RNA–Protein interactions for RNA: ENST00000520119.1

IGHV1-17-201, Transcript of immunoglobulin heavy variable 1-17 (pseudogene), humanhuman

BASIC

Gene IGHV1-17, Length 334 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV1-17-201ENST00000520119 GPKOWQ92917 476 aaPredicted RBP eCLIP12.72□□□□□ -0.37
IGHV1-17-201ENST00000520119 CUL5Q93034 780 aa12.72□□□□□ -0.37
IGHV1-17-201ENST00000520119 TMEM87BQ96K49 555 aa12.72□□□□□ -0.37
IGHV1-17-201ENST00000520119 ASB2Q96Q27 587 aa12.72□□□□□ -0.37
IGHV1-17-201ENST00000520119 USP26Q9BXU7 913 aa12.72□□□□□ -0.37
IGHV1-17-201ENST00000520119 TUT1Q9H6E5 874 aaKnown RBP12.72□□□□□ -0.37
IGHV1-17-201ENST00000520119 SEC63Q9UGP8 760 aaKnown RBP12.72□□□□□ -0.37
IGHV1-17-201ENST00000520119 REV3LO60673 3130 aa12.71□□□□□ -0.37
IGHV1-17-201ENST00000520119 XIRP2A4UGR9 3374 aa12.71□□□□□ -0.37
IGHV1-17-201ENST00000520119 EMSYQ7Z589 1322 aa12.71□□□□□ -0.37
IGHV1-17-201ENST00000520119 CCDC69A6NI79 296 aa12.71□□□□□ -0.37
IGHV1-17-201ENST00000520119 SPATA31C2B4DYI2 1134 aa12.71□□□□□ -0.37
IGHV1-17-201ENST00000520119 PIK3CDO00329 1044 aa12.71□□□□□ -0.37
IGHV1-17-201ENST00000520119 FIBPO43427 364 aa12.71□□□□□ -0.37
IGHV1-17-201ENST00000520119 CALM1P0DP23 149 aa12.71□□□□□ -0.37
IGHV1-17-201ENST00000520119 CALM2P0DP24 149 aa12.71□□□□□ -0.37
IGHV1-17-201ENST00000520119 CALM3P0DP25 149 aa12.71□□□□□ -0.37
IGHV1-17-201ENST00000520119 LIFRP42702 1097 aa12.71□□□□□ -0.37
IGHV1-17-201ENST00000520119 ZNF200P98182 395 aaPredicted RBP12.71□□□□□ -0.37
IGHV1-17-201ENST00000520119 IKBKEQ14164 716 aa12.71□□□□□ -0.37
IGHV1-17-201ENST00000520119 ZNF618Q5T7W0 954 aa12.71□□□□□ -0.37
IGHV1-17-201ENST00000520119 PCNX4Q63HM2 1172 aa12.71□□□□□ -0.37
IGHV1-17-201ENST00000520119 TRAF7Q6Q0C0 670 aa12.71□□□□□ -0.37
IGHV1-17-201ENST00000520119 NFXL1Q6ZNB6 911 aa12.71□□□□□ -0.37
IGHV1-17-201ENST00000520119 SERINC5Q86VE9 423 aa12.71□□□□□ -0.37
IGHV1-17-201ENST00000520119 SMARCC2Q8TAQ2 1214 aa12.71□□□□□ -0.37
IGHV1-17-201ENST00000520119 ZBED2Q9BTP6 218 aa12.71□□□□□ -0.37
IGHV1-17-201ENST00000520119 MYL10Q9BUA6 226 aa12.71□□□□□ -0.37
IGHV1-17-201ENST00000520119 LSG1Q9H089 658 aaKnown RBP12.71□□□□□ -0.37
IGHV1-17-201ENST00000520119 CDHR5Q9HBB8 845 aa12.71□□□□□ -0.37
IGHV1-17-201ENST00000520119 C17orf102A2RUQ5 167 aa12.7□□□□□ -0.38
IGHV1-17-201ENST00000520119 SH2B2O14492 632 aaPredicted RBP12.7□□□□□ -0.38
IGHV1-17-201ENST00000520119 MEIS2O14770 477 aa12.7□□□□□ -0.38
IGHV1-17-201ENST00000520119 SLC27A2O14975 620 aa12.7□□□□□ -0.38
IGHV1-17-201ENST00000520119 LGALS2P05162 132 aa12.7□□□□□ -0.38
IGHV1-17-201ENST00000520119 HOXC8P31273 242 aa12.7□□□□□ -0.38
IGHV1-17-201ENST00000520119 TSR1Q2NL82 804 aaKnown RBP12.7□□□□□ -0.38
IGHV1-17-201ENST00000520119 USP17L6PQ6QN14 398 aa12.7□□□□□ -0.38
IGHV1-17-201ENST00000520119 CYFIP1Q7L576 1253 aa12.7□□□□□ -0.38
IGHV1-17-201ENST00000520119 MICALL1Q8N3F8 863 aa12.7□□□□□ -0.38
IGHV1-17-201ENST00000520119 KRI1Q8N9T8 703 aaKnown RBP12.7□□□□□ -0.38
IGHV1-17-201ENST00000520119 IL27Q8NEV9 243 aa12.7□□□□□ -0.38
IGHV1-17-201ENST00000520119 ARNTL2Q8WYA1 636 aa12.7□□□□□ -0.38
IGHV1-17-201ENST00000520119 ATP6V0A1Q93050 837 aa12.7□□□□□ -0.38
IGHV1-17-201ENST00000520119 WNT8BQ93098 351 aa12.7□□□□□ -0.38
IGHV1-17-201ENST00000520119 ZDHHC16Q969W1 377 aa12.7□□□□□ -0.38
IGHV1-17-201ENST00000520119 SENP7Q9BQF6 1050 aa12.7□□□□□ -0.38
IGHV1-17-201ENST00000520119 ESYT1Q9BSJ8 1104 aa12.7□□□□□ -0.38
IGHV1-17-201ENST00000520119 CERS4Q9HA82 394 aa12.7□□□□□ -0.38
IGHV1-17-201ENST00000520119 RTEL1Q9NZ71 1219 aa12.7□□□□□ -0.38
IGHV1-17-201ENST00000520119 MTCH2Q9Y6C9 303 aa12.7□□□□□ -0.38
IGHV1-17-201ENST00000520119 PTPRSQ13332 1948 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 RSPH10B2B2RC85 870 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 TNFRSF10AO00220 468 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 RFXAPO00287 272 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 CAND2O75155 1236 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 LGR5O75473 907 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 GJB5O95377 273 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 PLEKHA8P1O95397 391 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 RSPH10BP0C881 870 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 SMIM10L2AP0DMW4 78 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 SMIM10L2BP0DMW5 78 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 GNAT1P11488 350 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 THPOP40225 353 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 DEFB103AP81534 67 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 PTGDRQ13258 359 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 SEMA3FQ13275 785 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 HIC1Q14526 733 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 MBTPS1Q14703 1052 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 NECTIN1Q15223 517 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 AAK1Q2M2I8 961 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 NLRX1Q86UT6 975 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 SRBD1Q8N5C6 995 aaKnown RBP12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 GIMAP8Q8ND71 665 aaPredicted RBP12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 RAD9AQ99638 391 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 GPR20Q99678 358 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 RNPEPQ9H4A4 650 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 BCAS3Q9H6U6 928 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 PSTPIP2Q9H939 334 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 ZNF215Q9UL58 517 aaPredicted RBP12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 SLC12A7Q9Y666 1083 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 KAT6AQ92794 2004 aa12.69□□□□□ -0.38
IGHV1-17-201ENST00000520119 BRWD1Q9NSI6 2320 aa12.68□□□□□ -0.38
IGHV1-17-201ENST00000520119 EPOPA6NHQ4 379 aa12.68□□□□□ -0.38
IGHV1-17-201ENST00000520119 ARHGEF15O94989 841 aa12.68□□□□□ -0.38
IGHV1-17-201ENST00000520119 SKIV2LQ15477 1246 aaKnown RBP12.68□□□□□ -0.38
IGHV1-17-201ENST00000520119 TCTN1Q2MV58 587 aa12.68□□□□□ -0.38
IGHV1-17-201ENST00000520119 CREB3L3Q68CJ9 461 aa12.68□□□□□ -0.38
IGHV1-17-201ENST00000520119 GPRASP2Q96D09 838 aa12.68□□□□□ -0.38
IGHV1-17-201ENST00000520119 CDHR1Q96JP9 859 aa12.68□□□□□ -0.38
IGHV1-17-201ENST00000520119 ANO2Q9NQ90 1003 aa12.68□□□□□ -0.38
IGHV1-17-201ENST00000520119 DOCK5Q9H7D0 1870 aa12.68□□□□□ -0.38
IGHV1-17-201ENST00000520119 LCHNA4D1U4 455 aa12.67□□□□□ -0.38
IGHV1-17-201ENST00000520119 TREHO43280 583 aa12.67□□□□□ -0.38
IGHV1-17-201ENST00000520119 RXRAP19793 462 aa12.67□□□□□ -0.38
IGHV1-17-201ENST00000520119 GRB10Q13322 594 aa12.67□□□□□ -0.38
IGHV1-17-201ENST00000520119 PLEKHG4Q58EX7 1191 aa12.67□□□□□ -0.38
IGHV1-17-201ENST00000520119 BMP2KLQ5H9B9 411 aa12.67□□□□□ -0.38
IGHV1-17-201ENST00000520119 RNF20Q5VTR2 975 aa12.67□□□□□ -0.38
IGHV1-17-201ENST00000520119 TMCO2Q7Z6W1 182 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms