RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 KRT40Q6A162 431 aa12.47□□□□□ -0.41
PVT1-208ENST00000519481 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.47□□□□□ -0.41
PVT1-208ENST00000519481 TMTC3Q6ZXV5 915 aa12.47□□□□□ -0.41
PVT1-208ENST00000519481 MICU3Q86XE3 530 aa12.47□□□□□ -0.41
PVT1-208ENST00000519481 TRIM50Q86XT4 487 aa12.47□□□□□ -0.41
PVT1-208ENST00000519481 CMTR1Q8N1G2 835 aaKnown RBP12.47□□□□□ -0.41
PVT1-208ENST00000519481 GDPD5Q8WTR4 605 aa12.47□□□□□ -0.41
PVT1-208ENST00000519481 APBB2Q92870 758 aa12.47□□□□□ -0.41
PVT1-208ENST00000519481 TNPO1Q92973 898 aaKnown RBP12.47□□□□□ -0.41
PVT1-208ENST00000519481 SAMD11Q96NU1 681 aa12.47□□□□□ -0.41
PVT1-208ENST00000519481 LRRC2Q9BYS8 371 aa12.47□□□□□ -0.41
PVT1-208ENST00000519481 RBM28Q9NW13 759 aaKnown RBP12.47□□□□□ -0.41
PVT1-208ENST00000519481 TRANK1O15050 2925 aa12.46□□□□□ -0.41
PVT1-208ENST00000519481 hCG_1642624A0A1W2PR95 340 aa12.46□□□□□ -0.41
PVT1-208ENST00000519481 BMP1P13497 986 aa12.46□□□□□ -0.41
PVT1-208ENST00000519481 TCF7P36402 384 aaPredicted RBP12.46□□□□□ -0.41
PVT1-208ENST00000519481 PPFIA1Q13136 1202 aa12.46□□□□□ -0.41
PVT1-208ENST00000519481 UBE2SQ16763 222 aa12.46□□□□□ -0.41
PVT1-208ENST00000519481 BMP2KLQ5H9B9 411 aa12.46□□□□□ -0.41
PVT1-208ENST00000519481 TAF2Q6P1X5 1199 aa12.46□□□□□ -0.41
PVT1-208ENST00000519481 SGMS1Q86VZ5 419 aa12.46□□□□□ -0.41
PVT1-208ENST00000519481 RAB11FIP4Q86YS3 637 aa12.46□□□□□ -0.41
PVT1-208ENST00000519481 FBXO22Q8NEZ5 403 aa12.46□□□□□ -0.41
PVT1-208ENST00000519481 LMBR1Q8WVP7 490 aa12.46□□□□□ -0.41
PVT1-208ENST00000519481 GLG1Q92896 1179 aa12.46□□□□□ -0.41
PVT1-208ENST00000519481 NEK1Q96PY6 1258 aa12.46□□□□□ -0.41
PVT1-208ENST00000519481 YME1L1Q96TA2 773 aa12.46□□□□□ -0.41
PVT1-208ENST00000519481 SMARCAD1Q9H4L7 1026 aa12.46□□□□□ -0.41
PVT1-208ENST00000519481 SUGCTQ9HAC7 445 aa12.46□□□□□ -0.41
PVT1-208ENST00000519481 ERAP1Q9NZ08 941 aa12.46□□□□□ -0.41
PVT1-208ENST00000519481 PCDHA6Q9UN73 950 aa12.46□□□□□ -0.41
PVT1-208ENST00000519481 PCDHA8Q9Y5H6 950 aa12.46□□□□□ -0.41
PVT1-208ENST00000519481 LPXNO60711 386 aa12.45□□□□□ -0.42
PVT1-208ENST00000519481 UPP2O95045 317 aa12.45□□□□□ -0.42
PVT1-208ENST00000519481 FOSP01100 380 aaPredicted RBP12.45□□□□□ -0.42
PVT1-208ENST00000519481 RPLP2P05387 115 aaKnown RBP12.45□□□□□ -0.42
PVT1-208ENST00000519481 KCNA2P16389 499 aa12.45□□□□□ -0.42
PVT1-208ENST00000519481 NAPAP54920 295 aa12.45□□□□□ -0.42
PVT1-208ENST00000519481 KRT32Q14532 448 aa12.45□□□□□ -0.42
PVT1-208ENST00000519481 RTN1Q16799 776 aa12.45□□□□□ -0.42
PVT1-208ENST00000519481 PTPROQ16827 1216 aa12.45□□□□□ -0.42
PVT1-208ENST00000519481 FAM26DQ5JW98 314 aa12.45□□□□□ -0.42
PVT1-208ENST00000519481 CENPQQ7L2Z9 268 aaPredicted RBP12.45□□□□□ -0.42
PVT1-208ENST00000519481 SPRED2Q7Z698 418 aa12.45□□□□□ -0.42
PVT1-208ENST00000519481 TEX2Q8IWB9 1127 aa12.45□□□□□ -0.42
PVT1-208ENST00000519481 IFIH1Q9BYX4 1025 aaKnown RBP12.45□□□□□ -0.42
PVT1-208ENST00000519481 AZI2Q9H6S1 392 aa12.45□□□□□ -0.42
PVT1-208ENST00000519481 JADE2Q9NQC1 790 aa12.45□□□□□ -0.42
PVT1-208ENST00000519481 PKD2L1Q9P0L9 805 aa12.45□□□□□ -0.42
PVT1-208ENST00000519481 UBIAD1Q9Y5Z9 338 aa12.45□□□□□ -0.42
PVT1-208ENST00000519481 KAT6AQ92794 2004 aa12.44□□□□□ -0.42
PVT1-208ENST00000519481 hCG_1984214I3L0E3 225 aa12.44□□□□□ -0.42
PVT1-208ENST00000519481 ZBTB43O43298 467 aa12.44□□□□□ -0.42
PVT1-208ENST00000519481 ATP9AO75110 1047 aa12.44□□□□□ -0.42
PVT1-208ENST00000519481 ITGB5P18084 799 aa12.44□□□□□ -0.42
PVT1-208ENST00000519481 MARK3P27448 753 aa12.44□□□□□ -0.42
PVT1-208ENST00000519481 KCNQ1P51787 676 aa12.44□□□□□ -0.42
PVT1-208ENST00000519481 ADAM17P78536 824 aa12.44□□□□□ -0.42
PVT1-208ENST00000519481 HTRA4P83105 476 aaPredicted RBP12.44□□□□□ -0.42
PVT1-208ENST00000519481 FGD1P98174 961 aa12.44□□□□□ -0.42
PVT1-208ENST00000519481 PPP1R18Q6NYC8 613 aa12.44□□□□□ -0.42
PVT1-208ENST00000519481 APOA5Q6Q788 366 aa12.44□□□□□ -0.42
PVT1-208ENST00000519481 DHX32Q7L7V1 743 aaKnown RBP12.44□□□□□ -0.42
PVT1-208ENST00000519481 RPAINQ86UA6 219 aa12.44□□□□□ -0.42
PVT1-208ENST00000519481 ZNF713Q8N859 430 aaPredicted RBP12.44□□□□□ -0.42
PVT1-208ENST00000519481 TOP1MTQ969P6 601 aa12.44□□□□□ -0.42
PVT1-208ENST00000519481 SDF4Q9BRK5 362 aa12.44□□□□□ -0.42
PVT1-208ENST00000519481 GLT8D2Q9H1C3 349 aa12.44□□□□□ -0.42
PVT1-208ENST00000519481 TUBE1Q9UJT0 475 aa12.44□□□□□ -0.42
PVT1-208ENST00000519481 PTPRSQ13332 1948 aa12.43□□□□□ -0.42
PVT1-208ENST00000519481 GSTTP1A0A1W2PQM5 241 aa12.43□□□□□ -0.42
PVT1-208ENST00000519481 RRN3P2A6NIE6 340 aa12.43□□□□□ -0.42
PVT1-208ENST00000519481 GOLGA8AA7E2F4 631 aa12.43□□□□□ -0.42
PVT1-208ENST00000519481 GOLGA8BA8MQT2 603 aa12.43□□□□□ -0.42
PVT1-208ENST00000519481 HMGB1P09429 215 aaKnown RBP12.43□□□□□ -0.42
PVT1-208ENST00000519481 ADCY7P51828 1080 aa12.43□□□□□ -0.42
PVT1-208ENST00000519481 MKRN4PQ13434 485 aaPredicted RBP12.43□□□□□ -0.42
PVT1-208ENST00000519481 GRIK4Q16099 956 aa12.43□□□□□ -0.42
PVT1-208ENST00000519481 SP7Q8TDD2 431 aaPredicted RBP12.43□□□□□ -0.42
PVT1-208ENST00000519481 NECAB3Q96P71 396 aaPredicted RBP12.43□□□□□ -0.42
PVT1-208ENST00000519481 MXRA8Q9BRK3 442 aa12.43□□□□□ -0.42
PVT1-208ENST00000519481 C17orf80Q9BSJ5 609 aa12.43□□□□□ -0.42
PVT1-208ENST00000519481 JPH1Q9HDC5 661 aaPredicted RBP12.43□□□□□ -0.42
PVT1-208ENST00000519481 RIC8AQ9NPQ8 531 aa12.43□□□□□ -0.42
PVT1-208ENST00000519481 SLC9A2Q9UBY0 812 aa12.43□□□□□ -0.42
PVT1-208ENST00000519481 NAP1L2Q9ULW6 460 aaPredicted RBP12.43□□□□□ -0.42
PVT1-208ENST00000519481 TELO2Q9Y4R8 837 aa12.43□□□□□ -0.42
PVT1-208ENST00000519481 MICAL3Q7RTP6 2002 aa12.43□□□□□ -0.42
PVT1-208ENST00000519481 BDP1A6H8Y1 2624 aa12.42□□□□□ -0.42
PVT1-208ENST00000519481 SPTBN5Q9NRC6 3674 aaKnown RBP12.42□□□□□ -0.42
PVT1-208ENST00000519481 TCF20Q9UGU0 1960 aaKnown RBP12.42□□□□□ -0.42
PVT1-208ENST00000519481 M0QZ92 97 aa12.42□□□□□ -0.42
PVT1-208ENST00000519481 CDC45O75419 566 aa12.42□□□□□ -0.42
PVT1-208ENST00000519481 GHRP10912 638 aa12.42□□□□□ -0.42
PVT1-208ENST00000519481 ZNF76P36508 570 aa12.42□□□□□ -0.42
PVT1-208ENST00000519481 IGBP1P78318 339 aa12.42□□□□□ -0.42
PVT1-208ENST00000519481 EPC2Q52LR7 807 aa12.42□□□□□ -0.42
PVT1-208ENST00000519481 IER5Q5VY09 327 aa12.42□□□□□ -0.42
PVT1-208ENST00000519481 WWC2Q6AWC2 1192 aa12.42□□□□□ -0.42
PVT1-208ENST00000519481 MRPL38Q96DV4 380 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms