RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 MRPS9P82933 396 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 SEMA3FQ13275 785 aa13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 SMAD4Q13485 552 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 CAMK1Q14012 370 aa13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 CYFIP1Q7L576 1253 aa13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 FCHSD1Q86WN1 690 aa13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 PRSS33Q8NF86 280 aa13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 LMBR1Q8WVP7 490 aa13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 CLP1Q92989 425 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 RILPL2Q969X0 211 aa13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 MFSD14AQ96MC6 490 aa13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 POP1Q99575 1024 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 GPR20Q99678 358 aa13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 USP26Q9BXU7 913 aa13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 LMAN2LQ9H0V9 348 aa13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 IGFLR1Q9H665 355 aa13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 ZBTB47Q9UFB7 747 aaPredicted RBP13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 CACNA1HO95180 2353 aa13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 TTC3P53804 2025 aa13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 GCOM1H8Y6P7 765 aaPredicted RBP13.16□□□□□ -0.3
CTNNA1-205ENST00000517904 POLR2MP0CAP2 368 aa13.16□□□□□ -0.3
CTNNA1-205ENST00000517904 GHRP10912 638 aa13.16□□□□□ -0.3
CTNNA1-205ENST00000517904 ICAM3P32942 547 aa13.16□□□□□ -0.3
CTNNA1-205ENST00000517904 MFAP1P55081 439 aaKnown RBP13.16□□□□□ -0.3
CTNNA1-205ENST00000517904 ARHGAP4P98171 946 aa13.16□□□□□ -0.3
CTNNA1-205ENST00000517904 CACNB1Q02641 598 aaPredicted RBP13.16□□□□□ -0.3
CTNNA1-205ENST00000517904 IER5LQ5T953 404 aa13.16□□□□□ -0.3
CTNNA1-205ENST00000517904 METTL7BQ6UX53 244 aa13.16□□□□□ -0.3
CTNNA1-205ENST00000517904 RUFY4Q6ZNE9 571 aa13.16□□□□□ -0.3
CTNNA1-205ENST00000517904 HOMER1Q86YM7 354 aa13.16□□□□□ -0.3
CTNNA1-205ENST00000517904 EDAQ92838 391 aa13.16□□□□□ -0.3
CTNNA1-205ENST00000517904 ZNF689Q96CS4 500 aaPredicted RBP13.16□□□□□ -0.3
CTNNA1-205ENST00000517904 SNX27Q96L92 541 aa13.16□□□□□ -0.3
CTNNA1-205ENST00000517904 INPP4AQ96PE3 977 aaPredicted RBP13.16□□□□□ -0.3
CTNNA1-205ENST00000517904 PIGSQ96S52 555 aa13.16□□□□□ -0.3
CTNNA1-205ENST00000517904 EHMT1Q9H9B1 1298 aa13.16□□□□□ -0.3
CTNNA1-205ENST00000517904 ALG13Q9NP73 1137 aaKnown RBP13.16□□□□□ -0.3
CTNNA1-205ENST00000517904 KIAA1671Q9BY89 1806 aa13.16□□□□□ -0.3
CTNNA1-205ENST00000517904 FRMPD4Q14CM0 1322 aa13.15□□□□□ -0.3
CTNNA1-205ENST00000517904 WDR87Q6ZQQ6 2873 aa13.15□□□□□ -0.3
CTNNA1-205ENST00000517904 PALM3A6NDB9 673 aaPredicted RBP13.15□□□□□ -0.3
CTNNA1-205ENST00000517904 SPATA31C2B4DYI2 1134 aa13.15□□□□□ -0.3
CTNNA1-205ENST00000517904 STXBP3O00186 592 aa13.15□□□□□ -0.3
CTNNA1-205ENST00000517904 MMP1P03956 469 aa13.15□□□□□ -0.3
CTNNA1-205ENST00000517904 GNAT1P11488 350 aa13.15□□□□□ -0.3
CTNNA1-205ENST00000517904 DNAJB1P25685 340 aa13.15□□□□□ -0.3
CTNNA1-205ENST00000517904 MGAT3Q09327 533 aa13.15□□□□□ -0.3
CTNNA1-205ENST00000517904 ADAM15Q13444 863 aa13.15□□□□□ -0.3
CTNNA1-205ENST00000517904 LPIN1Q14693 890 aa13.15□□□□□ -0.3
CTNNA1-205ENST00000517904 SEC23AQ15436 765 aa13.15□□□□□ -0.3
CTNNA1-205ENST00000517904 IFIT1BQ5T764 474 aaKnown RBP13.15□□□□□ -0.3
CTNNA1-205ENST00000517904 CWC27Q6UX04 472 aaKnown RBP13.15□□□□□ -0.3
CTNNA1-205ENST00000517904 SAMD3Q8N6K7 520 aa13.15□□□□□ -0.3
CTNNA1-205ENST00000517904 MSLNLQ96KJ4 702 aa13.15□□□□□ -0.3
CTNNA1-205ENST00000517904 UBAC1Q9BSL1 405 aa13.15□□□□□ -0.3
CTNNA1-205ENST00000517904 RTEL1Q9NZ71 1219 aa13.15□□□□□ -0.3
CTNNA1-205ENST00000517904 CD207Q9UJ71 328 aa13.15□□□□□ -0.3
CTNNA1-205ENST00000517904 RWDD3Q9Y3V2 267 aa13.15□□□□□ -0.3
CTNNA1-205ENST00000517904 KAT6AQ92794 2004 aa13.15□□□□□ -0.3
CTNNA1-205ENST00000517904 ENPP3O14638 875 aa13.14□□□□□ -0.31
CTNNA1-205ENST00000517904 CYTH3O43739 400 aa13.14□□□□□ -0.31
CTNNA1-205ENST00000517904 SP4Q02446 784 aa13.14□□□□□ -0.31
CTNNA1-205ENST00000517904 BTG3Q14201 252 aaPredicted RBP13.14□□□□□ -0.31
CTNNA1-205ENST00000517904 NEDD9Q14511 834 aa13.14□□□□□ -0.31
CTNNA1-205ENST00000517904 GNPTABQ3T906 1256 aa13.14□□□□□ -0.31
CTNNA1-205ENST00000517904 UTP14CQ5TAP6 766 aaKnown RBP13.14□□□□□ -0.31
CTNNA1-205ENST00000517904 TRIM67Q6ZTA4 783 aa13.14□□□□□ -0.31
CTNNA1-205ENST00000517904 BMP8AQ7Z5Y6 402 aa13.14□□□□□ -0.31
CTNNA1-205ENST00000517904 ADGRD2Q7Z7M1 963 aa13.14□□□□□ -0.31
CTNNA1-205ENST00000517904 LINC01599Q8WXQ3 324 aa13.14□□□□□ -0.31
CTNNA1-205ENST00000517904 KRT23Q9C075 422 aa13.14□□□□□ -0.31
CTNNA1-205ENST00000517904 LNPKQ9C0E8 428 aa13.14□□□□□ -0.31
CTNNA1-205ENST00000517904 CLEC1BQ9P126 229 aa13.14□□□□□ -0.31
CTNNA1-205ENST00000517904 ZNF215Q9UL58 517 aaPredicted RBP13.14□□□□□ -0.31
CTNNA1-205ENST00000517904 PLAGL2Q9UPG8 496 aa13.14□□□□□ -0.31
CTNNA1-205ENST00000517904 KMT2EQ8IZD2 1858 aa13.14□□□□□ -0.31
CTNNA1-205ENST00000517904 NRCAMQ92823 1304 aa13.13□□□□□ -0.31
CTNNA1-205ENST00000517904 SPTBN4Q9H254 2564 aa13.13□□□□□ -0.31
CTNNA1-205ENST00000517904 TMEM221A6NGB7 291 aa13.13□□□□□ -0.31
CTNNA1-205ENST00000517904 M0R296 226 aa13.13□□□□□ -0.31
CTNNA1-205ENST00000517904 FIBPO43427 364 aa13.13□□□□□ -0.31
CTNNA1-205ENST00000517904 DGKIO75912 1065 aa13.13□□□□□ -0.31
CTNNA1-205ENST00000517904 EYA4O95677 639 aa13.13□□□□□ -0.31
CTNNA1-205ENST00000517904 HDAC1Q13547 482 aaPredicted RBP13.13□□□□□ -0.31
CTNNA1-205ENST00000517904 IMMTQ16891 758 aaKnown RBP13.13□□□□□ -0.31
CTNNA1-205ENST00000517904 CYB5R4Q7L1T6 521 aa13.13□□□□□ -0.31
CTNNA1-205ENST00000517904 CRIPAKQ8N1N5 446 aa13.13□□□□□ -0.31
CTNNA1-205ENST00000517904 DSCC1Q9BVC3 393 aa13.13□□□□□ -0.31
CTNNA1-205ENST00000517904 PLVAPQ9BX97 442 aa13.13□□□□□ -0.31
CTNNA1-205ENST00000517904 RIOX1Q9H6W3 641 aa13.13□□□□□ -0.31
CTNNA1-205ENST00000517904 MRPL42Q9Y6G3 142 aaKnown RBP13.13□□□□□ -0.31
CTNNA1-205ENST00000517904 STAM2O75886 525 aa13.12□□□□□ -0.31
CTNNA1-205ENST00000517904 ITGB1P05556 798 aa13.12□□□□□ -0.31
CTNNA1-205ENST00000517904 NDUFV1P49821 464 aa13.12□□□□□ -0.31
CTNNA1-205ENST00000517904 TCF15Q12870 199 aa13.12□□□□□ -0.31
CTNNA1-205ENST00000517904 GRM4Q14833 912 aa13.12□□□□□ -0.31
CTNNA1-205ENST00000517904 FBXO47Q5MNV8 452 aa13.12□□□□□ -0.31
CTNNA1-205ENST00000517904 TAF2Q6P1X5 1199 aa13.12□□□□□ -0.31
CTNNA1-205ENST00000517904 SMRP1Q8NCR6 262 aa13.12□□□□□ -0.31
CTNNA1-205ENST00000517904 P2RX5Q93086 422 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms