RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 SPATA33Q96N06 139 aa11.16□□□□□ -0.62
CLN8-202ENST00000517514 CLIC6Q96NY7 704 aa11.16□□□□□ -0.62
CLN8-202ENST00000517514 TEKT3Q9BXF9 490 aa11.16□□□□□ -0.62
CLN8-202ENST00000517514 GDPD2Q9HCC8 539 aa11.16□□□□□ -0.62
CLN8-202ENST00000517514 JPH1Q9HDC5 661 aaPredicted RBP11.16□□□□□ -0.62
CLN8-202ENST00000517514 XPNPEP3Q9NQH7 507 aa11.16□□□□□ -0.62
CLN8-202ENST00000517514 OGDHLQ9ULD0 1010 aa11.16□□□□□ -0.62
CLN8-202ENST00000517514 KIAA0100Q14667 2235 aaKnown RBP11.16□□□□□ -0.62
CLN8-202ENST00000517514 ELP1O95163 1332 aa11.15□□□□□ -0.62
CLN8-202ENST00000517514 LAD1O00515 517 aa11.15□□□□□ -0.62
CLN8-202ENST00000517514 SPTLC2O15270 562 aa11.15□□□□□ -0.62
CLN8-202ENST00000517514 LGR5O75473 907 aa11.15□□□□□ -0.62
CLN8-202ENST00000517514 STBD1O95210 358 aa11.15□□□□□ -0.62
CLN8-202ENST00000517514 BAG4O95429 457 aaKnown RBP11.15□□□□□ -0.62
CLN8-202ENST00000517514 SGPL1O95470 568 aa11.15□□□□□ -0.62
CLN8-202ENST00000517514 GJB1P08034 283 aa11.15□□□□□ -0.62
CLN8-202ENST00000517514 ATP4AP20648 1035 aa11.15□□□□□ -0.62
CLN8-202ENST00000517514 CST5P28325 142 aaPredicted RBP11.15□□□□□ -0.62
CLN8-202ENST00000517514 CDC25AP30304 524 aa11.15□□□□□ -0.62
CLN8-202ENST00000517514 TECP42680 631 aa11.15□□□□□ -0.62
CLN8-202ENST00000517514 SP4Q02446 784 aa11.15□□□□□ -0.62
CLN8-202ENST00000517514 FSCN1Q16658 493 aaKnown RBP11.15□□□□□ -0.62
CLN8-202ENST00000517514 UGCGQ16739 394 aa11.15□□□□□ -0.62
CLN8-202ENST00000517514 ARL6IP4Q66PJ3 421 aaKnown RBP11.15□□□□□ -0.62
CLN8-202ENST00000517514 SLFN12Q8IYM2 578 aa11.15□□□□□ -0.62
CLN8-202ENST00000517514 GIMAP8Q8ND71 665 aaPredicted RBP11.15□□□□□ -0.62
CLN8-202ENST00000517514 KAT2BQ92831 832 aa11.15□□□□□ -0.62
CLN8-202ENST00000517514 SDF4Q9BRK5 362 aa11.15□□□□□ -0.62
CLN8-202ENST00000517514 C16orf70Q9BSU1 422 aa11.15□□□□□ -0.62
CLN8-202ENST00000517514 MLXIPQ9HAP2 919 aa11.15□□□□□ -0.62
CLN8-202ENST00000517514 WRAP73Q9P2S5 460 aaPredicted RBP11.15□□□□□ -0.62
CLN8-202ENST00000517514 PCDHA12Q9UN75 941 aa11.15□□□□□ -0.62
CLN8-202ENST00000517514 SRPRBQ9Y5M8 271 aaKnown RBP11.15□□□□□ -0.62
CLN8-202ENST00000517514 TRIP12Q14669 1992 aaPredicted RBP11.15□□□□□ -0.62
CLN8-202ENST00000517514 ALPK3Q96L96 1907 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 VWA3AA6NCI4 1184 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 CHMP2AO43633 222 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 ZNF862O60290 1169 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 MSCO60682 206 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 PPP6R2O75170 966 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 BMP15O95972 392 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 C6orf222P0C671 652 aaPredicted RBP11.14□□□□□ -0.63
CLN8-202ENST00000517514 SUPT20HL2P0C7V6 817 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 SPATA31C1P0DKV0 1188 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 GJA8P48165 433 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 KRT85P78386 507 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 KRT76Q01546 638 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 STK38Q15208 465 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 ECM1Q16610 540 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 DTHD1Q6ZMT9 781 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 TRIM50Q86XT4 487 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 CCDC60Q8IWA6 550 aaPredicted RBP11.14□□□□□ -0.63
CLN8-202ENST00000517514 LRRC15Q8TF66 581 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 U2AF1L4Q8WU68 220 aaKnown RBP11.14□□□□□ -0.63
CLN8-202ENST00000517514 SEPT1Q8WYJ6 367 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 HSD17B14Q9BPX1 270 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 CSRNP2Q9H175 543 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 DISC1Q9NRI5 854 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 RGL1Q9NZL6 768 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 PCDHA7Q9UN72 937 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 CEP131Q9UPN4 1083 aa11.14□□□□□ -0.63
CLN8-202ENST00000517514 GRIN2DO15399 1336 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 IGSF9BQ9UPX0 1349 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 A0A087X0B3 334 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 PPFIA4O75335 1185 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 MED24O75448 989 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 SLITRK3O94933 977 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 LGALS2P05162 132 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 ZNF286BP0CG31 522 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 TCF7P36402 384 aaPredicted RBP11.13□□□□□ -0.63
CLN8-202ENST00000517514 PURAQ00577 322 aaKnown RBP11.13□□□□□ -0.63
CLN8-202ENST00000517514 PDIA5Q14554 519 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 EPHA7Q15375 998 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 KCNA10Q16322 511 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 GNASQ5JWF2 1037 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 SPECC1Q5M775 1068 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 NCAPH2Q6IBW4 605 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 SHC4Q6S5L8 630 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 MIER3Q7Z3K6 550 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 SMAP1Q8IYB5 467 aaPredicted RBP11.13□□□□□ -0.63
CLN8-202ENST00000517514 PPP1R13LQ8WUF5 828 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 DYDC2Q96IM9 177 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 EPSTI1Q96J88 318 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 PNMA5Q96PV4 448 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 EIF2AK1Q9BQI3 630 aaKnown RBP11.13□□□□□ -0.63
CLN8-202ENST00000517514 AP5M1Q9H0R1 490 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 CFAP45Q9UL16 551 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 PCDHA10Q9Y5I2 948 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 ATP6V1DQ9Y5K8 247 aa11.13□□□□□ -0.63
CLN8-202ENST00000517514 MAFBQ9Y5Q3 323 aaPredicted RBP11.13□□□□□ -0.63
CLN8-202ENST00000517514 EMSYQ7Z589 1322 aa11.12□□□□□ -0.63
CLN8-202ENST00000517514 A0A087WWV3 80 aa11.12□□□□□ -0.63
CLN8-202ENST00000517514 WDR64B1ANS9 1081 aa11.12□□□□□ -0.63
CLN8-202ENST00000517514 HAS3O00219 553 aa11.12□□□□□ -0.63
CLN8-202ENST00000517514 ZBTB39O15060 712 aa11.12□□□□□ -0.63
CLN8-202ENST00000517514 F2P00734 622 aa11.12□□□□□ -0.63
CLN8-202ENST00000517514 ASGR1P07306 291 aa11.12□□□□□ -0.63
CLN8-202ENST00000517514 EN2P19622 333 aaPredicted RBP11.12□□□□□ -0.63
CLN8-202ENST00000517514 SFNP31947 248 aa11.12□□□□□ -0.63
CLN8-202ENST00000517514 CPT1AP50416 773 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms