RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 FBXO11Q86XK2 927 aa10.79□□□□□ -0.68
CTNNA1-221ENST00000520339 RPUSD2Q8IZ73 545 aaKnown RBP10.79□□□□□ -0.68
CTNNA1-221ENST00000520339 NSUN6Q8TEA1 469 aaKnown RBP10.79□□□□□ -0.68
CTNNA1-221ENST00000520339 IWS1Q96ST2 819 aa10.79□□□□□ -0.68
CTNNA1-221ENST00000520339 RMDN3Q96TC7 470 aa10.79□□□□□ -0.68
CTNNA1-221ENST00000520339 DOLKQ9UPQ8 538 aa10.79□□□□□ -0.68
CTNNA1-221ENST00000520339 MYH4Q9Y623 1939 aa10.79□□□□□ -0.68
CTNNA1-221ENST00000520339 RAD50Q92878 1312 aa10.79□□□□□ -0.68
CTNNA1-221ENST00000520339 CUL9Q8IWT3 2517 aa10.79□□□□□ -0.68
CTNNA1-221ENST00000520339 PLXNA1Q9UIW2 1896 aa10.78□□□□□ -0.68
CTNNA1-221ENST00000520339 KLRF2D3W0D1 207 aa10.78□□□□□ -0.68
CTNNA1-221ENST00000520339 OPLAHO14841 1288 aa10.78□□□□□ -0.68
CTNNA1-221ENST00000520339 PPP1R11O60927 126 aaPredicted RBP10.78□□□□□ -0.68
CTNNA1-221ENST00000520339 CYP21A2P08686 494 aa10.78□□□□□ -0.68
CTNNA1-221ENST00000520339 GHRHRQ02643 423 aa10.78□□□□□ -0.68
CTNNA1-221ENST00000520339 PTPN11Q06124 597 aaPredicted RBP10.78□□□□□ -0.68
CTNNA1-221ENST00000520339 ARHGAP1Q07960 439 aa10.78□□□□□ -0.68
CTNNA1-221ENST00000520339 CRTC2Q53ET0 693 aaPredicted RBP10.78□□□□□ -0.68
CTNNA1-221ENST00000520339 NFRKBQ6P4R8 1299 aa10.78□□□□□ -0.68
CTNNA1-221ENST00000520339 TRAF7Q6Q0C0 670 aa10.78□□□□□ -0.68
CTNNA1-221ENST00000520339 OTOP2Q7RTS6 562 aa10.78□□□□□ -0.68
CTNNA1-221ENST00000520339 STK32AQ8WU08 396 aa10.78□□□□□ -0.68
CTNNA1-221ENST00000520339 AFG1LQ8WV93 481 aa10.78□□□□□ -0.68
CTNNA1-221ENST00000520339 SCLYQ96I15 445 aa10.78□□□□□ -0.68
CTNNA1-221ENST00000520339 AMNQ9BXJ7 453 aa10.78□□□□□ -0.68
CTNNA1-221ENST00000520339 COL25A1Q9BXS0 654 aaPredicted RBP10.78□□□□□ -0.68
CTNNA1-221ENST00000520339 MTIF3Q9H2K0 278 aaKnown RBP10.78□□□□□ -0.68
CTNNA1-221ENST00000520339 MAD2L2Q9UI95 211 aa10.78□□□□□ -0.68
CTNNA1-221ENST00000520339 ZMIZ1Q9ULJ6 1067 aa10.78□□□□□ -0.68
CTNNA1-221ENST00000520339 TAF6LQ9Y6J9 622 aa10.78□□□□□ -0.68
CTNNA1-221ENST00000520339 DHX16O60231 1041 aaKnown RBP10.77□□□□□ -0.69
CTNNA1-221ENST00000520339 EIF3JO75822 258 aaKnown RBP10.77□□□□□ -0.69
CTNNA1-221ENST00000520339 GH1P01241 217 aa10.77□□□□□ -0.69
CTNNA1-221ENST00000520339 NR3C2P08235 984 aa10.77□□□□□ -0.69
CTNNA1-221ENST00000520339 HSD17B4P51659 736 aa10.77□□□□□ -0.69
CTNNA1-221ENST00000520339 TRDNQ13061 729 aa10.77□□□□□ -0.69
CTNNA1-221ENST00000520339 RAB30Q15771 203 aa10.77□□□□□ -0.69
CTNNA1-221ENST00000520339 STXBP2Q15833 593 aa10.77□□□□□ -0.69
CTNNA1-221ENST00000520339 LY6KQ17RY6 165 aa10.77□□□□□ -0.69
CTNNA1-221ENST00000520339 OXLD1Q5BKU9 147 aa10.77□□□□□ -0.69
CTNNA1-221ENST00000520339 PLA2G2CQ5R387 149 aa10.77□□□□□ -0.69
CTNNA1-221ENST00000520339 RNF20Q5VTR2 975 aa10.77□□□□□ -0.69
CTNNA1-221ENST00000520339 ARHGEF16Q5VV41 709 aa10.77□□□□□ -0.69
CTNNA1-221ENST00000520339 SEPT14Q6ZU15 432 aa10.77□□□□□ -0.69
CTNNA1-221ENST00000520339 PPP1R13LQ8WUF5 828 aa10.77□□□□□ -0.69
CTNNA1-221ENST00000520339 RUFY2Q8WXA3 655 aa10.77□□□□□ -0.69
CTNNA1-221ENST00000520339 KAT2BQ92831 832 aa10.77□□□□□ -0.69
CTNNA1-221ENST00000520339 C1QTNF2Q9BXJ5 285 aa10.77□□□□□ -0.69
CTNNA1-221ENST00000520339 GZF1Q9H116 711 aaPredicted RBP10.77□□□□□ -0.69
CTNNA1-221ENST00000520339 RIOX1Q9H6W3 641 aa10.77□□□□□ -0.69
CTNNA1-221ENST00000520339 SENP2Q9HC62 589 aa10.77□□□□□ -0.69
CTNNA1-221ENST00000520339 DDX41Q9UJV9 622 aaKnown RBP10.77□□□□□ -0.69
CTNNA1-221ENST00000520339 ZBTB5O15062 677 aa10.76□□□□□ -0.69
CTNNA1-221ENST00000520339 SGSM2O43147 1006 aa10.76□□□□□ -0.69
CTNNA1-221ENST00000520339 CFBP00751 764 aa10.76□□□□□ -0.69
CTNNA1-221ENST00000520339 PFKMP08237 780 aa10.76□□□□□ -0.69
CTNNA1-221ENST00000520339 MMP3P08254 477 aa10.76□□□□□ -0.69
CTNNA1-221ENST00000520339 EIF2AK2P19525 551 aaKnown RBP10.76□□□□□ -0.69
CTNNA1-221ENST00000520339 GRM4Q14833 912 aa10.76□□□□□ -0.69
CTNNA1-221ENST00000520339 FAM47CQ5HY64 1035 aa10.76□□□□□ -0.69
CTNNA1-221ENST00000520339 TMEM164Q5U3C3 297 aa10.76□□□□□ -0.69
CTNNA1-221ENST00000520339 STOX1Q6ZVD7 989 aa10.76□□□□□ -0.69
CTNNA1-221ENST00000520339 SESTD1Q86VW0 696 aa10.76□□□□□ -0.69
CTNNA1-221ENST00000520339 SAMD3Q8N6K7 520 aa10.76□□□□□ -0.69
CTNNA1-221ENST00000520339 EMID1Q96A84 441 aaPredicted RBP10.76□□□□□ -0.69
CTNNA1-221ENST00000520339 CTAGE1Q96RT6 745 aa10.76□□□□□ -0.69
CTNNA1-221ENST00000520339 PXMP2Q9NR77 195 aa10.76□□□□□ -0.69
CTNNA1-221ENST00000520339 MAP3K20Q9NYL2 800 aaKnown RBP10.76□□□□□ -0.69
CTNNA1-221ENST00000520339 MSRAQ9UJ68 235 aa10.76□□□□□ -0.69
CTNNA1-221ENST00000520339 YBX2Q9Y2T7 364 aaKnown RBP10.76□□□□□ -0.69
CTNNA1-221ENST00000520339 PCDHA1Q9Y5I3 950 aa10.76□□□□□ -0.69
CTNNA1-221ENST00000520339 A0A0C4DFX4 3053 aa10.76□□□□□ -0.69
CTNNA1-221ENST00000520339 MCM3APO60318 1980 aa10.76□□□□□ -0.69
CTNNA1-221ENST00000520339 E7EWF7 191 aa10.75□□□□□ -0.69
CTNNA1-221ENST00000520339 IFIT3O14879 490 aaKnown RBP10.75□□□□□ -0.69
CTNNA1-221ENST00000520339 CYTH3O43739 400 aa10.75□□□□□ -0.69
CTNNA1-221ENST00000520339 RGS20O76081 388 aa10.75□□□□□ -0.69
CTNNA1-221ENST00000520339 IQCF3P0C7M6 154 aa10.75□□□□□ -0.69
CTNNA1-221ENST00000520339 CASTP20810 708 aaKnown RBP10.75□□□□□ -0.69
CTNNA1-221ENST00000520339 RFC2P35250 354 aa10.75□□□□□ -0.69
CTNNA1-221ENST00000520339 RABGGTBP53611 331 aa10.75□□□□□ -0.69
CTNNA1-221ENST00000520339 IRX6P78412 446 aaPredicted RBP10.75□□□□□ -0.69
CTNNA1-221ENST00000520339 TROAPQ12815 778 aa10.75□□□□□ -0.69
CTNNA1-221ENST00000520339 PTK7Q13308 1070 aa10.75□□□□□ -0.69
CTNNA1-221ENST00000520339 ADGRE1Q14246 886 aa10.75□□□□□ -0.69
CTNNA1-221ENST00000520339 VSIG10LQ86VR7 867 aa10.75□□□□□ -0.69
CTNNA1-221ENST00000520339 USP38Q8NB14 1042 aa10.75□□□□□ -0.69
CTNNA1-221ENST00000520339 MAP4K1Q92918 833 aa10.75□□□□□ -0.69
CTNNA1-221ENST00000520339 PDCD2LQ9BRP1 358 aa10.75□□□□□ -0.69
CTNNA1-221ENST00000520339 NKX2-4Q9H2Z4 354 aa10.75□□□□□ -0.69
CTNNA1-221ENST00000520339 PRDM12Q9H4Q4 367 aa10.75□□□□□ -0.69
CTNNA1-221ENST00000520339 NOD1Q9Y239 953 aa10.75□□□□□ -0.69
CTNNA1-221ENST00000520339 SLC4A7Q9Y6M7 1214 aa10.75□□□□□ -0.69
CTNNA1-221ENST00000520339 HOXD8P13378 290 aaPredicted RBP10.74□□□□□ -0.69
CTNNA1-221ENST00000520339 ATP2A2P16615 1042 aaKnown RBP10.74□□□□□ -0.69
CTNNA1-221ENST00000520339 HOXA13P31271 388 aaPredicted RBP10.74□□□□□ -0.69
CTNNA1-221ENST00000520339 ANTXR2P58335 489 aa10.74□□□□□ -0.69
CTNNA1-221ENST00000520339 KCNA1Q09470 495 aa10.74□□□□□ -0.69
CTNNA1-221ENST00000520339 LAMC2Q13753 1193 aa10.74□□□□□ -0.69
CTNNA1-221ENST00000520339 GPNMBQ14956 572 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms