RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 ZKSCAN5Q9Y2L8 839 aa7.23□□□□□ -1.25
HMGCS1-207ENST00000514610 B3GALT1Q9Y5Z6 326 aa7.23□□□□□ -1.25
HMGCS1-207ENST00000514610 ATP23Q9Y6H3 246 aa7.23□□□□□ -1.25
HMGCS1-207ENST00000514610 ACOT7O00154 380 aa7.22□□□□□ -1.25
HMGCS1-207ENST00000514610 SCDO00767 359 aa7.22□□□□□ -1.25
HMGCS1-207ENST00000514610 ABLIM1O14639 778 aa7.22□□□□□ -1.25
HMGCS1-207ENST00000514610 GAS7O60861 476 aa7.22□□□□□ -1.25
HMGCS1-207ENST00000514610 CLASP2O75122 1294 aaKnown RBP7.22□□□□□ -1.25
HMGCS1-207ENST00000514610 PTPN1P18031 435 aaKnown RBP7.22□□□□□ -1.25
HMGCS1-207ENST00000514610 PMLP29590 882 aa7.22□□□□□ -1.25
HMGCS1-207ENST00000514610 EVA1CP58658 441 aa7.22□□□□□ -1.25
HMGCS1-207ENST00000514610 TMEM62Q0P6H9 643 aa7.22□□□□□ -1.25
HMGCS1-207ENST00000514610 MIB1Q86YT6 1006 aa7.22□□□□□ -1.25
HMGCS1-207ENST00000514610 NLGN4XQ8N0W4 816 aa7.22□□□□□ -1.25
HMGCS1-207ENST00000514610 PRPF38AQ8NAV1 312 aaKnown RBP7.22□□□□□ -1.25
HMGCS1-207ENST00000514610 ALG3Q92685 438 aa7.22□□□□□ -1.25
HMGCS1-207ENST00000514610 DLG3Q92796 817 aa7.22□□□□□ -1.25
HMGCS1-207ENST00000514610 PUS7Q96PZ0 661 aaKnown RBP7.22□□□□□ -1.25
HMGCS1-207ENST00000514610 KRTAP9-9Q9BYP9 154 aa7.22□□□□□ -1.25
HMGCS1-207ENST00000514610 KRTAP9-4Q9BYQ2 154 aa7.22□□□□□ -1.25
HMGCS1-207ENST00000514610 SPTLC3Q9NUV7 552 aa7.22□□□□□ -1.25
HMGCS1-207ENST00000514610 FKBP9O95302 570 aa7.21□□□□□ -1.26
HMGCS1-207ENST00000514610 C4BPAP04003 597 aaKnown RBP7.21□□□□□ -1.26
HMGCS1-207ENST00000514610 CDK11BP21127 795 aaKnown RBP7.21□□□□□ -1.26
HMGCS1-207ENST00000514610 IBSPP21815 317 aaPredicted RBP7.21□□□□□ -1.26
HMGCS1-207ENST00000514610 IL2P60568 153 aa7.21□□□□□ -1.26
HMGCS1-207ENST00000514610 SRSF3P84103 164 aaKnown RBP7.21□□□□□ -1.26
HMGCS1-207ENST00000514610 STAT4Q14765 748 aa7.21□□□□□ -1.26
HMGCS1-207ENST00000514610 BTBD8Q5XKL5 378 aa7.21□□□□□ -1.26
HMGCS1-207ENST00000514610 FKBP9P1Q75LS8 142 aa7.21□□□□□ -1.26
HMGCS1-207ENST00000514610 FAM126BQ8IXS8 530 aa7.21□□□□□ -1.26
HMGCS1-207ENST00000514610 TTLL11Q8NHH1 800 aa7.21□□□□□ -1.26
HMGCS1-207ENST00000514610 USP7Q93009 1102 aa7.21□□□□□ -1.26
HMGCS1-207ENST00000514610 MCOLN1Q9GZU1 580 aa7.21□□□□□ -1.26
HMGCS1-207ENST00000514610 EPB41L4BQ9H329 900 aa7.21□□□□□ -1.26
HMGCS1-207ENST00000514610 IFT22Q9H7X7 185 aa7.21□□□□□ -1.26
HMGCS1-207ENST00000514610 CNTD2Q9H8S5 307 aa7.21□□□□□ -1.26
HMGCS1-207ENST00000514610 GOLGA2P5Q9HBQ8 144 aa7.21□□□□□ -1.26
HMGCS1-207ENST00000514610 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.2□□□□□ -1.26
HMGCS1-207ENST00000514610 TGM5O43548 720 aa7.2□□□□□ -1.26
HMGCS1-207ENST00000514610 BUB1BO60566 1050 aaPredicted RBP7.2□□□□□ -1.26
HMGCS1-207ENST00000514610 ASGR2P07307 311 aa7.2□□□□□ -1.26
HMGCS1-207ENST00000514610 STAT5AP42229 794 aa7.2□□□□□ -1.26
HMGCS1-207ENST00000514610 LSSP48449 732 aa7.2□□□□□ -1.26
HMGCS1-207ENST00000514610 IGBP1P78318 339 aa7.2□□□□□ -1.26
HMGCS1-207ENST00000514610 MLANAQ16655 118 aa7.2□□□□□ -1.26
HMGCS1-207ENST00000514610 PAN2Q504Q3 1202 aaKnown RBP7.2□□□□□ -1.26
HMGCS1-207ENST00000514610 AMIGO3Q86WK7 504 aa7.2□□□□□ -1.26
HMGCS1-207ENST00000514610 TRIM48Q8IWZ4 208 aa7.2□□□□□ -1.26
HMGCS1-207ENST00000514610 KIAA1958Q8N8K9 716 aa7.2□□□□□ -1.26
HMGCS1-207ENST00000514610 ATL2Q8NHH9 583 aa7.2□□□□□ -1.26
HMGCS1-207ENST00000514610 TTC1Q99614 292 aa7.2□□□□□ -1.26
HMGCS1-207ENST00000514610 DCP1AQ9NPI6 582 aaPredicted RBP7.2□□□□□ -1.26
HMGCS1-207ENST00000514610 RIC8BQ9NVN3 520 aa7.2□□□□□ -1.26
HMGCS1-207ENST00000514610 DTLQ9NZJ0 730 aa7.2□□□□□ -1.26
HMGCS1-207ENST00000514610 MBD1Q9UIS9 605 aaPredicted RBP7.2□□□□□ -1.26
HMGCS1-207ENST00000514610 NUB1Q9Y5A7 615 aa7.2□□□□□ -1.26
HMGCS1-207ENST00000514610 H7C1D1 291 aa7.19□□□□□ -1.26
HMGCS1-207ENST00000514610 PEX10O60683 326 aa7.19□□□□□ -1.26
HMGCS1-207ENST00000514610 LRG1P02750 347 aa7.19□□□□□ -1.26
HMGCS1-207ENST00000514610 SLC9A1P19634 815 aa7.19□□□□□ -1.26
HMGCS1-207ENST00000514610 THBS2P35442 1172 aa7.19□□□□□ -1.26
HMGCS1-207ENST00000514610 MC3RP41968 323 aa7.19□□□□□ -1.26
HMGCS1-207ENST00000514610 CDR1P51861 262 aa7.19□□□□□ -1.26
HMGCS1-207ENST00000514610 NCKAP1LP55160 1127 aa7.19□□□□□ -1.26
HMGCS1-207ENST00000514610 SART3Q15020 963 aaKnown RBP7.19□□□□□ -1.26
HMGCS1-207ENST00000514610 EP400NLQ6ZTU2 488 aa7.19□□□□□ -1.26
HMGCS1-207ENST00000514610 FAM26EQ8N5C1 309 aa7.19□□□□□ -1.26
HMGCS1-207ENST00000514610 ELF4Q99607 663 aaPredicted RBP7.19□□□□□ -1.26
HMGCS1-207ENST00000514610 EMC7Q9NPA0 242 aa7.19□□□□□ -1.26
HMGCS1-207ENST00000514610 KCNH7Q9NS40 1196 aa7.19□□□□□ -1.26
HMGCS1-207ENST00000514610 MCM8Q9UJA3 840 aa7.19□□□□□ -1.26
HMGCS1-207ENST00000514610 IRS2Q9Y4H2 1338 aa7.19□□□□□ -1.26
HMGCS1-207ENST00000514610 LRRC10BA6NIK2 292 aa7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 RASSF10A6NK89 507 aa7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 GPR39O43194 453 aa7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 ZEB2O60315 1214 aa7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 HIP1RO75146 1068 aa7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 C8BP07358 591 aa7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 FAHP16930 419 aa7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 GJA4P35212 333 aa7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 KPNA1P52294 538 aaPredicted RBP7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 KIF11P52732 1056 aa7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 ANAPC15P60006 121 aa7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 CR1LQ2VPA4 569 aa7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 CATSPEREQ5SY80 951 aa7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 OLFML2BQ68BL8 750 aa7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 LDHDQ86WU2 507 aa7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 ANKRD13AQ8IZ07 590 aa7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 EFHBQ8N7U6 833 aa7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 WDR66Q8TBY9 1149 aa7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 SYT3Q9BQG1 590 aa7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 SGPP1Q9BX95 441 aa7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 RBPJLQ9UBG7 517 aa7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 WASF3Q9UPY6 502 aa7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 APOBEC2Q9Y235 224 aaKnown RBP7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 PCDHA5Q9Y5H7 936 aa7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 SPO11Q9Y5K1 396 aa7.18□□□□□ -1.26
HMGCS1-207ENST00000514610 BRINP1O60477 761 aa7.17□□□□□ -1.26
HMGCS1-207ENST00000514610 ATF2P15336 505 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms