNHG6-205ENST00000521399 SEPT1Q8WYJ6 367 aa23.33■■□□□ 1.33
SNHG6-205ENST00000521399 LSG1Q9H089 658 aaKnown RBP23.33■■□□□ 1.33
SNHG6-205ENST00000521399 GSTTP1A0A1W2PQM5 241 aa23.32■■□□□ 1.32
SNHG6-205ENST00000521399 GPM6BQ13491 265 aa23.32■■□□□ 1.32
SNHG6-205ENST00000521399 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.32■■□□□ 1.32
SNHG6-205ENST00000521399 KHSRPQ92945 711 aaKnown RBP eCLIP23.32■■□□□ 1.321e-11■■■□□ 18.1
SNHG6-205ENST00000521399 LRFN3Q9BTN0 628 aa23.32■■□□□ 1.32
SNHG6-205ENST00000521399 EHMT1Q9H9B1 1298 aa23.32■■□□□ 1.32
SNHG6-205ENST00000521399 CD320Q9NPF0 282 aa23.32■■□□□ 1.32
SNHG6-205ENST00000521399 UBIAD1Q9Y5Z9 338 aa23.32■■□□□ 1.32
SNHG6-205ENST00000521399 RALGAPA2Q2PPJ7 1873 aa23.32■■□□□ 1.32
SNHG6-205ENST00000521399 SLC27A2O14975 620 aa23.31■■□□□ 1.32
SNHG6-205ENST00000521399 PPFIA1Q13136 1202 aa23.31■■□□□ 1.32
SNHG6-205ENST00000521399 UBE2SQ16763 222 aa23.31■■□□□ 1.32
SNHG6-205ENST00000521399 TIGD5Q53EQ6 642 aa23.31■■□□□ 1.32
SNHG6-205ENST00000521399 ERAP1Q9NZ08 941 aa23.31■■□□□ 1.32
SNHG6-205ENST00000521399 hCG_1642624A0A1W2PR95 340 aa23.3■■□□□ 1.32
SNHG6-205ENST00000521399 SPDYE3A6NKU9 549 aa23.3■■□□□ 1.32
SNHG6-205ENST00000521399 GHRP10912 638 aa23.3■■□□□ 1.32
SNHG6-205ENST00000521399 MARK3P27448 753 aa23.3■■□□□ 1.32
SNHG6-205ENST00000521399 IRX6P78412 446 aaPredicted RBP23.3■■□□□ 1.32
SNHG6-205ENST00000521399 MGAT3Q09327 533 aa23.3■■□□□ 1.32
SNHG6-205ENST00000521399 MTMR1Q13613 665 aa23.3■■□□□ 1.32
SNHG6-205ENST00000521399 GRIK4Q16099 956 aa23.3■■□□□ 1.32
SNHG6-205ENST00000521399 RSPH3Q86UC2 560 aa23.3■■□□□ 1.32
SNHG6-205ENST00000521399 CCDC82Q8N4S0 544 aa23.3■■□□□ 1.32
SNHG6-205ENST00000521399 BANK1Q8NDB2 785 aa23.3■■□□□ 1.32
SNHG6-205ENST00000521399 IL17RAQ96F46 866 aa23.3■■□□□ 1.32
SNHG6-205ENST00000521399 TUBE1Q9UJT0 475 aa23.3■■□□□ 1.32
SNHG6-205ENST00000521399 SLC12A7Q9Y666 1083 aa23.3■■□□□ 1.32
SNHG6-205ENST00000521399 MBLAC1A4D2B0 266 aaPredicted RBP23.29■■□□□ 1.32
SNHG6-205ENST00000521399 MAFGO15525 162 aa23.29■■□□□ 1.32
SNHG6-205ENST00000521399 PLA2G5P39877 138 aa23.29■■□□□ 1.32
SNHG6-205ENST00000521399 TTC3P53804 2025 aa23.29■■□□□ 1.32
SNHG6-205ENST00000521399 TMEM31Q5JXX7 168 aa23.29■■□□□ 1.32
SNHG6-205ENST00000521399 TMTC3Q6ZXV5 915 aa23.29■■□□□ 1.32
SNHG6-205ENST00000521399 RAB11FIP4Q86YS3 637 aa23.29■■□□□ 1.32
SNHG6-205ENST00000521399 FAM178BQ8IXR5 827 aa23.29■■□□□ 1.32
SNHG6-205ENST00000521399 FIBCD1Q8N539 461 aa23.29■■□□□ 1.32
SNHG6-205ENST00000521399 FANCBQ8NB91 859 aa23.29■■□□□ 1.32
SNHG6-205ENST00000521399 NEK9Q8TD19 979 aa23.29■■□□□ 1.32
SNHG6-205ENST00000521399 GLG1Q92896 1179 aa23.29■■□□□ 1.32
SNHG6-205ENST00000521399 SMARCAD1Q9H4L7 1026 aa23.29■■□□□ 1.32
SNHG6-205ENST00000521399 JADE2Q9NQC1 790 aa23.29■■□□□ 1.32
SNHG6-205ENST00000521399 PKD2L1Q9P0L9 805 aa23.29■■□□□ 1.32
SNHG6-205ENST00000521399 PCDHA6Q9UN73 950 aa23.29■■□□□ 1.32
SNHG6-205ENST00000521399 PCDHA8Q9Y5H6 950 aa23.29■■□□□ 1.32
SNHG6-205ENST00000521399 IL9P15248 144 aa23.28■■□□□ 1.32
SNHG6-205ENST00000521399 LPIN1Q14693 890 aa23.28■■□□□ 1.32
SNHG6-205ENST00000521399 NECTIN1Q15223 517 aa23.28■■□□□ 1.32
SNHG6-205ENST00000521399 MARCH8Q5T0T0 291 aa23.28■■□□□ 1.32
SNHG6-205ENST00000521399 CREB3L3Q68CJ9 461 aa23.28■■□□□ 1.32
SNHG6-205ENST00000521399 PTCRAQ6ISU1 281 aaPredicted RBP23.28■■□□□ 1.32
SNHG6-205ENST00000521399 DNAJB3Q8WWF6 145 aa23.28■■□□□ 1.32
SNHG6-205ENST00000521399 ESYT1Q9BSJ8 1104 aa23.28■■□□□ 1.32
SNHG6-205ENST00000521399 LRRC2Q9BYS8 371 aa23.28■■□□□ 1.32
SNHG6-205ENST00000521399 GRXCR2A6NFK2 248 aa23.27■■□□□ 1.32
SNHG6-205ENST00000521399 PI4K2BG5E9Z4 385 aa23.27■■□□□ 1.32
SNHG6-205ENST00000521399 GPR37L1O60883 481 aa23.27■■□□□ 1.32
SNHG6-205ENST00000521399 PUS10Q3MIT2 529 aaKnown RBP23.27■■□□□ 1.32
SNHG6-205ENST00000521399 TCEAL5Q5H9L2 206 aa23.27■■□□□ 1.32
SNHG6-205ENST00000521399 HEATR3Q7Z4Q2 680 aa23.27■■□□□ 1.32
SNHG6-205ENST00000521399 SGMS1Q86VZ5 419 aa23.27■■□□□ 1.32
SNHG6-205ENST00000521399 GJD3Q8N144 294 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms