RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 ZNF618Q5T7W0 954 aa13.1□□□□□ -0.31
VCAN-212ENST00000515397 RASIP1Q5U651 963 aa13.1□□□□□ -0.31
VCAN-212ENST00000515397 PSRC1Q6PGN9 363 aaPredicted RBP13.1□□□□□ -0.31
VCAN-212ENST00000515397 HERVK_113Q902F9 699 aa13.1□□□□□ -0.31
VCAN-212ENST00000515397 GLG1Q92896 1179 aa13.1□□□□□ -0.31
VCAN-212ENST00000515397 GJA10Q969M2 543 aa13.1□□□□□ -0.31
VCAN-212ENST00000515397 PCYT2Q99447 389 aa13.1□□□□□ -0.31
VCAN-212ENST00000515397 OSBPL7Q9BZF2 842 aa13.1□□□□□ -0.31
VCAN-212ENST00000515397 GLT8D2Q9H1C3 349 aa13.1□□□□□ -0.31
VCAN-212ENST00000515397 TTYH1Q9H313 450 aaPredicted RBP13.1□□□□□ -0.31
VCAN-212ENST00000515397 SEMA6BQ9H3T3 888 aa13.1□□□□□ -0.31
VCAN-212ENST00000515397 JPH1Q9HDC5 661 aaPredicted RBP13.1□□□□□ -0.31
VCAN-212ENST00000515397 TRIP12Q14669 1992 aaPredicted RBP13.1□□□□□ -0.31
VCAN-212ENST00000515397 PFKFB2O60825 505 aa13.09□□□□□ -0.31
VCAN-212ENST00000515397 NBNO60934 754 aa13.09□□□□□ -0.31
VCAN-212ENST00000515397 MYOGP15173 224 aa13.09□□□□□ -0.31
VCAN-212ENST00000515397 SELPP16109 830 aa13.09□□□□□ -0.31
VCAN-212ENST00000515397 THPOP40225 353 aa13.09□□□□□ -0.31
VCAN-212ENST00000515397 ACTR2P61160 394 aa13.09□□□□□ -0.31
VCAN-212ENST00000515397 IGBP1P78318 339 aa13.09□□□□□ -0.31
VCAN-212ENST00000515397 SMAD3P84022 425 aaKnown RBP13.09□□□□□ -0.31
VCAN-212ENST00000515397 PTK7Q13308 1070 aa13.09□□□□□ -0.31
VCAN-212ENST00000515397 SCN5AQ14524 2016 aa13.09□□□□□ -0.31
VCAN-212ENST00000515397 C8orf34Q49A92 452 aa13.09□□□□□ -0.31
VCAN-212ENST00000515397 PRR16Q569H4 304 aa13.09□□□□□ -0.31
VCAN-212ENST00000515397 LRRC8DQ7L1W4 858 aa13.09□□□□□ -0.31
VCAN-212ENST00000515397 TRMT1LQ7Z2T5 733 aaKnown RBP13.09□□□□□ -0.31
VCAN-212ENST00000515397 TMCO2Q7Z6W1 182 aaPredicted RBP13.09□□□□□ -0.31
VCAN-212ENST00000515397 GIMAP8Q8ND71 665 aaPredicted RBP13.09□□□□□ -0.31
VCAN-212ENST00000515397 CCDC12Q8WUD4 166 aaPredicted RBP13.09□□□□□ -0.31
VCAN-212ENST00000515397 CRYGNQ8WXF5 182 aa13.09□□□□□ -0.31
VCAN-212ENST00000515397 GUCD1Q96NT3 240 aa13.09□□□□□ -0.31
VCAN-212ENST00000515397 SDF4Q9BRK5 362 aa13.09□□□□□ -0.31
VCAN-212ENST00000515397 SLC9A2Q9UBY0 812 aa13.09□□□□□ -0.31
VCAN-212ENST00000515397 TET1Q8NFU7 2136 aa13.09□□□□□ -0.31
VCAN-212ENST00000515397 IGLV3-22A0A075B6J6 115 aa13.08□□□□□ -0.32
VCAN-212ENST00000515397 PITPNM1O00562 1244 aa13.08□□□□□ -0.32
VCAN-212ENST00000515397 MAFGO15525 162 aa13.08□□□□□ -0.32
VCAN-212ENST00000515397 DEXIO95424 95 aa13.08□□□□□ -0.32
VCAN-212ENST00000515397 CCNE2O96020 404 aa13.08□□□□□ -0.32
VCAN-212ENST00000515397 CYP3A4P08684 503 aa13.08□□□□□ -0.32
VCAN-212ENST00000515397 CTSHP09668 335 aa13.08□□□□□ -0.32
VCAN-212ENST00000515397 DNAJB2P25686 324 aa13.08□□□□□ -0.32
VCAN-212ENST00000515397 MBTPS1Q14703 1052 aa13.08□□□□□ -0.32
VCAN-212ENST00000515397 NPY5RQ15761 445 aa13.08□□□□□ -0.32
VCAN-212ENST00000515397 ZNF697Q5TEC3 545 aa13.08□□□□□ -0.32
VCAN-212ENST00000515397 CPLX2Q6PUV4 134 aaKnown RBP13.08□□□□□ -0.32
VCAN-212ENST00000515397 TRAF7Q6Q0C0 670 aa13.08□□□□□ -0.32
VCAN-212ENST00000515397 RUFY4Q6ZNE9 571 aa13.08□□□□□ -0.32
VCAN-212ENST00000515397 POTEDQ86YR6 584 aa13.08□□□□□ -0.32
VCAN-212ENST00000515397 CCDC148Q8NFR7 591 aa13.08□□□□□ -0.32
VCAN-212ENST00000515397 CAGE1Q8TC20 777 aa13.08□□□□□ -0.32
VCAN-212ENST00000515397 BICD2Q8TD16 824 aa13.08□□□□□ -0.32
VCAN-212ENST00000515397 PBX4Q9BYU1 374 aa13.08□□□□□ -0.32
VCAN-212ENST00000515397 ZNF215Q9UL58 517 aaPredicted RBP13.08□□□□□ -0.32
VCAN-212ENST00000515397 SLC4A7Q9Y6M7 1214 aa13.08□□□□□ -0.32
VCAN-212ENST00000515397 MYO9BQ13459 2157 aa13.08□□□□□ -0.32
VCAN-212ENST00000515397 DHX15O43143 795 aaKnown RBP13.07□□□□□ -0.32
VCAN-212ENST00000515397 JAK2O60674 1132 aa13.07□□□□□ -0.32
VCAN-212ENST00000515397 GPR153Q6NV75 609 aa13.07□□□□□ -0.32
VCAN-212ENST00000515397 SERINC5Q86VE9 423 aa13.07□□□□□ -0.32
VCAN-212ENST00000515397 BLIDQ8IZY5 108 aa13.07□□□□□ -0.32
VCAN-212ENST00000515397 CCDC155Q8N6L0 562 aa13.07□□□□□ -0.32
VCAN-212ENST00000515397 TBCKQ8TEA7 893 aa13.07□□□□□ -0.32
VCAN-212ENST00000515397 AFAP1L1Q8TED9 768 aa13.07□□□□□ -0.32
VCAN-212ENST00000515397 LMBR1Q8WVP7 490 aa13.07□□□□□ -0.32
VCAN-212ENST00000515397 TRAPPC12Q8WVT3 735 aa13.07□□□□□ -0.32
VCAN-212ENST00000515397 CDX2Q99626 313 aaPredicted RBP13.07□□□□□ -0.32
VCAN-212ENST00000515397 ZNF577Q9BSK1 485 aa13.07□□□□□ -0.32
VCAN-212ENST00000515397 NKX2-4Q9H2Z4 354 aa13.07□□□□□ -0.32
VCAN-212ENST00000515397 SMARCAD1Q9H4L7 1026 aa13.07□□□□□ -0.32
VCAN-212ENST00000515397 SH3GLB2Q9NR46 395 aa13.07□□□□□ -0.32
VCAN-212ENST00000515397 ORC3Q9UBD5 711 aaPredicted RBP13.07□□□□□ -0.32
VCAN-212ENST00000515397 PCDHA4Q9UN74 947 aa13.07□□□□□ -0.32
VCAN-212ENST00000515397 YBX2Q9Y2T7 364 aaKnown RBP13.07□□□□□ -0.32
VCAN-212ENST00000515397 RSPH10B2B2RC85 870 aa13.06□□□□□ -0.32
VCAN-212ENST00000515397 IPO5O00410 1097 aaKnown RBP13.06□□□□□ -0.32
VCAN-212ENST00000515397 RSPH10BP0C881 870 aa13.06□□□□□ -0.32
VCAN-212ENST00000515397 FDPSP14324 419 aaKnown RBP13.06□□□□□ -0.32
VCAN-212ENST00000515397 INSRRP14616 1297 aa13.06□□□□□ -0.32
VCAN-212ENST00000515397 ATP2A2P16615 1042 aaKnown RBP13.06□□□□□ -0.32
VCAN-212ENST00000515397 ADAM17P78536 824 aa13.06□□□□□ -0.32
VCAN-212ENST00000515397 PPFIA1Q13136 1202 aa13.06□□□□□ -0.32
VCAN-212ENST00000515397 GRIN2CQ14957 1233 aa13.06□□□□□ -0.32
VCAN-212ENST00000515397 ANKRD1Q15327 319 aa13.06□□□□□ -0.32
VCAN-212ENST00000515397 GRIK4Q16099 956 aa13.06□□□□□ -0.32
VCAN-212ENST00000515397 SWSAP1Q6NVH7 229 aa13.06□□□□□ -0.32
VCAN-212ENST00000515397 OXER1Q8TDS5 423 aa13.06□□□□□ -0.32
VCAN-212ENST00000515397 MYLIPQ8WY64 445 aa13.06□□□□□ -0.32
VCAN-212ENST00000515397 TIFAQ96CG3 184 aa13.06□□□□□ -0.32
VCAN-212ENST00000515397 AZI2Q9H6S1 392 aa13.06□□□□□ -0.32
VCAN-212ENST00000515397 ERAP1Q9NZ08 941 aa13.06□□□□□ -0.32
VCAN-212ENST00000515397 NFASCO94856 1347 aa13.06□□□□□ -0.32
VCAN-212ENST00000515397 M0R2N6 131 aa13.05□□□□□ -0.32
VCAN-212ENST00000515397 BACH1O14867 736 aa13.05□□□□□ -0.32
VCAN-212ENST00000515397 LGR5O75473 907 aa13.05□□□□□ -0.32
VCAN-212ENST00000515397 CDKL5O76039 1030 aa13.05□□□□□ -0.32
VCAN-212ENST00000515397 TDP2O95551 362 aa13.05□□□□□ -0.32
VCAN-212ENST00000515397 HOXC8P31273 242 aa13.05□□□□□ -0.32
VCAN-212ENST00000515397 RFC2P35250 354 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms