RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 EPM2AIP1Q7L775 607 aaPredicted RBP4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 C14orf80Q86SX3 495 aa4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 NME9Q86XW9 330 aa4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 STK11IPQ8N1F8 1099 aa4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 ANKS4BQ8N8V4 417 aa4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 SVIPQ8NHG7 77 aa4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 TTLL11Q8NHH1 800 aa4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 C16orf92Q96LL3 132 aa4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 JMJD8Q96S16 334 aa4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 ELF4Q99607 663 aaPredicted RBP4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 PCIF1Q9H4Z3 704 aa4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 RC3H2Q9HBD1 1191 aaKnown RBP4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 ZNF277Q9NRM2 450 aaPredicted RBP4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 TPSG1Q9NRR2 321 aa4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 TOPORSQ9NS56 1045 aaPredicted RBP4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 CCM2LQ9NUG4 571 aaPredicted RBP4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 OBP2AQ9NY56 170 aa4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 ZC3H7BQ9UGR2 993 aaKnown RBP4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 COA3Q9Y2R0 106 aaPredicted RBP4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 KRIT1O00522 736 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 CYP26A1O43174 497 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 PCDHGA12O60330 932 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 TADA3O75528 432 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 ZRANB2O95218 330 aaKnown RBP eCLIP4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 MT-CO1P00395 513 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 ZGLP1P0C6A0 271 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 AKAP5P24588 427 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 RPL10P27635 214 aaKnown RBP4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 KIF11P52732 1056 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 CHRNEQ04844 493 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 PCBP2Q15366 365 aaKnown RBP eCLIP4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 NR0B2Q15466 257 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 LONRF3Q496Y0 759 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 MINDY4Q4G0A6 757 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 HSF5Q4G112 596 aaPredicted RBP4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 CYB5RLQ6IPT4 315 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 FRMD7Q6ZUT3 714 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 KCTD1Q719H9 257 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 OSTM1Q86WC4 334 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 PTRH1Q86Y79 214 aaKnown RBP4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 TEX2Q8IWB9 1127 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 EXOC8Q8IYI6 725 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 NETO2Q8NC67 525 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 RUNDC1Q96C34 613 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 TRMT2BQ96GJ1 504 aaKnown RBP4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 MAML3Q96JK9 1138 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 RPS6KC1Q96S38 1066 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 POLR3GLQ9BT43 218 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 JAM3Q9BX67 310 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 MARCH2Q9P0N8 246 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 IP6K2Q9UHH9 426 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 ACSL6Q9UKU0 697 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 DSEQ9UL01 958 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 PCDHGA9Q9Y5G4 932 aaKnown RBP4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 PCDHGA8Q9Y5G5 932 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 PCDHGA7Q9Y5G6 932 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 PCDHGA6Q9Y5G7 932 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 PCDHGA3Q9Y5H0 932 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 PCDHGA2Q9Y5H1 932 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 MRFAP1Q9Y605 127 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 ATP23Q9Y6H3 246 aa4.37□□□□□ -1.71
RNU6-840P-201ENST00000517275 C22orf46C9J442 243 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 NKRFO15226 690 aaKnown RBP eCLIP4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 SRGAP3O43295 1099 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 NRDCO43847 1150 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 KDM1AO60341 852 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 PPP1R11O60927 126 aaPredicted RBP4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 LTFP02788 710 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 PRNPP04156 253 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 ITGB2P05107 769 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 ASGR2P07307 311 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 PF4V1P10720 104 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 PHKG2P15735 406 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 SLC9A1P19634 815 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 ENPP1P22413 925 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 MTNR1BP49286 362 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 HERVK_113P62684 666 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 ADCY1Q08828 1119 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 FSCN1Q16658 493 aaKnown RBP4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 NKAPLQ5M9Q1 402 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 B3GNT9Q6UX72 402 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 DCP2Q8IU60 420 aaKnown RBP4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 WFDC3Q8IUB2 231 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 LZTR1Q8N653 840 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 PIP4K2CQ8TBX8 421 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 USP33Q8TEY7 942 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 HSPBAP1Q96EW2 488 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 CHAMP1Q96JM3 812 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 KCNJ15Q99712 375 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 SARGQ9BW04 601 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 SLC12A5Q9H2X9 1139 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 SMOC1Q9H4F8 434 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 NMRK2Q9NPI5 230 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 PDLIM7Q9NR12 457 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 HSPBP1Q9NZL4 362 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 GULP1Q9UBP9 304 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 PTPN22Q9Y2R2 807 aa4.36□□□□□ -1.71
RNU6-840P-201ENST00000517275 VSTM5A8MXK1 200 aa4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 C4BPAP04003 597 aaKnown RBP4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 GLI4P10075 376 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms