RNA–Protein interactions for RNA: ENST00000510557.5

LIN54-209, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2 BASIC

Gene LIN54, Length 2,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-209ENST00000510557 CLSTN1O94985 981 aa21.07■□□□□ 0.96
LIN54-209ENST00000510557 GNA14O95837 355 aa21.07■□□□□ 0.96
LIN54-209ENST00000510557 PLEKP08567 350 aaPredicted RBP21.07■□□□□ 0.96
LIN54-209ENST00000510557 SNHG28P0DPA3 235 aa21.07■□□□□ 0.96
LIN54-209ENST00000510557 MATR3P43243 847 aaKnown RBP eCLIP21.07■□□□□ 0.968e-6■□□□□ 9.7
LIN54-209ENST00000510557 MAGEA1P43355 309 aa21.07■□□□□ 0.96
LIN54-209ENST00000510557 FKBP3Q00688 224 aaKnown RBP21.07■□□□□ 0.96
LIN54-209ENST00000510557 CEP57Q86XR8 500 aa21.07■□□□□ 0.96
LIN54-209ENST00000510557 SYN2Q92777 582 aaPredicted RBP21.07■□□□□ 0.96
LIN54-209ENST00000510557 NT5C3AQ9H0P0 336 aa21.07■□□□□ 0.96
LIN54-209ENST00000510557 A0A1B0GUA9 196 aa21.07■□□□□ 0.96
LIN54-209ENST00000510557 SLC26A4O43511 780 aa21.07■□□□□ 0.96
LIN54-209ENST00000510557 NEBLO76041 1014 aa21.07■□□□□ 0.96
LIN54-209ENST00000510557 TDP2O95551 362 aa21.07■□□□□ 0.96
LIN54-209ENST00000510557 MDH1P40925 334 aaKnown RBP21.07■□□□□ 0.96
LIN54-209ENST00000510557 CCDC181Q5TID7 509 aa21.07■□□□□ 0.96
LIN54-209ENST00000510557 C6orf89Q6UWU4 347 aa21.07■□□□□ 0.96
LIN54-209ENST00000510557 LRRC55Q6ZSA7 311 aa21.07■□□□□ 0.96
LIN54-209ENST00000510557 CERKQ8TCT0 537 aa21.07■□□□□ 0.96
LIN54-209ENST00000510557 RBM17Q96I25 401 aaKnown RBP21.07■□□□□ 0.96
LIN54-209ENST00000510557 CCDC43Q96MW1 224 aaKnown RBP21.07■□□□□ 0.96
LIN54-209ENST00000510557 DDX20Q9UHI6 824 aaKnown RBP21.07■□□□□ 0.96
LIN54-209ENST00000510557 BTAF1O14981 1849 aa21.06■□□□□ 0.96
LIN54-209ENST00000510557 FRMPD2Q68DX3 1309 aaPredicted RBP21.06■□□□□ 0.96
LIN54-209ENST00000510557 KIF3CO14782 793 aa21.06■□□□□ 0.96
LIN54-209ENST00000510557 PAFAH1B1P43034 410 aa21.06■□□□□ 0.96
LIN54-209ENST00000510557 C8orf74Q6P047 294 aa21.06■□□□□ 0.96
LIN54-209ENST00000510557 PDXDC1Q6P996 788 aa21.06■□□□□ 0.96
LIN54-209ENST00000510557 COA7Q96BR5 231 aa21.06■□□□□ 0.96
LIN54-209ENST00000510557 TANGO6Q9C0B7 1094 aa21.06■□□□□ 0.96
LIN54-209ENST00000510557 RNF14Q9UBS8 474 aa21.06■□□□□ 0.96
LIN54-209ENST00000510557 KDM3AQ9Y4C1 1321 aa21.06■□□□□ 0.96
LIN54-209ENST00000510557 MARCH6O60337 910 aa21.06■□□□□ 0.96
LIN54-209ENST00000510557 SEC24CP53992 1094 aa21.06■□□□□ 0.96
LIN54-209ENST00000510557 MRPS25P82663 173 aaKnown RBP21.06■□□□□ 0.96
LIN54-209ENST00000510557 CYB5D1Q6P9G0 228 aa21.06■□□□□ 0.96
LIN54-209ENST00000510557 BAP1Q92560 729 aa21.06■□□□□ 0.96
LIN54-209ENST00000510557 CUL5Q93034 780 aa21.06■□□□□ 0.96
LIN54-209ENST00000510557 GPR101Q96P66 508 aaPredicted RBP21.06■□□□□ 0.96
LIN54-209ENST00000510557 NOX5Q96PH1 765 aa21.06■□□□□ 0.96
LIN54-209ENST00000510557 OSBPL9Q96SU4 736 aa21.06■□□□□ 0.96
LIN54-209ENST00000510557 COL4A3BPQ9Y5P4 624 aa21.06■□□□□ 0.96
LIN54-209ENST00000510557 CAPN6Q9Y6Q1 641 aa21.06■□□□□ 0.96
LIN54-209ENST00000510557 POTEMA6NI47 508 aa21.05■□□□□ 0.96
LIN54-209ENST00000510557 ZNF233A6NK53 670 aa21.05■□□□□ 0.96
LIN54-209ENST00000510557 E7EVH7 732 aa21.05■□□□□ 0.96
LIN54-209ENST00000510557 BBOX1O75936 387 aa21.05■□□□□ 0.96
LIN54-209ENST00000510557 MOCS3O95396 460 aa21.05■□□□□ 0.96
LIN54-209ENST00000510557 PAX7P23759 505 aa21.05■□□□□ 0.96
LIN54-209ENST00000510557 CLNS1AP54105 237 aaKnown RBP21.05■□□□□ 0.96
LIN54-209ENST00000510557 SLC9C1Q4G0N8 1177 aa21.05■□□□□ 0.96
LIN54-209ENST00000510557 PTF1AQ7RTS3 328 aa21.05■□□□□ 0.96
LIN54-209ENST00000510557 CD302Q8IX05 232 aa21.05■□□□□ 0.96
LIN54-209ENST00000510557 IQCKQ8N0W5 287 aa21.05■□□□□ 0.96
LIN54-209ENST00000510557 CEP63Q96MT8 703 aa21.05■□□□□ 0.96
LIN54-209ENST00000510557 CEP72Q9P209 647 aa21.05■□□□□ 0.96
LIN54-209ENST00000510557 DDX25Q9UHL0 483 aaKnown RBP21.05■□□□□ 0.96
LIN54-209ENST00000510557 EPHB6O15197 1021 aa21.04■□□□□ 0.96
LIN54-209ENST00000510557 TTLL1O95922 423 aa21.04■□□□□ 0.96
LIN54-209ENST00000510557 IBSPP21815 317 aaPredicted RBP21.04■□□□□ 0.96
LIN54-209ENST00000510557 TNNI2P48788 182 aa21.04■□□□□ 0.96
LIN54-209ENST00000510557 GLE1Q53GS7 698 aaKnown RBP21.04■□□□□ 0.96
LIN54-209ENST00000510557 IFT20Q8IY31 132 aa21.04■□□□□ 0.96
LIN54-209ENST00000510557 GLT8D2Q9H1C3 349 aa21.04■□□□□ 0.96
LIN54-209ENST00000510557 SWAP70Q9UH65 585 aa21.04■□□□□ 0.96
LIN54-209ENST00000510557 HMGB1P1B2RPK0 211 aaPredicted RBP21.04■□□□□ 0.96
LIN54-209ENST00000510557 RBAK-RBAKDNI3L0D1 243 aa21.04■□□□□ 0.96
LIN54-209ENST00000510557 CRY2Q49AN0 593 aa21.04■□□□□ 0.96
LIN54-209ENST00000510557 C1orf131Q8NDD1 294 aaKnown RBP21.04■□□□□ 0.96
LIN54-209ENST00000510557 SGSM3Q96HU1 749 aa21.04■□□□□ 0.96
LIN54-209ENST00000510557 ATP6V1G3Q96LB4 118 aa21.04■□□□□ 0.96
LIN54-209ENST00000510557 TRIM6Q9C030 488 aaPredicted RBP21.04■□□□□ 0.96
LIN54-209ENST00000510557 MLXIPQ9HAP2 919 aa21.04■□□□□ 0.96
LIN54-209ENST00000510557 POLD4Q9HCU8 107 aa21.04■□□□□ 0.96
LIN54-209ENST00000510557 NKRFO15226 690 aaKnown RBP eCLIP21.03■□□□□ 0.963e-9■■□□□ 13.5
LIN54-209ENST00000510557 SLC8A1P32418 973 aa21.03■□□□□ 0.96
LIN54-209ENST00000510557 ASTE1Q2TB18 679 aaPredicted RBP21.03■□□□□ 0.96
LIN54-209ENST00000510557 FUKQ8N0W3 1084 aa21.03■□□□□ 0.96
LIN54-209ENST00000510557 SMCR8Q8TEV9 937 aaPredicted RBP21.03■□□□□ 0.96
LIN54-209ENST00000510557 PANK4Q9NVE7 773 aa21.03■□□□□ 0.96
LIN54-209ENST00000510557 PCDHA12Q9UN75 941 aa21.03■□□□□ 0.96
LIN54-209ENST00000510557 SUGT1Q9Y2Z0 365 aa21.03■□□□□ 0.96
LIN54-209ENST00000510557 MYO3BQ8WXR4 1341 aa21.03■□□□□ 0.96
LIN54-209ENST00000510557 C10orf71Q711Q0 1435 aa21.03■□□□□ 0.96
LIN54-209ENST00000510557 IGKV6D-41A0A0C4DH26 115 aa21.03■□□□□ 0.96
LIN54-209ENST00000510557 SERPING1P05155 500 aa21.03■□□□□ 0.96
LIN54-209ENST00000510557 ADRA2BP18089 450 aa21.03■□□□□ 0.96
LIN54-209ENST00000510557 CLK2P49760 499 aaKnown RBP21.03■□□□□ 0.96
LIN54-209ENST00000510557 GABPAQ06546 454 aa21.03■□□□□ 0.96
LIN54-209ENST00000510557 ZNF543Q08ER8 600 aa21.03■□□□□ 0.96
LIN54-209ENST00000510557 COASYQ13057 564 aa21.03■□□□□ 0.96
LIN54-209ENST00000510557 PAK2Q13177 524 aa21.03■□□□□ 0.96
LIN54-209ENST00000510557 HYIQ5T013 277 aa21.03■□□□□ 0.96
LIN54-209ENST00000510557 GPATCH4Q5T3I0 446 aaKnown RBP21.03■□□□□ 0.96
LIN54-209ENST00000510557 SFMBT2Q5VUG0 894 aa21.03■□□□□ 0.96
LIN54-209ENST00000510557 PRR5LQ6MZQ0 368 aa21.03■□□□□ 0.96
LIN54-209ENST00000510557 CCDC65Q8IXS2 484 aa21.03■□□□□ 0.96
LIN54-209ENST00000510557 CYFIP2Q96F07 1278 aa21.03■□□□□ 0.96
LIN54-209ENST00000510557 ATP6V0A4Q9HBG4 840 aa21.03■□□□□ 0.96
LIN54-209ENST00000510557 NHSQ6T4R5 1651 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms