RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 C9orf172C9J069 976 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 MEFVO15553 781 aaPredicted RBP5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 TSPAN6O43657 245 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 LEFTY1O75610 366 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 WFS1O76024 890 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 ARHGEF15O94989 841 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 APBA3O96018 575 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 FAM87AP0C7U9 286 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 IREB2P48200 963 aaKnown RBP5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 MCL1Q07820 350 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 SART3Q15020 963 aaKnown RBP5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 NFKBIBQ15653 356 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 NFE2Q16621 373 aaPredicted RBP5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 MTHFSDQ2M296 383 aaKnown RBP5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 KRT24Q2M2I5 525 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 ACBD5Q5T8D3 534 aaPredicted RBP5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 DENND5AQ6IQ26 1287 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 MCM10Q7L590 875 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 KSR1Q8IVT5 923 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 ITPRIPQ8IWB1 547 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 KREMEN2Q8NCW0 462 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 WFDC12Q8WWY7 111 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 WNK4Q96J92 1243 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 ZFYVE21Q9BQ24 234 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 MCMBPQ9BTE3 642 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 HDAC8Q9BY41 377 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 KCNF1Q9H3M0 494 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 C1GALT1Q9NS00 363 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 SAMD15Q9P1V8 674 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 KIAA0232Q92628 1395 aa5.92□□□□□ -1.46
CTNNA1-212ENST00000518919 DCCP43146 1447 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 LTN1O94822 1766 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 SHISA3A0PJX4 238 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 RBAK-RBAKDNI3L0D1 243 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 CHL1O00533 1208 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 NEMP1O14524 444 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 AURKAO14965 403 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 MAP4K4O95819 1239 aaPredicted RBP5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 SCGB1D2O95969 90 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 IFNGR1P15260 489 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 BPIP17213 487 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 CTSKP43235 329 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 RGS3P49796 1198 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 SCNN1BP51168 640 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 GPR85P60893 370 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 KCNAB2Q13303 367 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 SKOR2Q2VWA4 1001 aaPredicted RBP5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 TWISTNBQ3B726 338 aaPredicted RBP5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 RSPO2Q6UXX9 243 aaPredicted RBP5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 ZC3H7AQ8IWR0 971 aaKnown RBP5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 FAM20CQ8IXL6 584 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 IFNL3Q8IZI9 196 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 NPLOC4Q8TAT6 608 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 COG1Q8WTW3 980 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 FRS2Q8WU20 508 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 COPS5Q92905 334 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 ORAI2Q96SN7 254 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 ANP32EQ9BTT0 268 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 PUS7LQ9H0K6 701 aaKnown RBP5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 ZBTB40Q9NUA8 1239 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 GEMIN8Q9NWZ8 242 aaKnown RBP5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 GTF2IRD1Q9UHL9 959 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 DDX19BQ9UMR2 479 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 PCDHA8Q9Y5H6 950 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 CNTNAP4Q9C0A0 1308 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 LMO7Q8WWI1 1683 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 ALS2Q96Q42 1657 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 TMEM94Q12767 1356 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 MAP3K5Q99683 1374 aa5.91□□□□□ -1.46
CTNNA1-212ENST00000518919 PXDNQ92626 1479 aa5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 SHTN1A0MZ66 631 aa5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 C2orf71A6NGG8 1288 aa5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 ZNF891A8MT65 544 aaPredicted RBP5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 ELL2O00472 640 aaPredicted RBP5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 IPO8O15397 1037 aaKnown RBP5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 ZEB2O60315 1214 aa5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 GLRX3O76003 335 aaKnown RBP5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 LTBRP36941 435 aa5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 ANP32AP39687 249 aaKnown RBP5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 ID4P47928 161 aa5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 SEPHS1P49903 392 aa5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 IL2P60568 153 aa5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 HDAC1Q13547 482 aaPredicted RBP5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 ABHD17CQ6PCB6 329 aa5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 ZBTB46Q86UZ6 589 aa5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 CCAR1Q8IX12 1150 aaKnown RBP5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 ARMC10Q8N2F6 343 aa5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 MFSD4AQ8N468 514 aa5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 USHBP1Q8N6Y0 703 aa5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 PIWIL2Q8TC59 973 aaKnown RBP5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 IP6K1Q92551 441 aa5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 RELTQ969Z4 430 aa5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 ALG1Q9BT22 464 aa5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 GPRC5CQ9NQ84 441 aa5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 GPR27Q9NS67 375 aa5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 TRHDEQ9UKU6 1024 aa5.9□□□□□ -1.46
CTNNA1-212ENST00000518919 FAM208AQ9UK61 1670 aaKnown RBP5.9□□□□□ -1.47
CTNNA1-212ENST00000518919 VIRMAQ69YN4 1812 aaKnown RBP5.9□□□□□ -1.47
CTNNA1-212ENST00000518919 NCOA3Q9Y6Q9 1424 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms