RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 LY6KQ17RY6 165 aa11.44□□□□□ -0.58
NEDD9-214ENST00000513989 CELF3Q5SZQ8 465 aaKnown RBP11.44□□□□□ -0.58
NEDD9-214ENST00000513989 CCDC62Q6P9F0 684 aa11.44□□□□□ -0.58
NEDD9-214ENST00000513989 C4orf32Q8N8J7 132 aa11.44□□□□□ -0.58
NEDD9-214ENST00000513989 KRI1Q8N9T8 703 aaKnown RBP11.44□□□□□ -0.58
NEDD9-214ENST00000513989 ERMNQ8TAM6 284 aa11.44□□□□□ -0.58
NEDD9-214ENST00000513989 ETNPPLQ8TBG4 499 aa11.44□□□□□ -0.58
NEDD9-214ENST00000513989 SLC5A5Q92911 643 aa11.44□□□□□ -0.58
NEDD9-214ENST00000513989 LENG9Q96B70 501 aa11.44□□□□□ -0.58
NEDD9-214ENST00000513989 TTC12Q9H892 705 aaPredicted RBP11.44□□□□□ -0.58
NEDD9-214ENST00000513989 PDGFCQ9NRA1 345 aa11.44□□□□□ -0.58
NEDD9-214ENST00000513989 DYNC1LI2O43237 492 aaPredicted RBP11.43□□□□□ -0.58
NEDD9-214ENST00000513989 ZEB2O60315 1214 aa11.43□□□□□ -0.58
NEDD9-214ENST00000513989 DUSP11O75319 330 aaKnown RBP11.43□□□□□ -0.58
NEDD9-214ENST00000513989 MARCKSP29966 332 aaPredicted RBP11.43□□□□□ -0.58
NEDD9-214ENST00000513989 SFNP31947 248 aa11.43□□□□□ -0.58
NEDD9-214ENST00000513989 LONP1P36776 959 aaKnown RBP11.43□□□□□ -0.58
NEDD9-214ENST00000513989 ADCYAP1R1P41586 468 aa11.43□□□□□ -0.58
NEDD9-214ENST00000513989 TECP42680 631 aa11.43□□□□□ -0.58
NEDD9-214ENST00000513989 ZNF746Q6NUN9 644 aaPredicted RBP11.43□□□□□ -0.58
NEDD9-214ENST00000513989 METTL7BQ6UX53 244 aa11.43□□□□□ -0.58
NEDD9-214ENST00000513989 CYFIP1Q7L576 1253 aa11.43□□□□□ -0.58
NEDD9-214ENST00000513989 SMAP1Q8IYB5 467 aaPredicted RBP11.43□□□□□ -0.58
NEDD9-214ENST00000513989 RDM1Q8NG50 284 aa11.43□□□□□ -0.58
NEDD9-214ENST00000513989 LEO1Q8WVC0 666 aaPredicted RBP11.43□□□□□ -0.58
NEDD9-214ENST00000513989 HAS1Q92839 578 aa11.43□□□□□ -0.58
NEDD9-214ENST00000513989 AK8Q96MA6 479 aa11.43□□□□□ -0.58
NEDD9-214ENST00000513989 SPATA33Q96N06 139 aa11.43□□□□□ -0.58
NEDD9-214ENST00000513989 KATNBL1Q9H079 304 aa11.43□□□□□ -0.58
NEDD9-214ENST00000513989 TMEM60Q9H2L4 133 aa11.43□□□□□ -0.58
NEDD9-214ENST00000513989 JPH1Q9HDC5 661 aaPredicted RBP11.43□□□□□ -0.58
NEDD9-214ENST00000513989 PKD2L1Q9P0L9 805 aa11.43□□□□□ -0.58
NEDD9-214ENST00000513989 SLC9A2Q9UBY0 812 aa11.43□□□□□ -0.58
NEDD9-214ENST00000513989 SAMM50Q9Y512 469 aa11.43□□□□□ -0.58
NEDD9-214ENST00000513989 SRPRBQ9Y5M8 271 aaKnown RBP11.43□□□□□ -0.58
NEDD9-214ENST00000513989 DDX49Q9Y6V7 483 aaKnown RBP11.43□□□□□ -0.58
NEDD9-214ENST00000513989 SPTBN5Q9NRC6 3674 aaKnown RBP11.42□□□□□ -0.58
NEDD9-214ENST00000513989 VWA3AA6NCI4 1184 aa11.42□□□□□ -0.58
NEDD9-214ENST00000513989 WNT7AO00755 349 aa11.42□□□□□ -0.58
NEDD9-214ENST00000513989 KPNA6O60684 536 aa11.42□□□□□ -0.58
NEDD9-214ENST00000513989 DKC1O60832 514 aaKnown RBP eCLIP11.42□□□□□ -0.58
NEDD9-214ENST00000513989 CUTAO60888 179 aa11.42□□□□□ -0.58
NEDD9-214ENST00000513989 ATP9AO75110 1047 aa11.42□□□□□ -0.58
NEDD9-214ENST00000513989 PSMD10O75832 226 aa11.42□□□□□ -0.58
NEDD9-214ENST00000513989 GGPS1O95749 300 aa11.42□□□□□ -0.58
NEDD9-214ENST00000513989 KCNA2P16389 499 aa11.42□□□□□ -0.58
NEDD9-214ENST00000513989 SMPD1P17405 629 aa11.42□□□□□ -0.58
NEDD9-214ENST00000513989 TXLNAP40222 546 aa11.42□□□□□ -0.58
NEDD9-214ENST00000513989 UBA7P41226 1012 aa11.42□□□□□ -0.58
NEDD9-214ENST00000513989 CPT1AP50416 773 aa11.42□□□□□ -0.58
NEDD9-214ENST00000513989 FXR2P51116 673 aaKnown RBP eCLIP11.42□□□□□ -0.581e-18■□□□□ 8.2
NEDD9-214ENST00000513989 JAK3P52333 1124 aa11.42□□□□□ -0.58
NEDD9-214ENST00000513989 SP2Q02086 613 aa11.42□□□□□ -0.58
NEDD9-214ENST00000513989 PPP2R5CQ13362 524 aa11.42□□□□□ -0.58
NEDD9-214ENST00000513989 PTPAQ15257 358 aa11.42□□□□□ -0.58
NEDD9-214ENST00000513989 LRIT3Q3SXY7 679 aa11.42□□□□□ -0.58
NEDD9-214ENST00000513989 MIS18BP1Q6P0N0 1132 aa11.42□□□□□ -0.58
NEDD9-214ENST00000513989 CLEC17AQ6ZS10 378 aa11.42□□□□□ -0.58
NEDD9-214ENST00000513989 ZNF579Q8NAF0 562 aaKnown RBP11.42□□□□□ -0.58
NEDD9-214ENST00000513989 SEPT1Q8WYJ6 367 aa11.42□□□□□ -0.58
NEDD9-214ENST00000513989 EMID1Q96A84 441 aaPredicted RBP11.42□□□□□ -0.58
NEDD9-214ENST00000513989 UIMC1Q96RL1 719 aa11.42□□□□□ -0.58
NEDD9-214ENST00000513989 LRWD1Q9UFC0 647 aa11.42□□□□□ -0.58
NEDD9-214ENST00000513989 DDX20Q9UHI6 824 aaKnown RBP11.42□□□□□ -0.58
NEDD9-214ENST00000513989 LCTP09848 1927 aa11.42□□□□□ -0.58
NEDD9-214ENST00000513989 WDR64B1ANS9 1081 aa11.41□□□□□ -0.58
NEDD9-214ENST00000513989 DDX39AO00148 427 aaKnown RBP11.41□□□□□ -0.58
NEDD9-214ENST00000513989 DHX15O43143 795 aaKnown RBP11.41□□□□□ -0.58
NEDD9-214ENST00000513989 SLC26A4O43511 780 aa11.41□□□□□ -0.58
NEDD9-214ENST00000513989 PPFIA4O75335 1185 aa11.41□□□□□ -0.58
NEDD9-214ENST00000513989 PSAPP07602 524 aa11.41□□□□□ -0.58
NEDD9-214ENST00000513989 UBA1P22314 1058 aaKnown RBP11.41□□□□□ -0.58
NEDD9-214ENST00000513989 SEMA3FQ13275 785 aa11.41□□□□□ -0.58
NEDD9-214ENST00000513989 ITGB3BPQ13352 177 aaPredicted RBP11.41□□□□□ -0.58
NEDD9-214ENST00000513989 KRT79Q5XKE5 535 aa11.41□□□□□ -0.58
NEDD9-214ENST00000513989 ADALQ6DHV7 355 aa11.41□□□□□ -0.58
NEDD9-214ENST00000513989 Q7L0L9 218 aa11.41□□□□□ -0.58
NEDD9-214ENST00000513989 MIER3Q7Z3K6 550 aa11.41□□□□□ -0.58
NEDD9-214ENST00000513989 TDHQ8IZJ6 230 aa11.41□□□□□ -0.58
NEDD9-214ENST00000513989 OR6J1Q8NGC5 347 aa11.41□□□□□ -0.58
NEDD9-214ENST00000513989 FTOQ9C0B1 505 aaKnown RBP eCLIP11.41□□□□□ -0.58
NEDD9-214ENST00000513989 AZI2Q9H6S1 392 aa11.41□□□□□ -0.58
NEDD9-214ENST00000513989 DISC1Q9NRI5 854 aa11.41□□□□□ -0.58
NEDD9-214ENST00000513989 FAM13BQ9NYF5 915 aa11.41□□□□□ -0.58
NEDD9-214ENST00000513989 PCDHA10Q9Y5I2 948 aa11.41□□□□□ -0.58
NEDD9-214ENST00000513989 ELP1O95163 1332 aa11.4□□□□□ -0.58
NEDD9-214ENST00000513989 CHMP2AO43633 222 aa11.4□□□□□ -0.58
NEDD9-214ENST00000513989 ARIH2O95376 493 aa11.4□□□□□ -0.58
NEDD9-214ENST00000513989 ACTR2P61160 394 aa11.4□□□□□ -0.58
NEDD9-214ENST00000513989 EPHA7Q15375 998 aa11.4□□□□□ -0.58
NEDD9-214ENST00000513989 DGKDQ16760 1214 aa11.4□□□□□ -0.58
NEDD9-214ENST00000513989 FAM160B1Q5W0V3 765 aa11.4□□□□□ -0.58
NEDD9-214ENST00000513989 HAUS3Q68CZ6 603 aa11.4□□□□□ -0.58
NEDD9-214ENST00000513989 NCAPH2Q6IBW4 605 aa11.4□□□□□ -0.58
NEDD9-214ENST00000513989 RNF180Q86T96 592 aa11.4□□□□□ -0.58
NEDD9-214ENST00000513989 TLK2Q86UE8 772 aa11.4□□□□□ -0.58
NEDD9-214ENST00000513989 ARRDC4Q8NCT1 418 aa11.4□□□□□ -0.58
NEDD9-214ENST00000513989 RASSF8Q8NHQ8 419 aa11.4□□□□□ -0.58
NEDD9-214ENST00000513989 PPTC7Q8NI37 304 aa11.4□□□□□ -0.58
NEDD9-214ENST00000513989 NEK9Q8TD19 979 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms