RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 SP4Q02446 784 aa13.36□□□□□ -0.27
HMGXB3-203ENST00000510472 RBL2Q08999 1139 aa13.36□□□□□ -0.27
HMGXB3-203ENST00000510472 LRIT3Q3SXY7 679 aa13.36□□□□□ -0.27
HMGXB3-203ENST00000510472 Q4G0T1 1027 aa13.36□□□□□ -0.27
HMGXB3-203ENST00000510472 FAM47CQ5HY64 1035 aa13.36□□□□□ -0.27
HMGXB3-203ENST00000510472 KRT25Q7Z3Z0 450 aa13.36□□□□□ -0.27
HMGXB3-203ENST00000510472 TRIM50Q86XT4 487 aa13.36□□□□□ -0.27
HMGXB3-203ENST00000510472 CCDC83Q8IWF9 413 aa13.36□□□□□ -0.27
HMGXB3-203ENST00000510472 C7orf31Q8N865 590 aa13.36□□□□□ -0.27
HMGXB3-203ENST00000510472 DHX38Q92620 1227 aaKnown RBP13.36□□□□□ -0.27
HMGXB3-203ENST00000510472 PPP1R12CQ9BZL4 782 aa13.36□□□□□ -0.27
HMGXB3-203ENST00000510472 WNT8AQ9H1J5 351 aa13.36□□□□□ -0.27
HMGXB3-203ENST00000510472 RNPEPQ9H4A4 650 aa13.36□□□□□ -0.27
HMGXB3-203ENST00000510472 SLC9A2Q9UBY0 812 aa13.36□□□□□ -0.27
HMGXB3-203ENST00000510472 PITPNM1O00562 1244 aa13.35□□□□□ -0.27
HMGXB3-203ENST00000510472 MSH4O15457 936 aa13.35□□□□□ -0.27
HMGXB3-203ENST00000510472 CSF2RAP15509 400 aa13.35□□□□□ -0.27
HMGXB3-203ENST00000510472 ACTR2P61160 394 aa13.35□□□□□ -0.27
HMGXB3-203ENST00000510472 ZNF200P98182 395 aaPredicted RBP13.35□□□□□ -0.27
HMGXB3-203ENST00000510472 SETQ01105 290 aaPredicted RBP13.35□□□□□ -0.27
HMGXB3-203ENST00000510472 FPGSQ05932 587 aa13.35□□□□□ -0.27
HMGXB3-203ENST00000510472 NONOQ15233 471 aaKnown RBP eCLIP13.35□□□□□ -0.27
HMGXB3-203ENST00000510472 SHHQ15465 462 aa13.35□□□□□ -0.27
HMGXB3-203ENST00000510472 PTGISQ16647 500 aa13.35□□□□□ -0.27
HMGXB3-203ENST00000510472 TRIM71Q2Q1W2 868 aaKnown RBP13.35□□□□□ -0.27
HMGXB3-203ENST00000510472 PRR16Q569H4 304 aa13.35□□□□□ -0.27
HMGXB3-203ENST00000510472 EARS2Q5JPH6 523 aaKnown RBP13.35□□□□□ -0.27
HMGXB3-203ENST00000510472 C9orf50Q5SZB4 431 aa13.35□□□□□ -0.27
HMGXB3-203ENST00000510472 MOXD1Q6UVY6 613 aa13.35□□□□□ -0.27
HMGXB3-203ENST00000510472 ABHD15Q6UXT9 468 aa13.35□□□□□ -0.27
HMGXB3-203ENST00000510472 SDF4Q9BRK5 362 aa13.35□□□□□ -0.27
HMGXB3-203ENST00000510472 TBC1D22BQ9NU19 505 aa13.35□□□□□ -0.27
HMGXB3-203ENST00000510472 MMP1P03956 469 aa13.34□□□□□ -0.27
HMGXB3-203ENST00000510472 SMIM10L2AP0DMW4 78 aa13.34□□□□□ -0.27
HMGXB3-203ENST00000510472 SMIM10L2BP0DMW5 78 aa13.34□□□□□ -0.27
HMGXB3-203ENST00000510472 CHMP4BP1P59074 171 aa13.34□□□□□ -0.27
HMGXB3-203ENST00000510472 NR5A1Q13285 461 aa13.34□□□□□ -0.27
HMGXB3-203ENST00000510472 PTK7Q13308 1070 aa13.34□□□□□ -0.27
HMGXB3-203ENST00000510472 GPNMBQ14956 572 aa13.34□□□□□ -0.27
HMGXB3-203ENST00000510472 UTP14CQ5TAP6 766 aaKnown RBP13.34□□□□□ -0.27
HMGXB3-203ENST00000510472 RASIP1Q5U651 963 aa13.34□□□□□ -0.27
HMGXB3-203ENST00000510472 TRAF7Q6Q0C0 670 aa13.34□□□□□ -0.27
HMGXB3-203ENST00000510472 B3GNT9Q6UX72 402 aa13.34□□□□□ -0.27
HMGXB3-203ENST00000510472 PLPPR4Q7Z2D5 763 aa13.34□□□□□ -0.27
HMGXB3-203ENST00000510472 TMEM199Q8N511 208 aa13.34□□□□□ -0.27
HMGXB3-203ENST00000510472 SLC5A5Q92911 643 aa13.34□□□□□ -0.27
HMGXB3-203ENST00000510472 WNT8BQ93098 351 aa13.34□□□□□ -0.27
HMGXB3-203ENST00000510472 ZNF577Q9BSK1 485 aa13.34□□□□□ -0.27
HMGXB3-203ENST00000510472 SMARCAD1Q9H4L7 1026 aa13.34□□□□□ -0.27
HMGXB3-203ENST00000510472 EMSYQ7Z589 1322 aa13.34□□□□□ -0.27
HMGXB3-203ENST00000510472 BTBD18B2RXH4 712 aa13.33□□□□□ -0.28
HMGXB3-203ENST00000510472 SOX1O00570 391 aaPredicted RBP13.33□□□□□ -0.28
HMGXB3-203ENST00000510472 ST18O60284 1047 aa13.33□□□□□ -0.28
HMGXB3-203ENST00000510472 TDP2O95551 362 aa13.33□□□□□ -0.28
HMGXB3-203ENST00000510472 IQCF3P0C7M6 154 aa13.33□□□□□ -0.28
HMGXB3-203ENST00000510472 CCL23P55773 120 aa13.33□□□□□ -0.28
HMGXB3-203ENST00000510472 PPIGQ13427 754 aaKnown RBP eCLIP13.33□□□□□ -0.28
HMGXB3-203ENST00000510472 INF2Q27J81 1249 aa13.33□□□□□ -0.28
HMGXB3-203ENST00000510472 TMEM240Q5SV17 173 aa13.33□□□□□ -0.28
HMGXB3-203ENST00000510472 KRT40Q6A162 431 aa13.33□□□□□ -0.28
HMGXB3-203ENST00000510472 PPP4R3AQ6IN85 833 aa13.33□□□□□ -0.28
HMGXB3-203ENST00000510472 ZNF746Q6NUN9 644 aaPredicted RBP13.33□□□□□ -0.28
HMGXB3-203ENST00000510472 SERINC5Q86VE9 423 aa13.33□□□□□ -0.28
HMGXB3-203ENST00000510472 CAGE1Q8TC20 777 aa13.33□□□□□ -0.28
HMGXB3-203ENST00000510472 TMX3Q96JJ7 454 aa13.33□□□□□ -0.28
HMGXB3-203ENST00000510472 RIT2Q99578 217 aa13.33□□□□□ -0.28
HMGXB3-203ENST00000510472 IL23AQ9NPF7 189 aa13.33□□□□□ -0.28
HMGXB3-203ENST00000510472 SETD4Q9NVD3 440 aa13.33□□□□□ -0.28
HMGXB3-203ENST00000510472 ERAP1Q9NZ08 941 aa13.33□□□□□ -0.28
HMGXB3-203ENST00000510472 ZNF215Q9UL58 517 aaPredicted RBP13.33□□□□□ -0.28
HMGXB3-203ENST00000510472 LTBP2Q14767 1821 aa13.32□□□□□ -0.28
HMGXB3-203ENST00000510472 CCDC194A0A1B0GVG4 234 aa13.32□□□□□ -0.28
HMGXB3-203ENST00000510472 C17orf102A2RUQ5 167 aa13.32□□□□□ -0.28
HMGXB3-203ENST00000510472 FAM205CA6NFA0 338 aa13.32□□□□□ -0.28
HMGXB3-203ENST00000510472 PSMD10O75832 226 aa13.32□□□□□ -0.28
HMGXB3-203ENST00000510472 KRT2P35908 639 aa13.32□□□□□ -0.28
HMGXB3-203ENST00000510472 MCM2P49736 904 aa13.32□□□□□ -0.28
HMGXB3-203ENST00000510472 STAT5BP51692 787 aa13.32□□□□□ -0.28
HMGXB3-203ENST00000510472 HMGN5P82970 282 aaKnown RBP13.32□□□□□ -0.28
HMGXB3-203ENST00000510472 BFSP2Q13515 415 aa13.32□□□□□ -0.28
HMGXB3-203ENST00000510472 PIK3AP1Q6ZUJ8 805 aa13.32□□□□□ -0.28
HMGXB3-203ENST00000510472 NEK8Q86SG6 692 aa13.32□□□□□ -0.28
HMGXB3-203ENST00000510472 ETNPPLQ8TBG4 499 aa13.32□□□□□ -0.28
HMGXB3-203ENST00000510472 AFAP1L1Q8TED9 768 aa13.32□□□□□ -0.28
HMGXB3-203ENST00000510472 UIMC1Q96RL1 719 aa13.32□□□□□ -0.28
HMGXB3-203ENST00000510472 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.32□□□□□ -0.287e-8■■■□□ 15.9
HMGXB3-203ENST00000510472 NRCAMQ92823 1304 aa13.32□□□□□ -0.28
HMGXB3-203ENST00000510472 MBLAC1A4D2B0 266 aaPredicted RBP13.31□□□□□ -0.28
HMGXB3-203ENST00000510472 TREHO43280 583 aa13.31□□□□□ -0.28
HMGXB3-203ENST00000510472 SLC37A4O43826 429 aa13.31□□□□□ -0.28
HMGXB3-203ENST00000510472 ACRP10323 421 aa13.31□□□□□ -0.28
HMGXB3-203ENST00000510472 CKBP12277 381 aa13.31□□□□□ -0.28
HMGXB3-203ENST00000510472 ATP4AP20648 1035 aa13.31□□□□□ -0.28
HMGXB3-203ENST00000510472 SLC26A2P50443 739 aa13.31□□□□□ -0.28
HMGXB3-203ENST00000510472 KRT76Q01546 638 aa13.31□□□□□ -0.28
HMGXB3-203ENST00000510472 PLCB4Q15147 1175 aa13.31□□□□□ -0.28
HMGXB3-203ENST00000510472 MARCH8Q5T0T0 291 aa13.31□□□□□ -0.28
HMGXB3-203ENST00000510472 ZNF365Q70YC5 407 aa13.31□□□□□ -0.28
HMGXB3-203ENST00000510472 RPAINQ86UA6 219 aa13.31□□□□□ -0.28
HMGXB3-203ENST00000510472 CCDC60Q8IWA6 550 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms