RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 TNFRSF10BO14763 440 aa9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 PRPF3O43395 683 aaKnown RBP9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 TTLL1O95922 423 aa9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 SNHG28P0DPA3 235 aa9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 EEF2P13639 858 aaKnown RBP9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 MLLT1Q03111 559 aaPredicted RBP9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 SSRP1Q08945 709 aaKnown RBP9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 TNFAIP1Q13829 316 aa9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 PKN1Q16512 942 aa9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 ANGEL2Q5VTE6 544 aaKnown RBP9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 TMEM179Q6ZVK1 233 aa9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 MIGA2Q7L4E1 593 aa9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 RASGRP2Q7LDG7 609 aa9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 HOMEZQ8IX15 550 aa9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 FBXO18Q8NFZ0 1043 aa9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 CTCFLQ8NI51 663 aaPredicted RBP9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 MKNK1Q9BUB5 465 aa9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 SLC26A6Q9BXS9 759 aa9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 SMG9Q9H0W8 520 aaKnown RBP9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 RBSNQ9H1K0 784 aa9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 KANSL2Q9H9L4 492 aa9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 ADARB2Q9NS39 739 aaKnown RBP9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 GJB4Q9NTQ9 266 aa9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 NYAP2Q9P242 653 aa9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 CLIP2Q9UDT6 1046 aa9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 WDR90Q96KV7 1748 aa9.08□□□□□ -0.96
CTHRC1-203ENST00000520337 VPS37CA5D8V6 355 aaPredicted RBP9.07□□□□□ -0.96
CTHRC1-203ENST00000520337 MMP20O60882 483 aa9.07□□□□□ -0.96
CTHRC1-203ENST00000520337 GH2P01242 217 aa9.07□□□□□ -0.96
CTHRC1-203ENST00000520337 PDHBP11177 359 aa9.07□□□□□ -0.96
CTHRC1-203ENST00000520337 EIF2AK2P19525 551 aaKnown RBP9.07□□□□□ -0.96
CTHRC1-203ENST00000520337 KIF5BP33176 963 aa9.07□□□□□ -0.96
CTHRC1-203ENST00000520337 GUCY1B3Q02153 619 aa9.07□□□□□ -0.96
CTHRC1-203ENST00000520337 RESTQ13127 1097 aa9.07□□□□□ -0.96
CTHRC1-203ENST00000520337 NBPF12Q5TAG4 269 aaPredicted RBP9.07□□□□□ -0.96
CTHRC1-203ENST00000520337 OTUD7BQ6GQQ9 843 aa9.07□□□□□ -0.96
CTHRC1-203ENST00000520337 FBXO11Q86XK2 927 aa9.07□□□□□ -0.96
CTHRC1-203ENST00000520337 APOBEC3FQ8IUX4 373 aaKnown RBP9.07□□□□□ -0.96
CTHRC1-203ENST00000520337 LRRC47Q8N1G4 583 aaKnown RBP9.07□□□□□ -0.96
CTHRC1-203ENST00000520337 SHISA4Q96DD7 197 aa9.07□□□□□ -0.96
CTHRC1-203ENST00000520337 C8orf76Q96K31 380 aa9.07□□□□□ -0.96
CTHRC1-203ENST00000520337 GBP4Q96PP9 640 aa9.07□□□□□ -0.96
CTHRC1-203ENST00000520337 ALG1Q9BT22 464 aa9.07□□□□□ -0.96
CTHRC1-203ENST00000520337 RNF26Q9BY78 433 aaPredicted RBP9.07□□□□□ -0.96
CTHRC1-203ENST00000520337 STIM2Q9P246 746 aa9.07□□□□□ -0.96
CTHRC1-203ENST00000520337 FNDC3AQ9Y2H6 1198 aaKnown RBP9.07□□□□□ -0.96
CTHRC1-203ENST00000520337 KIF3AQ9Y496 699 aa9.07□□□□□ -0.96
CTHRC1-203ENST00000520337 SRCAPQ6ZRS2 3230 aa9.07□□□□□ -0.96
CTHRC1-203ENST00000520337 PAPPA2Q9BXP8 1791 aa9.07□□□□□ -0.96
CTHRC1-203ENST00000520337 PITPNM2Q9BZ72 1349 aa9.06□□□□□ -0.96
CTHRC1-203ENST00000520337 GLTPD2A6NH11 291 aa9.06□□□□□ -0.96
CTHRC1-203ENST00000520337 H3BQV1 296 aa9.06□□□□□ -0.96
CTHRC1-203ENST00000520337 CYTH3O43739 400 aa9.06□□□□□ -0.96
CTHRC1-203ENST00000520337 DEXIO95424 95 aa9.06□□□□□ -0.96
CTHRC1-203ENST00000520337 GHRHP01286 108 aa9.06□□□□□ -0.96
CTHRC1-203ENST00000520337 PARP1P09874 1014 aaKnown RBP9.06□□□□□ -0.96
CTHRC1-203ENST00000520337 GOLGA8HP0CJ92 632 aa9.06□□□□□ -0.96
CTHRC1-203ENST00000520337 VEGFAP15692 232 aaPredicted RBP9.06□□□□□ -0.96
CTHRC1-203ENST00000520337 SMARCA1P28370 1054 aa9.06□□□□□ -0.96
CTHRC1-203ENST00000520337 CAP2P40123 477 aa9.06□□□□□ -0.96
CTHRC1-203ENST00000520337 GNAQP50148 359 aa9.06□□□□□ -0.96
CTHRC1-203ENST00000520337 PRAMEF18Q5VWM3 479 aa9.06□□□□□ -0.96
CTHRC1-203ENST00000520337 FERMT3Q86UX7 667 aa9.06□□□□□ -0.96
CTHRC1-203ENST00000520337 LZTS2Q9BRK4 669 aa9.06□□□□□ -0.96
CTHRC1-203ENST00000520337 GGA3Q9NZ52 723 aa9.06□□□□□ -0.96
CTHRC1-203ENST00000520337 ZBTB21Q9ULJ3 1066 aa9.06□□□□□ -0.96
CTHRC1-203ENST00000520337 UTRNP46939 3433 aa9.06□□□□□ -0.96
CTHRC1-203ENST00000520337 PARP14Q460N5 1801 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 OTOFQ9HC10 1997 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 SSC5DA1L4H1 1573 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 hCG_1642624A0A1W2PR95 340 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 A0A1W2PRG0 241 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 KLRF2D3W0D1 207 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 ICA1Q05084 483 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 ZNF543Q08ER8 600 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 NAA30Q147X3 362 aaPredicted RBP9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 TRIP4Q15650 581 aaPredicted RBP9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 ASPRV1Q53RT3 343 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 KRT40Q6A162 431 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 FAM173BQ6P4H8 233 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 CAPN12Q6ZSI9 719 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 HFE2Q6ZVN8 426 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 CACTIN-AS1Q8N1I8 211 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 GMCL1P1Q8NEA9 526 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 WASF1Q92558 559 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 PLD4Q96BZ4 506 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 SPZ1Q9BXG8 430 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 CPVLQ9H3G5 476 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 SRA1Q9HD15 236 aaKnown RBP9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 CABP5Q9NP86 173 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 ZNF112Q9UJU3 913 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 SYNPO2Q9UMS6 1093 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 MTMR7Q9Y216 660 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 PPP2R3BQ9Y5P8 575 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 PTPRFP10586 1907 aa9.05□□□□□ -0.96
CTHRC1-203ENST00000520337 KIF28PB7ZC32 967 aa9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 F5H6K3 240 aa9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 CTNND1O60716 968 aaKnown RBP9.04□□□□□ -0.96
CTHRC1-203ENST00000520337 EPHX2P34913 555 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms