RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 POTEDQ86YR6 584 aa18.62■□□□□ 0.57
HMGCL-209ENST00000513148 PCSK9Q8NBP7 692 aaKnown RBP18.62■□□□□ 0.57
HMGCL-209ENST00000513148 GIMAP8Q8ND71 665 aaPredicted RBP18.62■□□□□ 0.57
HMGCL-209ENST00000513148 PPTC7Q8NI37 304 aa18.62■□□□□ 0.57
HMGCL-209ENST00000513148 EMID1Q96A84 441 aaPredicted RBP18.62■□□□□ 0.57
HMGCL-209ENST00000513148 SENP6Q9GZR1 1112 aaPredicted RBP18.62■□□□□ 0.57
HMGCL-209ENST00000513148 JPH1Q9HDC5 661 aaPredicted RBP18.62■□□□□ 0.57
HMGCL-209ENST00000513148 A6NJR5 290 aa18.62■□□□□ 0.57
HMGCL-209ENST00000513148 BAG4O95429 457 aaKnown RBP18.62■□□□□ 0.57
HMGCL-209ENST00000513148 GCFC2P16383 781 aaKnown RBP18.62■□□□□ 0.57
HMGCL-209ENST00000513148 MCM7P33993 719 aa18.62■□□□□ 0.57
HMGCL-209ENST00000513148 ACLYP53396 1101 aa18.62■□□□□ 0.57
HMGCL-209ENST00000513148 NUCB2P80303 420 aa18.62■□□□□ 0.57
HMGCL-209ENST00000513148 CXCL17Q6UXB2 119 aa18.62■□□□□ 0.57
HMGCL-209ENST00000513148 NAP1L4Q99733 375 aaKnown RBP18.62■□□□□ 0.57
HMGCL-209ENST00000513148 A0A1W2PQ45 241 aaPredicted RBP18.61■□□□□ 0.57
HMGCL-209ENST00000513148 A0A1W2PQY0 241 aa18.61■□□□□ 0.57
HMGCL-209ENST00000513148 ZEB2O60315 1214 aa18.61■□□□□ 0.57
HMGCL-209ENST00000513148 FOXD4L5Q5VV16 416 aaPredicted RBP18.61■□□□□ 0.57
HMGCL-209ENST00000513148 FOXD4L4Q8WXT5 416 aaPredicted RBP18.61■□□□□ 0.57
HMGCL-209ENST00000513148 MBOAT7Q96N66 472 aa18.61■□□□□ 0.57
HMGCL-209ENST00000513148 C11orf49Q9H6J7 331 aa18.61■□□□□ 0.57
HMGCL-209ENST00000513148 SLC9A2Q9UBY0 812 aa18.61■□□□□ 0.57
HMGCL-209ENST00000513148 MTMR6Q9Y217 621 aa18.61■□□□□ 0.57
HMGCL-209ENST00000513148 ZNF286BP0CG31 522 aa18.61■□□□□ 0.57
HMGCL-209ENST00000513148 CHMP4BP1P59074 171 aa18.61■□□□□ 0.57
HMGCL-209ENST00000513148 NKX3-2P78367 333 aa18.61■□□□□ 0.57
HMGCL-209ENST00000513148 ZNF174Q15697 407 aa18.61■□□□□ 0.57
HMGCL-209ENST00000513148 TTC38Q5R3I4 469 aa18.61■□□□□ 0.57
HMGCL-209ENST00000513148 NECAB2Q7Z6G3 386 aa18.61■□□□□ 0.57
HMGCL-209ENST00000513148 VTI1AQ96AJ9 217 aa18.61■□□□□ 0.57
HMGCL-209ENST00000513148 NFASCO94856 1347 aa18.6■□□□□ 0.57
HMGCL-209ENST00000513148 MOXD2PA6NHM9 499 aa18.6■□□□□ 0.57
HMGCL-209ENST00000513148 MARCH6O60337 910 aa18.6■□□□□ 0.57
HMGCL-209ENST00000513148 NEMFO60524 1076 aa18.6■□□□□ 0.57
HMGCL-209ENST00000513148 ZSCAN20P17040 1043 aaPredicted RBP18.6■□□□□ 0.57
HMGCL-209ENST00000513148 ATN1P54259 1190 aaPredicted RBP18.6■□□□□ 0.57
HMGCL-209ENST00000513148 DGKDQ16760 1214 aa18.6■□□□□ 0.57
HMGCL-209ENST00000513148 LRCH2Q5VUJ6 765 aa18.6■□□□□ 0.57
HMGCL-209ENST00000513148 ETNPPLQ8TBG4 499 aa18.6■□□□□ 0.57
HMGCL-209ENST00000513148 PRIMPOLQ96LW4 560 aa18.6■□□□□ 0.57
HMGCL-209ENST00000513148 GPR20Q99678 358 aa18.6■□□□□ 0.57
HMGCL-209ENST00000513148 TSEN34Q9BSV6 310 aaKnown RBP18.6■□□□□ 0.57
HMGCL-209ENST00000513148 PHF24Q9UPV7 400 aa18.6■□□□□ 0.57
HMGCL-209ENST00000513148 DHX15O43143 795 aaKnown RBP18.59■□□□□ 0.57
HMGCL-209ENST00000513148 GAS7O60861 476 aa18.59■□□□□ 0.57
HMGCL-209ENST00000513148 CAPN2P17655 700 aa18.59■□□□□ 0.57
HMGCL-209ENST00000513148 GTF2F1P35269 517 aaKnown RBP eCLIP18.59■□□□□ 0.57
HMGCL-209ENST00000513148 TOB1P50616 345 aaPredicted RBP18.59■□□□□ 0.57
HMGCL-209ENST00000513148 PURAQ00577 322 aaKnown RBP18.59■□□□□ 0.57
HMGCL-209ENST00000513148 PKP1Q13835 747 aa18.59■□□□□ 0.57
HMGCL-209ENST00000513148 CHMP2AO43633 222 aa18.59■□□□□ 0.57
HMGCL-209ENST00000513148 COL6A1P12109 1028 aa18.59■□□□□ 0.57
HMGCL-209ENST00000513148 PSMC6P62333 389 aa18.59■□□□□ 0.57
HMGCL-209ENST00000513148 UBE2Q1Q7Z7E8 422 aa18.59■□□□□ 0.57
HMGCL-209ENST00000513148 PPP1R13LQ8WUF5 828 aa18.59■□□□□ 0.57
HMGCL-209ENST00000513148 SLC5A5Q92911 643 aa18.59■□□□□ 0.57
HMGCL-209ENST00000513148 GLT1D1Q96MS3 346 aa18.59■□□□□ 0.57
HMGCL-209ENST00000513148 STARD7Q9NQZ5 370 aa18.59■□□□□ 0.57
HMGCL-209ENST00000513148 TBC1D22BQ9NU19 505 aa18.59■□□□□ 0.57
HMGCL-209ENST00000513148 POLR3EQ9NVU0 708 aa18.59■□□□□ 0.57
HMGCL-209ENST00000513148 TCEAL9Q9UHQ7 104 aa18.59■□□□□ 0.57
HMGCL-209ENST00000513148 PCDHB6Q9Y5E3 794 aa18.59■□□□□ 0.57
HMGCL-209ENST00000513148 A0A0U1RQG5 324 aaPredicted RBP18.58■□□□□ 0.56
HMGCL-209ENST00000513148 CCNE2O96020 404 aa18.58■□□□□ 0.56
HMGCL-209ENST00000513148 TCF7P36402 384 aaPredicted RBP18.58■□□□□ 0.56
HMGCL-209ENST00000513148 TRAPPC10P48553 1259 aa18.58■□□□□ 0.56
HMGCL-209ENST00000513148 ACTR2P61160 394 aa18.58■□□□□ 0.56
HMGCL-209ENST00000513148 CALCRLQ16602 461 aa18.58■□□□□ 0.56
HMGCL-209ENST00000513148 ZSCAN23Q3MJ62 389 aa18.58■□□□□ 0.56
HMGCL-209ENST00000513148 TRIM50Q86XT4 487 aa18.58■□□□□ 0.56
HMGCL-209ENST00000513148 TEKT3Q9BXF9 490 aa18.58■□□□□ 0.56
HMGCL-209ENST00000513148 KCNMB3Q9NPA1 279 aa18.58■□□□□ 0.56
HMGCL-209ENST00000513148 LETM1O95202 739 aaPredicted RBP18.57■□□□□ 0.56
HMGCL-209ENST00000513148 RESTQ13127 1097 aa18.57■□□□□ 0.56
HMGCL-209ENST00000513148 RILPL1Q5EBL4 403 aa18.57■□□□□ 0.56
HMGCL-209ENST00000513148 BRAPQ7Z569 592 aa18.57■□□□□ 0.56
HMGCL-209ENST00000513148 MYRIPQ8NFW9 859 aa18.57■□□□□ 0.56
HMGCL-209ENST00000513148 HAS1Q92839 578 aa18.57■□□□□ 0.56
HMGCL-209ENST00000513148 TMEM60Q9H2L4 133 aa18.57■□□□□ 0.56
HMGCL-209ENST00000513148 SAMM50Q9Y512 469 aa18.57■□□□□ 0.56
HMGCL-209ENST00000513148 ELP1O95163 1332 aa18.57■□□□□ 0.56
HMGCL-209ENST00000513148 PPFIA4O75335 1185 aa18.57■□□□□ 0.56
HMGCL-209ENST00000513148 LGALS2P05162 132 aa18.57■□□□□ 0.56
HMGCL-209ENST00000513148 TAF3Q5VWG9 929 aa18.57■□□□□ 0.56
HMGCL-209ENST00000513148 FAM173BQ6P4H8 233 aa18.57■□□□□ 0.56
HMGCL-209ENST00000513148 SEPT1Q8WYJ6 367 aa18.57■□□□□ 0.56
HMGCL-209ENST00000513148 RIT2Q99578 217 aa18.57■□□□□ 0.56
HMGCL-209ENST00000513148 MTG1Q9BT17 334 aaPredicted RBP18.57■□□□□ 0.56
HMGCL-209ENST00000513148 GSTTP1A0A1W2PQM5 241 aa18.56■□□□□ 0.56
HMGCL-209ENST00000513148 PSMD10O75832 226 aa18.56■□□□□ 0.56
HMGCL-209ENST00000513148 UNC45AQ9H3U1 944 aa18.56■□□□□ 0.56
HMGCL-209ENST00000513148 HOXD8P13378 290 aaPredicted RBP18.56■□□□□ 0.56
HMGCL-209ENST00000513148 KRT76Q01546 638 aa18.56■□□□□ 0.56
HMGCL-209ENST00000513148 FAM20AQ96MK3 541 aa18.56■□□□□ 0.56
HMGCL-209ENST00000513148 MYH15Q9Y2K3 1946 aa18.55■□□□□ 0.56
HMGCL-209ENST00000513148 TBX3O15119 743 aa18.55■□□□□ 0.56
HMGCL-209ENST00000513148 KPNA6O60684 536 aa18.55■□□□□ 0.56
HMGCL-209ENST00000513148 CABYRO75952 493 aa18.55■□□□□ 0.56
HMGCL-209ENST00000513148 TXKP42681 527 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms