RNA–Protein interactions for RNA: ENST00000512620.5

CAST-238, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-238	ENST00000512620	C8orf48	Q96LL4	319 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	EPB41L1	Q9H4G0	881 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	BCAS3	Q9H6U6	928 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	SP110	Q9HB58	689 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	PDLIM7	Q9NR12	457 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	OXSM	Q9NWU1	459 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
CAST-238	ENST00000512620	HCFC2	Q9Y5Z7	792 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620		X6R8D5	127 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	PHLDB1	Q86UU1	1377 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	CLIP1	P30622	1438 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	SMARCA4	P51532	1647 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	SLC12A8	A0AV02	714 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	ZC3H12D	A2A288	527 aa	Known RBP	4.6	□□□□□ -1.67
CAST-238	ENST00000512620	FITM1	A5D6W6	292 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	DVL2	O14641	736 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	PRKD3	O94806	890 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	ZBTB48	P10074	688 aa	Predicted RBP	4.6	□□□□□ -1.67
CAST-238	ENST00000512620	TBX4	P57082	545 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	LACTB	P83111	547 aa	Predicted RBP	4.6	□□□□□ -1.67
CAST-238	ENST00000512620	IRF9	Q00978	393 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	GRIN1	Q05586	938 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	SPIRE1	Q08AE8	756 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	TMEM132B	Q14DG7	1078 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	PPP2R5A	Q15172	486 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	SEC23A	Q15436	765 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	GPR19	Q15760	415 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	ABCB5	Q2M3G0	1257 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	STEAP3	Q658P3	488 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	EP400NL	Q6ZTU2	488 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	ANKLE2	Q86XL3	938 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	SPATS2	Q86XZ4	545 aa	Known RBP	4.6	□□□□□ -1.67
CAST-238	ENST00000512620	SPPL2C	Q8IUH8	684 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	CCDC146	Q8IYE0	955 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620		Q8N1Y9	231 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	OXR1	Q8N573	874 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	ASPSCR1	Q9BZE9	553 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	ACSL6	Q9UKU0	697 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	TRHDE	Q9UKU6	1024 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	DSE	Q9UL01	958 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	APOBEC2	Q9Y235	224 aa	Known RBP	4.6	□□□□□ -1.67
CAST-238	ENST00000512620	TELO2	Q9Y4R8	837 aa		4.6	□□□□□ -1.67
CAST-238	ENST00000512620	NUDT19	A8MXV4	375 aa		4.59	□□□□□ -1.67
CAST-238	ENST00000512620		H7C1D1	291 aa		4.59	□□□□□ -1.67
CAST-238	ENST00000512620	CUX2	O14529	1486 aa		4.59	□□□□□ -1.67
CAST-238	ENST00000512620	KIF3B	O15066	747 aa		4.59	□□□□□ -1.67
CAST-238	ENST00000512620	TGM5	O43548	720 aa		4.59	□□□□□ -1.67
CAST-238	ENST00000512620	LSS	P48449	732 aa		4.59	□□□□□ -1.67
CAST-238	ENST00000512620	KIF11	P52732	1056 aa		4.59	□□□□□ -1.67
CAST-238	ENST00000512620	CHRNE	Q04844	493 aa		4.59	□□□□□ -1.67
CAST-238	ENST00000512620	ZNF792	Q3KQV3	632 aa		4.59	□□□□□ -1.67
CAST-238	ENST00000512620	MROH9	Q5TGP6	573 aa		4.59	□□□□□ -1.67
CAST-238	ENST00000512620	FYB2	Q5VWT5	728 aa		4.59	□□□□□ -1.67
CAST-238	ENST00000512620	KIF18B	Q86Y91	864 aa		4.59	□□□□□ -1.67
CAST-238	ENST00000512620	NOSTRIN	Q8IVI9	506 aa		4.59	□□□□□ -1.67
CAST-238	ENST00000512620	WDR75	Q8IWA0	830 aa	Known RBP	4.59	□□□□□ -1.67
CAST-238	ENST00000512620	CMIP	Q8IY22	773 aa		4.59	□□□□□ -1.67
CAST-238	ENST00000512620	KIAA1958	Q8N8K9	716 aa		4.59	□□□□□ -1.67
CAST-238	ENST00000512620	MYLIP	Q8WY64	445 aa		4.59	□□□□□ -1.67
CAST-238	ENST00000512620	ORAI3	Q9BRQ5	295 aa		4.59	□□□□□ -1.67
CAST-238	ENST00000512620	YIPF4	Q9BSR8	244 aa		4.59	□□□□□ -1.67
CAST-238	ENST00000512620	BOC	Q9BWV1	1114 aa		4.59	□□□□□ -1.67
CAST-238	ENST00000512620	RNF32	Q9H0A6	362 aa		4.59	□□□□□ -1.67
CAST-238	ENST00000512620	RC3H2	Q9HBD1	1191 aa	Known RBP	4.59	□□□□□ -1.67
CAST-238	ENST00000512620	SLC6A20	Q9NP91	592 aa		4.59	□□□□□ -1.67
CAST-238	ENST00000512620	SRPK3	Q9UPE1	567 aa		4.59	□□□□□ -1.67
CAST-238	ENST00000512620	FANCI	Q9NVI1	1328 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	E2F8	A0AVK6	867 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	PLEKHD1	A6NEE1	506 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	KRIT1	O00522	736 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	SGSM2	O43147	1006 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	TSPAN6	O43657	245 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	ZEB2	O60315	1214 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	MT-CO1	P00395	513 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	HPX	P02790	462 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	GLI4	P10075	376 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	PTX3	P26022	381 aa	Predicted RBP	4.58	□□□□□ -1.68
CAST-238	ENST00000512620	NEK2	P51955	445 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	CORO7	P57737	925 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	LRRC41	Q15345	812 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	DDB1	Q16531	1140 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	NFE2	Q16621	373 aa	Predicted RBP	4.58	□□□□□ -1.68
CAST-238	ENST00000512620	HABP4	Q5JVS0	413 aa	Known RBP	4.58	□□□□□ -1.68
CAST-238	ENST00000512620	BROX	Q5VW32	411 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	CCSAP	Q6IQ19	270 aa	Predicted RBP	4.58	□□□□□ -1.68
CAST-238	ENST00000512620	OTOP1	Q7RTM1	612 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	MILR1	Q7Z6M3	343 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	NLRX1	Q86UT6	975 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	CABP7	Q86V35	215 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	C11orf74	Q86VG3	221 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	CLRN3	Q8NCR9	226 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	AGBL5	Q8NDL9	886 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	NLGN2	Q8NFZ4	835 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	SHISA4	Q96DD7	197 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	ELF4	Q99607	663 aa	Predicted RBP	4.58	□□□□□ -1.68
CAST-238	ENST00000512620	PUS7L	Q9H0K6	701 aa	Known RBP	4.58	□□□□□ -1.68
CAST-238	ENST00000512620	TOMM22	Q9NS69	142 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	RIC8B	Q9NVN3	520 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	SLC52A1	Q9NWF4	448 aa		4.58	□□□□□ -1.68
CAST-238	ENST00000512620	MYOT	Q9UBF9	498 aa		4.58	□□□□□ -1.68

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