RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 PRR16Q569H4 304 aa22.02■■□□□ 1.12
LMNA-225ENST00000515824 KRT25Q7Z3Z0 450 aa22.02■■□□□ 1.12
LMNA-225ENST00000515824 TRIM50Q86XT4 487 aa22.02■■□□□ 1.12
LMNA-225ENST00000515824 RPUSD2Q8IZ73 545 aaKnown RBP22.02■■□□□ 1.12
LMNA-225ENST00000515824 GLG1Q92896 1179 aa22.02■■□□□ 1.12
LMNA-225ENST00000515824 ZNF577Q9BSK1 485 aa22.02■■□□□ 1.12
LMNA-225ENST00000515824 WNT8AQ9H1J5 351 aa22.02■■□□□ 1.12
LMNA-225ENST00000515824 SMARCAD1Q9H4L7 1026 aa22.02■■□□□ 1.12
LMNA-225ENST00000515824 IL23AQ9NPF7 189 aa22.02■■□□□ 1.12
LMNA-225ENST00000515824 TBC1D22BQ9NU19 505 aa22.02■■□□□ 1.12
LMNA-225ENST00000515824 SMIM10L2AP0DMW4 78 aa22.01■■□□□ 1.11
LMNA-225ENST00000515824 SMIM10L2BP0DMW5 78 aa22.01■■□□□ 1.11
LMNA-225ENST00000515824 ACTR2P61160 394 aa22.01■■□□□ 1.11
LMNA-225ENST00000515824 RNPEPQ9H4A4 650 aa22.01■■□□□ 1.11
LMNA-225ENST00000515824 AZI2Q9H6S1 392 aa22.01■■□□□ 1.11
LMNA-225ENST00000515824 SH2B1Q9NRF2 756 aaPredicted RBP22.01■■□□□ 1.11
LMNA-225ENST00000515824 ERAP1Q9NZ08 941 aa22.01■■□□□ 1.11
LMNA-225ENST00000515824 CCDC194A0A1B0GVG4 234 aa22■■□□□ 1.11
LMNA-225ENST00000515824 DDX39AO00148 427 aaKnown RBP22■■□□□ 1.11
LMNA-225ENST00000515824 ST18O60284 1047 aa22■■□□□ 1.11
LMNA-225ENST00000515824 JAK2O60674 1132 aa22■■□□□ 1.11
LMNA-225ENST00000515824 PTK7Q13308 1070 aa22■■□□□ 1.11
LMNA-225ENST00000515824 NONOQ15233 471 aaKnown RBP eCLIP22■■□□□ 1.11
LMNA-225ENST00000515824 PSRC1Q6PGN9 363 aaPredicted RBP22■■□□□ 1.11
LMNA-225ENST00000515824 CCDC83Q8IWF9 413 aa22■■□□□ 1.11
LMNA-225ENST00000515824 SCLYQ96I15 445 aa22■■□□□ 1.11
LMNA-225ENST00000515824 RNPC3Q96LT9 517 aaKnown RBP22■■□□□ 1.11
LMNA-225ENST00000515824 CTAGE1Q96RT6 745 aa22■■□□□ 1.11
LMNA-225ENST00000515824 BUD13Q9BRD0 619 aaKnown RBP eCLIP22■■□□□ 1.112e-12■■■□□ 16.4
LMNA-225ENST00000515824 LLPHQ9BRT6 129 aaKnown RBP22■■□□□ 1.11
LMNA-225ENST00000515824 BRMS1Q9HCU9 246 aa22■■□□□ 1.11
LMNA-225ENST00000515824 GJB4Q9NTQ9 266 aa22■■□□□ 1.11
LMNA-225ENST00000515824 TCEAL9Q9UHQ7 104 aa22■■□□□ 1.11
LMNA-225ENST00000515824 LAMA3Q16787 3333 aa22■■□□□ 1.11
LMNA-225ENST00000515824 DOCK5Q9H7D0 1870 aa21.99■■□□□ 1.11
LMNA-225ENST00000515824 DHX15O43143 795 aaKnown RBP21.99■■□□□ 1.11
LMNA-225ENST00000515824 EDIL3O43854 480 aa21.99■■□□□ 1.11
LMNA-225ENST00000515824 LGR5O75473 907 aa21.99■■□□□ 1.11
LMNA-225ENST00000515824 IQCF3P0C7M6 154 aa21.99■■□□□ 1.11
LMNA-225ENST00000515824 ACRP10323 421 aa21.99■■□□□ 1.11
LMNA-225ENST00000515824 ZNF200P98182 395 aaPredicted RBP21.99■■□□□ 1.11
LMNA-225ENST00000515824 ST3GAL1Q11201 340 aa21.99■■□□□ 1.11
LMNA-225ENST00000515824 TRIM29Q14134 588 aa21.99■■□□□ 1.11
LMNA-225ENST00000515824 TMEM240Q5SV17 173 aa21.99■■□□□ 1.11
LMNA-225ENST00000515824 C16orf59Q7L2K0 433 aa21.99■■□□□ 1.11
LMNA-225ENST00000515824 AFAP1L1Q8TED9 768 aa21.99■■□□□ 1.11
LMNA-225ENST00000515824 TNPO1Q92973 898 aaKnown RBP21.99■■□□□ 1.11
LMNA-225ENST00000515824 ATP6V0A1Q93050 837 aa21.99■■□□□ 1.11
LMNA-225ENST00000515824 SOX1O00570 391 aaPredicted RBP21.98■■□□□ 1.11
LMNA-225ENST00000515824 ATG7O95352 703 aa21.98■■□□□ 1.11
LMNA-225ENST00000515824 FGBP02675 491 aa21.98■■□□□ 1.11
LMNA-225ENST00000515824 MARK3P27448 753 aa21.98■■□□□ 1.11
LMNA-225ENST00000515824 HOXC8P31273 242 aa21.98■■□□□ 1.11
LMNA-225ENST00000515824 RFC2P35250 354 aa21.98■■□□□ 1.11
LMNA-225ENST00000515824 ZNF365Q70YC5 407 aa21.98■■□□□ 1.11
LMNA-225ENST00000515824 LENG9Q96B70 501 aa21.98■■□□□ 1.11
LMNA-225ENST00000515824 UIMC1Q96RL1 719 aa21.98■■□□□ 1.11
LMNA-225ENST00000515824 SETD4Q9NVD3 440 aa21.98■■□□□ 1.11
LMNA-225ENST00000515824 EMSYQ7Z589 1322 aa21.98■■□□□ 1.11
LMNA-225ENST00000515824 NRCAMQ92823 1304 aa21.98■■□□□ 1.11
LMNA-225ENST00000515824 CYP3A7-CYP3A51PA0A087WV96 503 aa21.97■■□□□ 1.11
LMNA-225ENST00000515824 PFKMP08237 780 aa21.97■■□□□ 1.11
LMNA-225ENST00000515824 CYP3A7P24462 503 aa21.97■■□□□ 1.11
LMNA-225ENST00000515824 KRT2P35908 639 aa21.97■■□□□ 1.11
LMNA-225ENST00000515824 STAT5BP51692 787 aa21.97■■□□□ 1.11
LMNA-225ENST00000515824 RBL2Q08999 1139 aa21.97■■□□□ 1.11
LMNA-225ENST00000515824 HIC1Q14526 733 aa21.97■■□□□ 1.11
LMNA-225ENST00000515824 INF2Q27J81 1249 aa21.97■■□□□ 1.11
LMNA-225ENST00000515824 Q4G0T1 1027 aa21.97■■□□□ 1.11
LMNA-225ENST00000515824 MIS18BP1Q6P0N0 1132 aa21.97■■□□□ 1.11
LMNA-225ENST00000515824 MOXD1Q6UVY6 613 aa21.97■■□□□ 1.11
LMNA-225ENST00000515824 PLPPR4Q7Z2D5 763 aa21.97■■□□□ 1.11
LMNA-225ENST00000515824 OXER1Q8TDS5 423 aa21.97■■□□□ 1.11
LMNA-225ENST00000515824 LRCH3Q96II8 777 aa21.97■■□□□ 1.11
LMNA-225ENST00000515824 TBC1D32Q96NH3 1257 aa21.97■■□□□ 1.11
LMNA-225ENST00000515824 PCYT2Q99447 389 aa21.97■■□□□ 1.11
LMNA-225ENST00000515824 MSH4O15457 936 aa21.96■■□□□ 1.11
LMNA-225ENST00000515824 TREHO43280 583 aa21.96■■□□□ 1.11
LMNA-225ENST00000515824 PARNO95453 639 aaKnown RBP21.96■■□□□ 1.11
LMNA-225ENST00000515824 CCNE2O96020 404 aa21.96■■□□□ 1.11
LMNA-225ENST00000515824 CKBP12277 381 aa21.96■■□□□ 1.11
LMNA-225ENST00000515824 SELPP16109 830 aa21.96■■□□□ 1.11
LMNA-225ENST00000515824 ZNF746Q6NUN9 644 aaPredicted RBP21.96■■□□□ 1.11
LMNA-225ENST00000515824 ABHD15Q6UXT9 468 aa21.96■■□□□ 1.11
LMNA-225ENST00000515824 SERINC5Q86VE9 423 aa21.96■■□□□ 1.11
LMNA-225ENST00000515824 DHX38Q92620 1227 aaKnown RBP21.96■■□□□ 1.11
LMNA-225ENST00000515824 MTIF3Q9H2K0 278 aaKnown RBP21.96■■□□□ 1.11
LMNA-225ENST00000515824 BACH1O14867 736 aa21.95■■□□□ 1.1
LMNA-225ENST00000515824 TDP2O95551 362 aa21.95■■□□□ 1.1
LMNA-225ENST00000515824 SLC26A2P50443 739 aa21.95■■□□□ 1.1
LMNA-225ENST00000515824 HMGN5P82970 282 aaKnown RBP21.95■■□□□ 1.1
LMNA-225ENST00000515824 KRT76Q01546 638 aa21.95■■□□□ 1.1
LMNA-225ENST00000515824 PPFIA1Q13136 1202 aa21.95■■□□□ 1.1
LMNA-225ENST00000515824 LETM2Q2VYF4 491 aa21.95■■□□□ 1.1
LMNA-225ENST00000515824 FAM160B1Q5W0V3 765 aa21.95■■□□□ 1.1
LMNA-225ENST00000515824 GPR153Q6NV75 609 aa21.95■■□□□ 1.1
LMNA-225ENST00000515824 PIK3AP1Q6ZUJ8 805 aa21.95■■□□□ 1.1
LMNA-225ENST00000515824 LRRC8DQ7L1W4 858 aa21.95■■□□□ 1.1
LMNA-225ENST00000515824 DEFB128Q7Z7B8 93 aa21.95■■□□□ 1.1
LMNA-225ENST00000515824 NEK8Q86SG6 692 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms