RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 CRIP3Q6Q6R5 217 aa6.27□□□□□ -1.41
LINC01088-211ENST00000515597 OTOP3Q7RTS5 596 aa6.27□□□□□ -1.41
LINC01088-211ENST00000515597 GPR155Q7Z3F1 870 aa6.27□□□□□ -1.41
LINC01088-211ENST00000515597 RALYLQ86SE5 291 aaKnown RBP6.27□□□□□ -1.41
LINC01088-211ENST00000515597 TRIM48Q8IWZ4 208 aa6.27□□□□□ -1.41
LINC01088-211ENST00000515597 SORCS2Q96PQ0 1159 aa6.27□□□□□ -1.41
LINC01088-211ENST00000515597 CDK5RAP1Q96SZ6 601 aaKnown RBP6.27□□□□□ -1.41
LINC01088-211ENST00000515597 TELO2Q9Y4R8 837 aa6.27□□□□□ -1.41
LINC01088-211ENST00000515597 PATE3B3GLJ2 98 aa6.26□□□□□ -1.41
LINC01088-211ENST00000515597 NKRFO15226 690 aaKnown RBP eCLIP6.26□□□□□ -1.41
LINC01088-211ENST00000515597 FBXO21O94952 628 aa6.26□□□□□ -1.41
LINC01088-211ENST00000515597 CKMP06732 381 aa6.26□□□□□ -1.41
LINC01088-211ENST00000515597 FAHP16930 419 aa6.26□□□□□ -1.41
LINC01088-211ENST00000515597 GRK2P25098 689 aa6.26□□□□□ -1.41
LINC01088-211ENST00000515597 GRK3P35626 688 aa6.26□□□□□ -1.41
LINC01088-211ENST00000515597 RAB33AQ14088 237 aa6.26□□□□□ -1.41
LINC01088-211ENST00000515597 R3HDM1Q15032 1099 aaKnown RBP6.26□□□□□ -1.41
LINC01088-211ENST00000515597 SMAD2Q15796 467 aaKnown RBP6.26□□□□□ -1.41
LINC01088-211ENST00000515597 NTRK3Q16288 839 aa6.26□□□□□ -1.41
LINC01088-211ENST00000515597 SKIDA1Q1XH10 827 aa6.26□□□□□ -1.41
LINC01088-211ENST00000515597 NAALADL2Q58DX5 795 aa6.26□□□□□ -1.41
LINC01088-211ENST00000515597 SPDYAQ5MJ70 313 aa6.26□□□□□ -1.41
LINC01088-211ENST00000515597 Q6ZUG5 572 aa6.26□□□□□ -1.41
LINC01088-211ENST00000515597 ZFPM1Q8IX07 1006 aa6.26□□□□□ -1.41
LINC01088-211ENST00000515597 UHMK1Q8TAS1 419 aaKnown RBP6.26□□□□□ -1.41
LINC01088-211ENST00000515597 GNRHR2Q96P88 292 aa6.26□□□□□ -1.41
LINC01088-211ENST00000515597 ZNF747Q9BV97 191 aa6.26□□□□□ -1.41
LINC01088-211ENST00000515597 VPS11Q9H270 941 aa6.26□□□□□ -1.41
LINC01088-211ENST00000515597 BLACEA4D250 179 aa6.25□□□□□ -1.41
LINC01088-211ENST00000515597 PRODHO43272 600 aa6.25□□□□□ -1.41
LINC01088-211ENST00000515597 KNG1P01042 644 aa6.25□□□□□ -1.41
LINC01088-211ENST00000515597 SLPIP03973 132 aa6.25□□□□□ -1.41
LINC01088-211ENST00000515597 GNAT1P11488 350 aa6.25□□□□□ -1.41
LINC01088-211ENST00000515597 GDF5P43026 501 aa6.25□□□□□ -1.41
LINC01088-211ENST00000515597 HSP90AA2PQ14568 343 aaPredicted RBP6.25□□□□□ -1.41
LINC01088-211ENST00000515597 CD276Q5ZPR3 534 aa6.25□□□□□ -1.41
LINC01088-211ENST00000515597 RSPO2Q6UXX9 243 aaPredicted RBP6.25□□□□□ -1.41
LINC01088-211ENST00000515597 LBX2Q6XYB7 198 aa6.25□□□□□ -1.41
LINC01088-211ENST00000515597 STPG3Q8N7X2 389 aa6.25□□□□□ -1.41
LINC01088-211ENST00000515597 ST13P5Q8NFI4 369 aaPredicted RBP6.25□□□□□ -1.41
LINC01088-211ENST00000515597 SGSM3Q96HU1 749 aa6.25□□□□□ -1.41
LINC01088-211ENST00000515597 AARSD1Q9BTE6 412 aaKnown RBP6.25□□□□□ -1.41
LINC01088-211ENST00000515597 ARHGEF4Q9NR80 690 aa6.25□□□□□ -1.41
LINC01088-211ENST00000515597 TCAF1Q9Y4C2 921 aa6.25□□□□□ -1.41
LINC01088-211ENST00000515597 MUSKO15146 869 aa6.24□□□□□ -1.41
LINC01088-211ENST00000515597 SUV39H1O43463 412 aa6.24□□□□□ -1.41
LINC01088-211ENST00000515597 ZNF623O75123 536 aa6.24□□□□□ -1.41
LINC01088-211ENST00000515597 AMHP03971 560 aa6.24□□□□□ -1.41
LINC01088-211ENST00000515597 CSF2RBP32927 897 aa6.24□□□□□ -1.41
LINC01088-211ENST00000515597 Q8TCH9 128 aa6.24□□□□□ -1.41
LINC01088-211ENST00000515597 DCAF4Q8WV16 495 aa6.24□□□□□ -1.41
LINC01088-211ENST00000515597 OSBP2Q969R2 916 aa6.24□□□□□ -1.41
LINC01088-211ENST00000515597 LRRC37BQ96QE4 947 aa6.24□□□□□ -1.41
LINC01088-211ENST00000515597 KCND1Q9NSA2 647 aa6.24□□□□□ -1.41
LINC01088-211ENST00000515597 ARHGAP20Q9P2F6 1191 aa6.24□□□□□ -1.41
LINC01088-211ENST00000515597 PFKPQ01813 784 aa6.23□□□□□ -1.41
LINC01088-211ENST00000515597 SPIRE1Q08AE8 756 aa6.23□□□□□ -1.41
LINC01088-211ENST00000515597 KIZQ2M2Z5 673 aa6.23□□□□□ -1.41
LINC01088-211ENST00000515597 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.23□□□□□ -1.41
LINC01088-211ENST00000515597 C8orf37Q96NL8 207 aa6.23□□□□□ -1.41
LINC01088-211ENST00000515597 DSEQ9UL01 958 aa6.23□□□□□ -1.41
LINC01088-211ENST00000515597 PTPN22Q9Y2R2 807 aa6.23□□□□□ -1.41
LINC01088-211ENST00000515597 MSRB2Q9Y3D2 182 aa6.23□□□□□ -1.41
LINC01088-211ENST00000515597 IQCA1LA6NCM1 817 aa6.22□□□□□ -1.41
LINC01088-211ENST00000515597 ZNF839A8K0R7 811 aa6.22□□□□□ -1.41
LINC01088-211ENST00000515597 STK10O94804 968 aaKnown RBP6.22□□□□□ -1.41
LINC01088-211ENST00000515597 SOD2P04179 222 aa6.22□□□□□ -1.41
LINC01088-211ENST00000515597 PABPC1P11940 636 aaKnown RBP6.22□□□□□ -1.41
LINC01088-211ENST00000515597 ACVRL1P37023 503 aa6.22□□□□□ -1.41
LINC01088-211ENST00000515597 HMGA2P52926 109 aa6.22□□□□□ -1.41
LINC01088-211ENST00000515597 HABP4Q5JVS0 413 aaKnown RBP6.22□□□□□ -1.41
LINC01088-211ENST00000515597 YOD1Q5VVQ6 348 aaPredicted RBP6.22□□□□□ -1.41
LINC01088-211ENST00000515597 KRTAP5-3Q6L8H2 238 aa6.22□□□□□ -1.41
LINC01088-211ENST00000515597 ZNF669Q96BR6 464 aaPredicted RBP6.22□□□□□ -1.41
LINC01088-211ENST00000515597 AJUBAQ96IF1 538 aa6.22□□□□□ -1.41
LINC01088-211ENST00000515597 LMF1Q96S06 567 aa6.22□□□□□ -1.41
LINC01088-211ENST00000515597 TACO1Q9BSH4 297 aaKnown RBP6.22□□□□□ -1.41
LINC01088-211ENST00000515597 CD244Q9BZW8 370 aa6.22□□□□□ -1.41
LINC01088-211ENST00000515597 SLC4A7Q9Y6M7 1214 aa6.22□□□□□ -1.41
LINC01088-211ENST00000515597 ACOT7O00154 380 aa6.21□□□□□ -1.42
LINC01088-211ENST00000515597 FOXS1O43638 330 aa6.21□□□□□ -1.42
LINC01088-211ENST00000515597 IL18BPO95998 194 aa6.21□□□□□ -1.42
LINC01088-211ENST00000515597 CHGBP05060 677 aa6.21□□□□□ -1.42
LINC01088-211ENST00000515597 ZNF888P0CJ79 500 aaPredicted RBP6.21□□□□□ -1.42
LINC01088-211ENST00000515597 FGFR1P11362 822 aa6.21□□□□□ -1.42
LINC01088-211ENST00000515597 GPR85P60893 370 aa6.21□□□□□ -1.42
LINC01088-211ENST00000515597 TCTN3Q6NUS6 607 aa6.21□□□□□ -1.42
LINC01088-211ENST00000515597 NSMFQ6X4W1 530 aa6.21□□□□□ -1.42
LINC01088-211ENST00000515597 KCTD1Q719H9 257 aa6.21□□□□□ -1.42
LINC01088-211ENST00000515597 CKAP2LQ8IYA6 745 aa6.21□□□□□ -1.42
LINC01088-211ENST00000515597 MRIQ9BWK5 157 aa6.21□□□□□ -1.42
LINC01088-211ENST00000515597 TRIM55Q9BYV6 548 aa6.21□□□□□ -1.42
LINC01088-211ENST00000515597 IPPKQ9H8X2 491 aa6.21□□□□□ -1.42
LINC01088-211ENST00000515597 SEC61A2Q9H9S3 476 aa6.21□□□□□ -1.42
LINC01088-211ENST00000515597 ASXL2Q76L83 1435 aa6.21□□□□□ -1.42
LINC01088-211ENST00000515597 H0Y858 1186 aa6.2□□□□□ -1.42
LINC01088-211ENST00000515597 FZD7O75084 574 aa6.2□□□□□ -1.42
LINC01088-211ENST00000515597 ENO2P09104 434 aaPredicted RBP6.2□□□□□ -1.42
LINC01088-211ENST00000515597 IFRD2Q12894 506 aaPredicted RBP6.2□□□□□ -1.42
LINC01088-211ENST00000515597 NBPF6Q5VWK0 638 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms